Genes differentially expressed in Theobroma cacao associated with resistance to witches' broom disease caused by Crinipellis perniciosa

Molecular Plant Pathology

Volumn 8, Issue 3, 2007, Pages 279-292

  Leal Jr , Gildemberg Amorim ^a   Albuquerque, Paulo S B ^b   Figueira, Antonio ^a  

^a UNIVERSITY OF SÃO PAULO   (Brazil)

^b ESJOH   (Brazil)

Author keywords

[No Author keywords available]

Indexed keywords

BASIDIOMYCOTA; CRINIPELLIS PERNICIOSA; THEOBROMA CACAO;

EID: 34247363713     PISSN: 14646722     EISSN: 13643703     Source Type: Journal    
DOI: 10.1111/j.1364-3703.2007.00393.x     Document Type: Article

References (59)

1. Albuquerque, P.S.B. and Figueira, A. (2004) Genetic mapping and identification of genomic regions associated with witches' broom resistance, derived from alternative sources from the Brazilian Amazon (CAB genotypes). INGENIC Newsletter, 9, 39-42.
2. Andebrhan, T., Figueira A., Yamada. M.M., Cascardo J. and Furtek D.B. (1999) Molecular fingerprinting suggests two primary outbreaks of witches' broom disease (Crinipellis perniciosa) of Theobroma cacao in Bahia, Brazil. Eur. J. Plant Pathol. 105, 167-175.
3. Aneja, M. and Gianfagna, T. (2001) Induction and accumulation of caffeine in young, actively growing leaves of cocoa (Theobroma cacao L.) by wounding or infection with Crinipellis perniciosa. Physiol. Mol. Plant Pathol. 59, 13-16.
4. Bailey, B.A., Bae, H., Strem, M.D., Mayolo, G.A., Guiltinan, M.J., Verica, J.A., Maximova, S.N. and Bowers, J.H. (2005) Developmental expression of stress response genes in Theobroma cacao leaves and their response to Nep1 treatment and a compatible infection by Phytophthora megakarya. Plant Physiol. Biochem. 43, 611-622.
5. Basse, C.W. (2005) Dissecting defense-related and developmental transcriptional responses of maize during Ustilago maydis infection and subsequent tumor formation. Plant Physiol. 138, 1774-1784.
6. Benitez, Y., Botella, M.A., Trapero, A., Alsalimiya, M., Caballero, J.L., Dorado, G. and Blanco, J.M. (2005) Molecular analysis of the interaction between Olea europaea and the biotrophic fungus Spilocaea oleagina. Mol. Plant Pathol. 6, 425-438.
7. Bertini, L., Cascone, A., Tucci, M., D'Amore, R., Di Berardino, I., Buonocore, V., Caporale, C. and Caruso, C. (2006) Molecular and functional analysis of new members of the wheat PR4 gene family. Biol. Chem. 387, 1101-1111.
8. Bowers, J.H., Bailey, B.A., Hebbar, P.K., Sanogo, S. and Lumsden, R.D. (2001) The impact of plant diseases on world chocolate production. Plant Health Prog. doi: 10.1094/PHP-2001-0709-01-RV.
9. Brownlee, H.E., Hedger, J.N. and Scott, I.M. (1992) Effect of a range of procyanidins on the cocoa pathogens Crinipellis perniciosa. Physiol. Mol. Plant Pathol. 40, 227-232.
10. Chapple, C. (1998) Molecular-genetic analysis of plant cytochrome p450-dependent monooxygenases. Ann. Rev. Plant Physiol. Plant Mol. Biol. 49, 311-343.
11. Chittoor, J.M., Leach, J.E. and White, F.F. (1997) Differential induction of a peroxidase gene family during infection of rice by Xanthomonas oryzae pv. oryzae. Mol. Plant-Microbe Interact. 10, 861-871.
12. Collinge, D.B., Kragh, K.M., Mikkelsen, J.D., Nielsen, K.K., Rasmussen, U. and Vad, K. (1993) Plant chitinases. Plant J. 3, 31-40.
13. Degenhardt, J., Al-Masri, A.N., Kürkcüoglu, S., Szankowski, I. and Gau, A.E. (2004) Characterization by suppression subtractive hybridization of transcripts that are differentially expressed in leaves of apple scab-resistant and susceptible cultivars of Malus domestica. Mol. Gen. Genomics, 273, 3226-3335.
14. Delgado, J.C. and Cook, A.A. (1976) Nuclear condition of the basidia basidiospore and mycelial of Marasmius perniciosus. Can. J. Bot. 54, 66-72.
15. Diatchenko, L., Lau, Y.F.C., Campbell, A.P., Chenchik, A., Moqadam, F., Huang, B., Lukyanov, L., Lukyanov, L., Gurskaya, N., Sverdlov, E.D. and Sieber, P. (1996) Suppression subtractive hybridization: a method for generating differentially or tissue-specific cDNA probes and libraries. Proc. Natl Acad. Sci. USA, 93, 6025-6030.
16. Ewing, B. and Green, P. (1998) Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res. 8, 186-194.
17. Ewing, B., Hillier, L., Wendl, M. and Green, P. (1998) Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res. 8, 175-185.
18. Faleiro, F.G., Queiroz, V.T., Lopes, U.V., Guimarães, C.T., Pires, J.L., Yamada, M.M., Araújo, I.S., Pereira, M.G., Schnell, R., de Souza, G.A., Ferreira, C.F., Barros, E.G. and Moreira, M.A. (2006) Mapping QTLs for witches' broom (Crinipellis perniciosa) resistance in cacao (Theobroma cacao L.). Euphytica, 149, 227-235.
19. Fernandez, D., Santos, P., Agostini, C., Bom, M.C., Petitot, A.S., Silva, M.C., Guerra-Guimarães, L., Ribeiro, A., Argout, X. and Nicole, M. (2004) Coffee (Coffea arabica L.) genes early expressed during infection by the rust fungus (Hemileia vastatrix). Mol. Plant Pathol. 5, 527-536.
20. Frias, G.A. and Purdy, L.H. (1995) An inoculation method for evaluating resistance of cocoa to Crinipellis perniciosa. Plant Dis. 79, 787-791.
21. Frias, G.A., Purdy, L.H. and Schmidt, R.A. (1991) Infection biology of Crinipellis perniciosa on vegetative flushes of cacao. Plant Dis. 75, 552-556.
22. Gesteira, A.S., Micheli, F., Ferreira, C.F. and Cascardo, J.M.C. (2003) Isolation and purification of functional total RNA from different organs of cacao tree during its interaction with the pathogen Crinipellis perniciosa. Biotechniques, 35, 494-496.
23. Guerreiro Filho, O. and Mazzafera, P. (2000) Caffeine does not protect coffee against the leaf miner Perileucoptera coffeella. J. Chem. Ecol. 26, 1447-1464.
24. Guerreiro Filho, O. and Mazzafera, P. (2003) Caffeine and resistance of coffee to the berry borer Hypothenemus hampei (coleoptera: scolytidae). J. Agric. Food Chem. 51, 6987-6991.
25. Guilleroux. M. and Osbourn, A. (2004) Gene expression during infection of wheat roots by the 'take-all' fungus Gaeumannomyces graminis. Mol. Plant Pathol. 5, 203-216.
26. Hohnjec, N., Küster, H., Albus, U., Frosch, S.C., Becker, J.D., Pühler, A., Perlick, A.M. and Frühling, M. (2000) The broad bean nodulin VfENOD18 is a member of a novel family of plant proteins with homologies to the bacterial MJ0577 superfamily. Mol. Gen. Genet. 264, 241-250.
27. Holter, N.S., Mitra, M., Maritan, M., Cieplak, M., Bnavar, J.R. and Fedoroff, N.V. (2000) Fundamental patterns underlying gene expression profiles: Simplicity from complexity. Proc. Natl Acad. Sci. USA, 97, 8409-8414.
28. Huang, X. and Madan, A. (1999) CAP3: a DNA sequence assembly program. Genome Res. 9, 868-877.
29. Jones, P.G., Allaway, D., Gilmour, D.M., Harris, C., Rankin, D., Retzel, E.R. and Jones, C.A. (2002) Gene discovery and microarray analysis of cacao (Theobroma cacao L.) varieties. Planta, 216, 255-264.
30. Kauffmann, S., Legrand, M., Geoffroy, P. and Fritig, B. (1987) Biological function of 'pathogenesis-related' proteins: four PR proteins of tobacco have 1,3-β-glucanase activity. EMBO J. 6, 3209-3212.
31. Kawaoka, A., Matsunaga, E., Endo, S., Kondo, S., Yoshida, K., Shinmyo, A. and Ebinuma, H. (2003) Ectopic expression of a horseradish peroxidase enhances growth rate and increases oxidative stress resistance in hybrid aspen. Plant Physiol. 132, 1177-1185.
32. Kazan, K., Schenk, P.M., Wilson, I. and Manners, J.M. (2001) DNA microarrays: new tools in the analysis of plant defence response. Mol. Plant Pathol. 2, 177-185.
33. Kerk, D., Bulgrien, J., Smith, D.W. and Gribskov, M. (2003) Arabidopsis proteins containing similarity to the universal stress protein domain of bacteria. Plant Physiol. 131, 1209-1219.
34. Laker, H.A., Sreenivasan, T.N. and Raj-Kumar, D. (1988) Present status of witches' broom disease of cocoa in Trinidad. Trop. Pest Manage. 34, 318-323.
35. Lee, S.C., Kim, S.H., An, S.H., Yi, S.Y. and Hwang, B.K. (2006) Identification and functional expression of the pepper pathogen induced gene, CAPIP2, involved in disease resistance and drought and salt stress tolerance. Plant Mol. Biol. 62, 151-164.
36. ΔΔCT method. Methods, 25, 402-408.
37. Logemann, E., Wu, S.C., Schroder, J., Schmelzer, E., Somssich, I.E. and Hahlbrock, K. (1995) Gene activation by UV light, fungal elicitor or fungal infection in Petroselinum crispum is correlated with repression of cell cycle-related genes. Plant J. 8, 865-876.
38. Lu, G., Jantasuriyarat, C., Zhou, B. and Wang, G.L. (2004) Isolation and characterization of novel defense response genes involved in compatible and incompatible interactions between rice and Magnaporthe grisea. Theor. Appl. Genet. 108, 525-534.
39. Ng, M. and Yanofsky, M.F. (2001) Activation of the arabidopsis B class homeotic genes by APETALA1. Plant Cell 13, 739-753.
40. Podila, G.K., Zheng, J., Balasubramanian, S., Sundaram, S., Hiremaths, S., Brand, J.H. and Hymes, M.J. (2002) Fungal gene expression in early symbiotic interactions between Laccaria bicolor and red pine. Plant Soil, 244, 117-128.
41. Purdy, L.H. and Schimdt, R.A. (1996) Status of cacao witches broom: biology, epidemiology, and management. Annu. Rev. Phytopathol. 34, 573-594.
42. Quiroga, M., Guerrero, C., Botella, M.A., Barceló, A., Amaya, I., Medina, M.I., Alonso, F.J., de Forchetti, S.M., Tigier, H. and Valpuesta, V. (2000) A tomato peroxidase involved in the synthesis of lignin and suberin. Plant Physiol. 122, 1119-1127.
43. Ross, J.R., Nam, K.H., D'Auria, J.C. and Pichersky, E. (1999) S-adenosyl-1-methionine: salicylic acid carboxyl methyltransferase, an enzyme involved in floral scent production and plant defense, represents a new class of plant methyltransferases. Arch. Biochem. Biophys. 367, 9-16.
44. Sasaki, K., Iwai, T., Hiraga, S., Kuroda, K., Seo, S., Mitsuhara, I., Miyasaka, A., Iwano, M., Ito, H., Matsui, H. and Ohashi, Y. (2004) Ten rice peroxidases redundantly respond to multiple stresses including infection with rice blast fungus. Plant Cell Physiol. 45, 1442-1452.
45. Sauter, M., Rzewuski, G., Marwedel, T. and Lorbiecke, R. (2002) The novel ethylene-regulated gene OsUsp1 from rice encodes a member of a plant protein family related to prokaryotic universal stress proteins. J. Exp. Bot. 53, 2325-2331.
46. Scarpari, L.M., Meinhardt, L.W., Mazzafera, P., Pomella, A.W.V., Schiavinato, M.A., Cascardo, J.C.M. and Pereira, G.A.G. (2005) Biochemical changes during the development of witches' broom: the most important disease of cocoa in Brazil caused by Crinipellis perniciosa. J. Exp. Bot. 56, 865-877.
47. Seo, H.S., Song, J.T., Cheong, J., Lee, Y., Lee, Y., Hwang, I., Lee, L.S. and Choi, Y.D. (2001) Jasmonic acid carboxyl methyltransferase: a key enzyme for jasmonate-regulated plant responses. Proc. Natl Acad. Sci. USA, 98, 4788-4793.
48. Sereno, M.L., Albuquerque, P.S.B., Vencovsky, R. and Figueira, A. (2006) Genetic diversity and natural population structure of cacao (Theobroma cacao L.) from the Brazilian Amazon evaluated by microsatellite markers. Conserv. Genet. 7, 13-24.
49. Silva, S.D.V.M., Luz, E.D.M.N. and Matsuoka, K. (1998) Seleção de variáveis na avaliação de progênies de cacaueiro (Theobroma cacao) quanto a resistência a Crinipellis perniciosa. Agrotrópica, 10, 87-94.
50. Silva, S.D.V.M. and Matsuoka, K. (1999) Histologia da interação Crinipellis perniciosa em cacaueiros suscetível e resistente à vassoura-de-bruxa. Fitopatol. Brasileira, 24, 54-59.
51. Somssich, I.E. and Hahlbrock, K. (1998) Pathogen defence in plants-a paradigm of biological complexity. Trends Plant Sci. 3, 86-90.
52. Takemoto, D., Doke, N. and Kawakita, K. (2001) Characterization of elicitor-inducible tobacco genes isolated by differential hybridization. J. Gen. Plant Pathol. 67, 89-96.
53. Tao, Y., Xie, Z., Chen, W., Glazebrook, J., Chang, H.-S., Han, B., Zhu, T., Zou, G. and Katagiri, F. (2003) Quantitative nature of Arabidopsis responses during compatible and incompatible interactions with the bacterial pathogen Pseudomonas syringae. Plant Cell, 15, 317-330.
54. Thara, V.K., Fellers, J.P. and Zhou, J.M. (2003) In planta induced genes of Puccinia triticina. Mol. Plant Pathol. 4, 51-56.
55. Verica, J.A., Maximova, S.N., Strem, M.D., Carlson, J.E., Bailey, B.A. and Guiltinan, M.J. (2004) Isolation of ESTs from cacao (Theobroma cacao L.) leaves treated with inducers of the defense response. Plant Cell Rep. 23, 404-413.
56. Voiblet, C., Duplessis, S., Encelot, N. and Martin, F. (2001) Identification of symbiosis-regulated genes in Eucalyptus globulus-Pisolithus tinctorius ectomycorrhiza by differential hybridization of arrayed cDNAs. Plant J. 25, 181-191.
57. Wheeler, B.E.J. (1985) The growth of Crinipellis perniciosa in living and dead cocoa tissue. In: Developmental Biology of Higher Fungi (Moore, D., Casselton, L.A., Wood, D.A. and Frankland, J.C., eds), pp. 103-116. Cambridge: Cambridge University Press.
58. Winkel-Shirley, B. (2001) Flavonoid biosynthesis. A colorful model for genetics, biochemistry, cell biology, and biotechnology. Plant Physiol. 126, 485-493.
59. Zuo, K., Wang, J., Wu, W., Chai, Y., Sun, X. and Tang, K. (2005) Identification and characterization of differentially expressed ESTs of Gossypium barbadense infected by Verticillium dahliae with suppression subtractive hybridization. Mol. Biol. 39, 191-199.