Wheat EST-SSRs for tracing chromosome segments from a wide range of grass species

Plant Breeding

Volumn 126, Issue 3, 2007, Pages 251-258

  Zhang, L Y ^a   Bernard, M ^a   Ravel, C ^a   Balfourier, F ^a   Leroy, P ^a   Feuillet, C ^a   Sourdille, P ^a  

^a CEMAGREF   (France)

Author keywords

Genetic diversity; Markers; Microsatellites; Relatives; Triticum aestivum

Indexed keywords

AEGILOPS LONGISSIMA; AEGILOPS TAUSCHII; SECALE CEREALE; TRITICEAE; TRITICUM AESTIVUM; TRITICUM AESTIVUM SUBSP. COMPACTUM; TRITICUM TURGIDUM SUBSP. DURUM; ZEA MAYS;

EID: 34248192905     PISSN: 01799541     EISSN: 14390523     Source Type: Journal    
DOI: 10.1111/j.1439-0523.2007.01293.x     Document Type: Article

References (32)

1. Anderson, J. A., G. A. Churchill, J. E. Autrique, S. D. Tanksley M. E. Sorrells, 1993 : Optimizing parental selection for genetic linkage maps. Genome 36, 181 186.
2. Blanco, A., M. P. Bellomo, A. Cenci, C. De Giovanni, R. D'Ovidio, E. Iacono, B. Laddomada, M. A. Pagnotta, E. Porceddu A. Sciancalepore, 1998 : A genetic linkage map of durum wheat. Theor. Appl. Genet. 97, 721 728.
3. Botstein, D., R. L. White, M. Skolnick R. W. Davis, 1980 : Construction of a genetic linkage map in man using restriction fragment length polymorphisms. Am. J. Hum. Genet. 32, 314 331.
4. Bryan, G. J., A. J. Collins, P. Stephenson, A. Orry, J. B. Smith M. D. Gale, 1997 : Isolation and characterization of microsatellites from hexaploid bread wheat. Theor. Appl. Genet. 94, 367 377.
5. Chao, S., P. J. Sharp, A. J. Worland, E. J. Warham, R. M. D. Koebner M. D. Gale, 1989 : RFLP-based genetic maps of wheat homoeologous group 7 chromosomes. Theor. Appl. Genet. 78, 495 504.
6. Eujayl, I., M. E. Sorrells, M. Baum, P. Wolters W. Powell, 2002 : Isolation of EST-derived microsatellite markers for genotyping the A and B genomes of wheat. Theor. Appl. Genet. 104, 399 407.
7. Gupta, P. K., S. Rustig, S. Sharma, R. Singh, N. Kumar H. S. Balyan, 2003 : Transferable EST-SSR markers for the study of polymorphism and genetic diversity in bread wheat. Mol. Gen. Genomics 270, 315 323.
8. Guyomarc'h, H., P. Sourdille, G. Charmet, K. J. Edwards M. Bernard, 2002a : Characterization of polymorphic microsatellite markers from Aegilops tauchii and transferability to the D-genome of bread wheat. Theor. Appl. Genet. 104, 1164 1172.
9. Guyomarc'h, H., P. Sourdille, K. J. Edwards M. Bernard, 2002b : Studies of the transferability of microsatellites derived from Triticum tauschii to hexaploid wheat and to diploid related species using amplification, hybridization and sequence comparisons. Theor. Appl. Genet. 105, 736 744.
10. Holton, T. A., J. T. Christopher, L. McClure, N. Harker R. J. Henry, 2002 : Identification and mapping of polymorphic SSR markers from expressed gene sequences of barley and wheat. Mol. Breeding 9, 63 71.
11. Kema, G. H. J., W. Lange C. H. Silfhout, 1995 : Differential suppression of stripe rust resistance in synthetic wheat hexaploids derived from Triticum turgidum subsp. dicoccoides and Aegilops squarrosa. Phytopathology 85, 425 429.
12. Kuleung, C., P. S. Baenziger I. Dweikat, 2003 : Transferability of SSR markers among wheat, rye and triticale. Theor. Appl. Genet. 108, 1147 1150.
13. Lage, J., B. Skovmand S. B. Andersen, 2001 : Field evaluation of Russian wheat aphid, Homoptera: Aphididae: resistance in Triticum dicoccum derived synthetic hexaploid wheats. Abstract, Annual Meeting, ESA, San Diego, CA, USA, December 2001.
14. Lage, J., M. L. Warburton, J. Crossa, B. Skovmand S. B. Andersen, 2003 : Assessment of genetic diversity in synthetic hexaploid wheats and their Triticum dicoccum and Aegilops tauschii parents using AFLPs and agronomic traits. Euphytica 134, 305 317.
15. Ma, H., R. P. Singh A. Mujeeb-Kazi, 1995 : Resistance to stripe rust in Triticum turgidum, T. tauschii and their synthetic hexaploids. Euphytica 82, 117 124.
16. Mujeeb-Kazi, A., A. Cortes, V. Rosas, S. Cano, J. Sanchez, L. Juarez R. Delgado, 2001 : Genetic Diversity for Improving Scab Resistance in Wheat. Proc. Warren E Kronstad Symp., CIMMYT, Mexico, pp. 126 129.
17. Nicot, N., V. Chiquet, B. Gandon, L. Amilhat, F. Legeai, P. Leroy, M. Bernard P. Sourdille, 2004 : Study of simple sequence repeat, SSR: markers from wheat expressed sequence tags. ESTs. Theor. Appl. Genet. 109, 800 805.
18. Peng, H. J. N. V. Lapitan, 2005 : Characterization of EST-derived microsatellites in the wheat genome and development of eSSR markers. Funct. Integr. Genomics 5, 80 96.
19. Plaschke, J., M. Ganal M. Röder, 1995 : Detection of genetic diversity in closely related bread wheat using microsatellite markers. Theor. Appl. Genet. 91, 1001 1007.
20. Röder, M. S., J. Plaschke, S. U. König, A. Börner, M. E. Sorrells, S. D. Tanksley M. W. Ganal, 1995 : Abundance, variability and chromosomal location of microsatellites in wheat. Mol. Gen. Genomics 246, 327 333.
21. Röder, M. S., V. Korsun, K. Wendehake, J. Plaschke, M. H. Tixier, P. Leroy M. W. Ganal, 1998 : A microsatellite map of the wheat genome. Genetics 149, 2007 2023.
22. Roussel, V., J. Koenig, M. Beckert F. Balfourier, 2004 : Molecular diversity in French bread wheat accessions related to temporal trends and breeding programmes. Theor. Appl. Genet. 108, 920 930.
23. Sourdille, P., M. Tavaud, G. Charmet M. Bernard, 2001 : Transferability of wheat microsatellites to diploid Triticeae species carrying the A, B and D genomes. Theor. Appl. Genet. 103, 346 352.
24. Thiel, T., W. Michalek, R. K. Varshney A. Graner, 2003 : Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley, Hordeum vulgare. Theor. Appl. Genet. 106, 411 422.
25. Thuillet, A. C., T. Bataillon, P. Sourdille J. David, 2004 : Factors affecting polymorphism at microsatellite loci in bread wheat, Triticum aestivum L. Thell: effects of mutation processes and physical distance from the centromere. Theor. Appl. Genet. 108, 368 377.
26. Tixier, M. H., P. Sourdille, G. Charmet, G. Gay, C. Jaby, T. Cadalen, S. Bernard, P. Nicolas M. Bernard, 1998 : Detection of QTLs for crossability in wheat using a doubled-haploid population. Theor. Appl. Genet. 97, 1076 1082.
27. Villareal, R. L., K. Sayre, O. Banuelos A. Mujeeb-Kazi, 2001 : Registration of four synthetic hexaploid wheat, Triticum turgidum/Aegilops tauschii: germplasm lines tolerant to waterlogging. Crop Sci. 41, 274.
28. Wang, M. L., N. A. Barkley, J. K. Yu, R. E. Dean, M. L. Newman, M. E. Sorrells G. A. Pederson, 2005 : Transfer of simple sequence repeat, SSR: markers from major cereal crops to minor grass species for germplasm characterization and evaluation. Plant Genet. Resour. 3, 45 57.
29. Yu, J. K., M. La Rota, R. V. Kantety M. E. Sorrells, 2004a : EST derived SSR markers for comparative mapping in wheat and rice. Mol. Gen. Genomics 271, 742 751.
30. Yu, J. K., T. M. Dake, S. Singh, D. Benscher, W. L. Li, B. Gill M. E. Sorrells, 2004b : Development and mapping of EST-derived simple sequence repeat markers for hexaploid wheat. Genome 47, 805 818.
31. Zhang, L. Y., M. Bernard, P. Leroy, C. Feuillet P. Sourdille, 2005a : High transferability of bread wheat EST-derived SSRs to other cereals. Theor. Appl. Genet. 111, 677 687.
32. Zhang, P., S. Dreisigacker, A. E. Melchinger, M. van Ginkel, D. Hoisington M. L. Warburton, 2005b : Quantifying novel sequence variation in CIMMYT synthetic hexaploid wheats and their backcross-derived lines using SSR markers. Mol. Breeding 15, 1 10.