메뉴 건너뛰기




Volumn 131, Issue 3, 2003, Pages 1209-1219

Arabidopsis proteins containing similarity to the universal stress protein domain of bacteria

Author keywords

[No Author keywords available]

Indexed keywords

ESCHERICHIA COLI; MOLECULAR STRUCTURE; STRESS ANALYSIS;

EID: 0037353618     PISSN: 00320889     EISSN: None     Source Type: Journal    
DOI: 10.1104/pp.102.016006     Document Type: Article
Times cited : (88)

References (31)
  • 2
    • 0030310296 scopus 로고
    • Fast protein fold recognition via sequence to structure alignment and contact capacity potentials
    • L Hunter, T E Klein, eds. World Scientific Publishing, Singapore
    • Alexandrov NN, Nussinov R, Zimmer RM (1995) Fast protein fold recognition via sequence to structure alignment and contact capacity potentials. In L Hunter, T E Klein, eds, Pacific Symposium on Biocomputing '96. World Scientific Publishing, Singapore, pp 53-72
    • (1995) Pacific Symposium on Biocomputing '96 , pp. 53-72
    • Alexandrov, N.N.1    Nussinov, R.2    Zimmer, R.M.3
  • 4
    • 0036643477 scopus 로고    scopus 로고
    • Monophyly of class I aminoacyl tRNA synthetase, USPA, ETFP, photolyase, and PP-ATPase nucleotide-binding domains: Implications for protein evolution in the RNA world
    • Aravind L, Anantharaman V, Koonin EV (2002) Monophyly of class I aminoacyl tRNA synthetase, USPA, ETFP, photolyase, and PP-ATPase nucleotide-binding domains: implications for protein evolution in the RNA world. Proteins Struct Funct Genet 48: 1-14
    • (2002) Proteins Struct Funct Genet , vol.48 , pp. 1-14
    • Aravind, L.1    Anantharaman, V.2    Koonin, E.V.3
  • 5
    • 0034708216 scopus 로고    scopus 로고
    • The U box is a modified RING finger: A common domain in ubiquitination
    • Aravind L, Koonin EV (2000) The U box is a modified RING finger: a common domain in ubiquitination. Curr Biol 10:R132-R134
    • (2000) Curr Biol , vol.10
    • Aravind, L.1    Koonin, E.V.2
  • 6
    • 0002759539 scopus 로고
    • Unsupervised learning of multiple motifs in biopolymers using EM
    • Bailey TL, Elkan C (1995) Unsupervised learning of multiple motifs in biopolymers using EM. Machine Learning 21: 51-80
    • (1995) Machine Learning , vol.21 , pp. 51-80
    • Bailey, T.L.1    Elkan, C.2
  • 7
    • 0031877016 scopus 로고    scopus 로고
    • Combining evidence using p-values: Application to sequence homology searches
    • Bailey TL, Gribskov M (1998) Combining evidence using p-values: application to sequence homology searches. Bioinformatics 14: 48-54
    • (1998) Bioinformatics , vol.14 , pp. 48-54
    • Bailey, T.L.1    Gribskov, M.2
  • 9
    • 0030093114 scopus 로고    scopus 로고
    • A flexible search technique based on generalized profiles
    • Bucher P, Karplus K, Moeri N, Hofmann K (1996) A flexible search technique based on generalized profiles. Comput Chem 20: 3-24
    • (1996) Comput Chem , vol.20 , pp. 3-24
    • Bucher, P.1    Karplus, K.2    Moeri, N.3    Hofmann, K.4
  • 10
    • 0029901637 scopus 로고    scopus 로고
    • Inferring phylogenies from protein sequences by parsimony, distance, and likelihood methods
    • Felsenstein J (1996) Inferring phylogenies from protein sequences by parsimony, distance, and likelihood methods. Methods Enzymol 266: 418-426
    • (1996) Methods Enzymol , vol.266 , pp. 418-426
    • Felsenstein, J.1
  • 11
    • 0031555475 scopus 로고    scopus 로고
    • The universal stress protein, UspA, of Escherichia coli is phosphorylated in response to stasis
    • Freestone P, Nystrom T, Trinei M, Norris V (1997) The universal stress protein, UspA, of Escherichia coli is phosphorylated in response to stasis. J Mol Biol 274: 318-324
    • (1997) J Mol Biol , vol.274 , pp. 318-324
    • Freestone, P.1    Nystrom, T.2    Trinei, M.3    Norris, V.4
  • 14
    • 0029665409 scopus 로고    scopus 로고
    • Identification of sequence patterns with profile analysis
    • Gribskov M, Veretnik S (1996) Identification of sequence patterns with profile analysis. Methods Enzymol 266: 198-211
    • (1996) Methods Enzymol , vol.266 , pp. 198-211
    • Gribskov, M.1    Veretnik, S.2
  • 16
    • 0033757457 scopus 로고    scopus 로고
    • The broad bean nodulin VfENOD18 is a member of a novel family of plant proteins with homologies to the bacterial MJ0577 superfamily
    • Hohnjec N, Kuster H, Albus U, Frosch SC, Becker JD, Puhler A, Perlick AM, Fruhling M (2000) The broad bean nodulin VfENOD18 is a member of a novel family of plant proteins with homologies to the bacterial MJ0577 superfamily. Mol Gen Genet 264: 241-250
    • (2000) Mol Gen Genet , vol.264 , pp. 241-250
    • Hohnjec, N.1    Kuster, H.2    Albus, U.3    Frosch, S.C.4    Becker, J.D.5    Puhler, A.6    Perlick, A.M.7    Fruhling, M.8
  • 17
    • 0034595501 scopus 로고    scopus 로고
    • Enhanced genome annotation using structural profiles in the program 3D-PSSM
    • Kelley LA, MacCallum RM, Sternberg MJE (2000) Enhanced genome annotation using structural profiles in the program 3D-PSSM. J Mol Biol 299: 499-520
    • (2000) J Mol Biol , vol.299 , pp. 499-520
    • Kelley, L.A.1    MacCallum, R.M.2    Sternberg, M.J.E.3
  • 19
    • 0026356891 scopus 로고
    • Predicting coiled coils from protein sequences
    • Lupas A, Van Dyke M, Stock J (1991) Predicting coiled coils from protein sequences. Science 252: 1162-1164
    • (1991) Science , vol.252 , pp. 1162-1164
    • Lupas, A.1    Van Dyke, M.2    Stock, J.3
  • 20
    • 0026526320 scopus 로고
    • Cloning, mapping and nucleotide sequencing of a gene encoding a universal stress protein in Escherichia coli
    • Nystrom T, Neidhardt FC (1992) Cloning, mapping and nucleotide sequencing of a gene encoding a universal stress protein in Escherichia coli. Mol Microbiol 6: 3187-3198
    • (1992) Mol Microbiol , vol.6 , pp. 3187-3198
    • Nystrom, T.1    Neidhardt, F.C.2
  • 21
    • 0027323041 scopus 로고
    • Isolation and properties of a mutant of Escherichia coli with an insertional inactivation of the uspA gene, which encodes a universal stress protein
    • Nystrom T, Neidhardt FC (1993) Isolation and properties of a mutant of Escherichia coli with an insertional inactivation of the uspA gene, which encodes a universal stress protein. J Bacteriol 175: 3949-3956
    • (1993) J Bacteriol , vol.175 , pp. 3949-3956
    • Nystrom, T.1    Neidhardt, F.C.2
  • 22
    • 0028225734 scopus 로고
    • Expression and role of the universal stress protein, UspA, of Escherichia coli during growth arrest
    • Nystrom T, Neidhardt FC (1994) Expression and role of the universal stress protein, UspA, of Escherichia coli during growth arrest. Mol Microbiol 11: 537-544
    • (1994) Mol Microbiol , vol.11 , pp. 537-544
    • Nystrom, T.1    Neidhardt, F.C.2
  • 23
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 24
    • 0003946154 scopus 로고    scopus 로고
    • Protein kinases in the plant defense response
    • Sessa G, Martin GB (2000) Protein kinases in the plant defense response. Adv Bot Res 32: 379-398
    • (2000) Adv Bot Res , vol.32 , pp. 379-398
    • Sessa, G.1    Martin, G.B.2
  • 25
    • 0035659117 scopus 로고    scopus 로고
    • Structure of the universal stress protein of Haemophilus influenzae
    • Sousa MC, McKay DB (2001) Structure of the universal stress protein of Haemophilus influenzae. Structure 9: 1135-1141
    • (2001) Structure , vol.9 , pp. 1135-1141
    • Sousa, M.C.1    McKay, D.B.2
  • 26
    • 0032693327 scopus 로고    scopus 로고
    • Functional genomics: Expression analysis of Escherichia coli growing on minimal and rich media
    • Tao H, Bausch C, Richmond C, Blattner FR, Conway T (1999) Functional genomics: expression analysis of Escherichia coli growing on minimal and rich media. J Bacteriol 181: 6425-6440
    • (1999) J Bacteriol , vol.181 , pp. 6425-6440
    • Tao, H.1    Bausch, C.2    Richmond, C.3    Blattner, F.R.4    Conway, T.5
  • 27
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25: 4876-4882
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 28
    • 0030987407 scopus 로고    scopus 로고
    • MultiCoil: A program for predicting two-and three-stranded coiled coils
    • Wolf E, Kim PS, Berger B (1997) MultiCoil: a program for predicting two-and three-stranded coiled coils. Protein Sci 6: 1179-1189
    • (1997) Protein Sci , vol.6 , pp. 1179-1189
    • Wolf, E.1    Kim, P.S.2    Berger, B.3
  • 29
    • 2642688801 scopus 로고
    • Molecular cloning and characterization of 9 cDNAs for genes that are responsive to desiccation in Arabidopsis thaliana: Sequence analysis of one cDNA clone that encodes a putative transmembrane channel protein
    • Yamaguchi-Shinozaki K, Koizumi M, Urao S, Shinozaki K (1992) Molecular cloning and characterization of 9 cDNAs for genes that are responsive to desiccation in Arabidopsis thaliana: sequence analysis of one cDNA clone that encodes a putative transmembrane channel protein. Plant Cell Physiol 33: 217-224
    • (1992) Plant Cell Physiol , vol.33 , pp. 217-224
    • Yamaguchi-Shinozaki, K.1    Koizumi, M.2    Urao, S.3    Shinozaki, K.4
  • 31
    • 0032809896 scopus 로고    scopus 로고
    • Ethylene-regulated gene expression in tomato fruit: Characterization of novel ethylene-responsive and ripening-related genes isolated by differential display
    • Zegzouti H, Jones B, Frasse P, Marty C, Maitre B, Latche A, Pech J-C, Bouzayen M (1999) Ethylene-regulated gene expression in tomato fruit: characterization of novel ethylene-responsive and ripening-related genes isolated by differential display. Plant J 18: 589-600
    • (1999) Plant J , vol.18 , pp. 589-600
    • Zegzouti, H.1    Jones, B.2    Frasse, P.3    Marty, C.4    Maitre, B.5    Latche, A.6    Pech, J.-C.7    Bouzayen, M.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.