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Volumn 142, Issue 1-2, 2007, Pages 41-49

Detection of Banana mild mosaic virus and Banana virus X by polyvalent degenerate oligonucleotide RT-PCR (PDO-RT-PCR)

Author keywords

Banana mild mosaic virus; Banana virus X; BanMMV; BVX; Detection; Flexiviridae; Polyvalent degenerate oligonucleotide

Indexed keywords

INOSINE; NUCLEIC ACID; PLANT EXTRACT; POLYCLONAL ANTISERUM; PRIMER DNA;

EID: 34247268566     PISSN: 01660934     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jviromet.2007.01.004     Document Type: Article
Times cited : (15)

References (27)
  • 2
    • 34247222024 scopus 로고    scopus 로고
    • Identification of uncharacterized filamenous viral particles on banana plants
    • Caruana M.-L., and Galzi S. Identification of uncharacterized filamenous viral particles on banana plants. Acta Hortic. 490 (1998) 323-335
    • (1998) Acta Hortic. , vol.490 , pp. 323-335
    • Caruana, M.-L.1    Galzi, S.2
  • 3
    • 0029842189 scopus 로고    scopus 로고
    • Characterization of a potexvirus infecting Hosta spp.
    • Currier S., and Lockhart B.E.L. Characterization of a potexvirus infecting Hosta spp. Plant Dis. 80 (1996) 1040-1043
    • (1996) Plant Dis. , vol.80 , pp. 1040-1043
    • Currier, S.1    Lockhart, B.E.L.2
  • 4
    • 0031984509 scopus 로고    scopus 로고
    • Effect of temperature on symptom expression and reliability of Banana streak badnavirus detection from naturally-infected plantain and banana (Musa spp.)
    • Dahal G., d'A. Hugues J., Thottapilly G., and Lockhart B.E.L. Effect of temperature on symptom expression and reliability of Banana streak badnavirus detection from naturally-infected plantain and banana (Musa spp.). Plant Dis. 82 (1998) 16-21
    • (1998) Plant Dis. , vol.82 , pp. 16-21
    • Dahal, G.1    d'A. Hugues, J.2    Thottapilly, G.3    Lockhart, B.E.L.4
  • 5
    • 0037210977 scopus 로고    scopus 로고
    • A spot nested RT-PCR method for the simultaneous detection of members of thr Vitivirus and Foveavirus genera in grapevine
    • Dovas C.I., and Katis N.I. A spot nested RT-PCR method for the simultaneous detection of members of thr Vitivirus and Foveavirus genera in grapevine. J. Virol. Methods 107 (1999) 99-106
    • (1999) J. Virol. Methods , vol.107 , pp. 99-106
    • Dovas, C.I.1    Katis, N.I.2
  • 6
    • 0037406086 scopus 로고    scopus 로고
    • A spot multiplex nested PCR for the simultaneous and generic detection of viruses involved in the aetiology of grapevine leafroll and rugose wood of grapevine
    • Dovas C.I., and Katis N.I. A spot multiplex nested PCR for the simultaneous and generic detection of viruses involved in the aetiology of grapevine leafroll and rugose wood of grapevine. J. Virol. Methods 109 (1999) 217-226
    • (1999) J. Virol. Methods , vol.109 , pp. 217-226
    • Dovas, C.I.1    Katis, N.I.2
  • 8
    • 20044364439 scopus 로고    scopus 로고
    • Polyvalent degenerate oligonucleotide reverse trancription-polymerase chain reaction: a polyvalent detection and characterization tool for trichoviruses, capilloviruses and foveaviruses
    • Foissac X., Svanella-Dumas L., Gentit P., Dulucq M.-J., Marais A., and Candresse T. Polyvalent degenerate oligonucleotide reverse trancription-polymerase chain reaction: a polyvalent detection and characterization tool for trichoviruses, capilloviruses and foveaviruses. Phytopathology 95 (2005) 617-625
    • (2005) Phytopathology , vol.95 , pp. 617-625
    • Foissac, X.1    Svanella-Dumas, L.2    Gentit, P.3    Dulucq, M.-J.4    Marais, A.5    Candresse, T.6
  • 9
    • 0034905635 scopus 로고    scopus 로고
    • Molecular characterization of Banana mild mosaic virus, a new filamentous virus in Musa spp.
    • Gambley C.F., and Thomas J.E. Molecular characterization of Banana mild mosaic virus, a new filamentous virus in Musa spp. Arch. Virol. 146 (2001) 1369-1379
    • (2001) Arch. Virol. , vol.146 , pp. 1369-1379
    • Gambley, C.F.1    Thomas, J.E.2
  • 10
    • 0000763669 scopus 로고
    • Restriction fragment length polymorphism (RFLP)-based phylogenetic analysis of Musa
    • Gawel N.J., Jarret R.L., and Whittemore A.P. Restriction fragment length polymorphism (RFLP)-based phylogenetic analysis of Musa. Theor. Appl. Genet. 84 (1992) 286-290
    • (1992) Theor. Appl. Genet. , vol.84 , pp. 286-290
    • Gawel, N.J.1    Jarret, R.L.2    Whittemore, A.P.3
  • 12
    • 0036910736 scopus 로고    scopus 로고
    • Detection of Banana streak virus in field samples of banana from Uganda
    • Harper G., Hart D., Moult S., and Hull R. Detection of Banana streak virus in field samples of banana from Uganda. Ann. Appl. Biol. 141 (2002) 247-257
    • (2002) Ann. Appl. Biol. , vol.141 , pp. 247-257
    • Harper, G.1    Hart, D.2    Moult, S.3    Hull, R.4
  • 13
    • 4544289032 scopus 로고    scopus 로고
    • Comparison of direct binding PCR with recombinant coat protein antibody based dot blot immunobinding assay and IC-RT-PCR for the detection of Sugarcane streak mosaic virus causing mosaic disease of sugarcane in India
    • Hema M., Savithri H.S., and Sreenivasulu P. Comparison of direct binding PCR with recombinant coat protein antibody based dot blot immunobinding assay and IC-RT-PCR for the detection of Sugarcane streak mosaic virus causing mosaic disease of sugarcane in India. Curr. Sci. 85 (2003) 1774-1777
    • (2003) Curr. Sci. , vol.85 , pp. 1774-1777
    • Hema, M.1    Savithri, H.S.2    Sreenivasulu, P.3
  • 15
    • 0025743809 scopus 로고
    • The phylogeny of RNA-dependant RNA polymerases of positive-strand RNA viruses
    • Koonin E. The phylogeny of RNA-dependant RNA polymerases of positive-strand RNA viruses. J. Gen. Virol. 72 (1991) 2197-2206
    • (1991) J. Gen. Virol. , vol.72 , pp. 2197-2206
    • Koonin, E.1
  • 16
    • 0036139211 scopus 로고    scopus 로고
    • MEGA2: molecular evolutionary genetics analysis software
    • Kumar S., Tamura K., Jakobsen I.B., and Nei M. MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17 (2001) 1244-1245
    • (2001) Bioinformatics , vol.17 , pp. 1244-1245
    • Kumar, S.1    Tamura, K.2    Jakobsen, I.B.3    Nei, M.4
  • 17
  • 18
    • 0004275709 scopus 로고
    • Columbia University Press, New York, USA pp. 190-191
    • Nei M. Molecular Evolutionary Genetics (1987), Columbia University Press, New York, USA pp. 190-191
    • (1987) Molecular Evolutionary Genetics
    • Nei, M.1
  • 19
    • 84879536734 scopus 로고    scopus 로고
    • Development of a serological assay detecting serologically diverse Banana streak virus isolates
    • Proceedings of the First International Conference on Banana and Plantain for Africa. Craenen K., Ortiz R., Karamura E.B., and Vuylsteke D. (Eds)
    • Ndowora T., and Lockhart B.E.L. Development of a serological assay detecting serologically diverse Banana streak virus isolates. In: Craenen K., Ortiz R., Karamura E.B., and Vuylsteke D. (Eds). Proceedings of the First International Conference on Banana and Plantain for Africa. Acta Hortic. 540 (2000) 377-388
    • (2000) Acta Hortic. , vol.540 , pp. 377-388
    • Ndowora, T.1    Lockhart, B.E.L.2
  • 20
    • 0029920071 scopus 로고    scopus 로고
    • Print-capture PCR: a simple and highly sensitive method for the detection of Plum pox virus (PPV) in plant tissues
    • Olmos A., Dasi M.-A., Candresse T., and Cambra M. Print-capture PCR: a simple and highly sensitive method for the detection of Plum pox virus (PPV) in plant tissues. Nucleic Acids Res. 24 (1996) 2192-2193
    • (1996) Nucleic Acids Res. , vol.24 , pp. 2192-2193
    • Olmos, A.1    Dasi, M.-A.2    Candresse, T.3    Cambra, M.4
  • 21
    • 0029158747 scopus 로고
    • Development of a detection system for viruses of woody plants based on PCR analysis of immobilized virions
    • Rowhani J., Maningas M.A., Lile L.S., Daubert S.D., and Golino D.A. Development of a detection system for viruses of woody plants based on PCR analysis of immobilized virions. Phytopathology 85 (1995) 347-352
    • (1995) Phytopathology , vol.85 , pp. 347-352
    • Rowhani, J.1    Maningas, M.A.2    Lile, L.S.3    Daubert, S.D.4    Golino, D.A.5
  • 22
    • 0032443889 scopus 로고    scopus 로고
    • Use of degenerate primers in a RT-PCR assay for the identification and análisis of some filamentous virases, with special reference to Clostero- and Vitiviruses of the grapevine
    • Saldarelli P., Rowhani A., Routh G., Minafra A., and Digiaro M. Use of degenerate primers in a RT-PCR assay for the identification and análisis of some filamentous virases, with special reference to Clostero- and Vitiviruses of the grapevine. EJPP 104 (1998) 945-950
    • (1998) EJPP , vol.104 , pp. 945-950
    • Saldarelli, P.1    Rowhani, A.2    Routh, G.3    Minafra, A.4    Digiaro, M.5
  • 23
    • 0033833726 scopus 로고    scopus 로고
    • Development of a multiplex immunocapture PCR with colourimetric detection for viruses of banana
    • Sharman M., Thomas J.E., and Dietzgen R.G. Development of a multiplex immunocapture PCR with colourimetric detection for viruses of banana. J. Virol. Methods 89 (2000) 75-88
    • (2000) J. Virol. Methods , vol.89 , pp. 75-88
    • Sharman, M.1    Thomas, J.E.2    Dietzgen, R.G.3
  • 24
    • 23844480700 scopus 로고    scopus 로고
    • Molecular characterization of banana virus X (BVX), a novel member of the Flexiviridae
    • Teycheney P.-Y., Marais A., Svanella-Dumas L., and Candresse T. Molecular characterization of banana virus X (BVX), a novel member of the Flexiviridae. Arch. Virol. 150 (2005) 1715-1727
    • (2005) Arch. Virol. , vol.150 , pp. 1715-1727
    • Teycheney, P.-Y.1    Marais, A.2    Svanella-Dumas, L.3    Candresse, T.4
  • 25
    • 27644484673 scopus 로고    scopus 로고
    • High genetic variability and evidence for plant-to-plant transfer of Banana Mild Mosaic Virus
    • Teycheney P.-Y., Laboureau N., Iskra-Caruana M.-L., and Candresse T. High genetic variability and evidence for plant-to-plant transfer of Banana Mild Mosaic Virus. J. Gen. Virol. 86 (2005) 3179-3187
    • (2005) J. Gen. Virol. , vol.86 , pp. 3179-3187
    • Teycheney, P.-Y.1    Laboureau, N.2    Iskra-Caruana, M.-L.3    Candresse, T.4
  • 26
    • 0031806316 scopus 로고    scopus 로고
    • Studies on a Nigerian isolate of Banana streak badnavirus: I. Purification and enzyme-linked immunosorbent assay
    • Thottapilly G., Dahal G., and Lockhart B.E. Studies on a Nigerian isolate of Banana streak badnavirus: I. Purification and enzyme-linked immunosorbent assay. Ann. Appl. Biol. 132 (1998) 253-261
    • (1998) Ann. Appl. Biol. , vol.132 , pp. 253-261
    • Thottapilly, G.1    Dahal, G.2    Lockhart, B.E.3
  • 27
    • 0031574072 scopus 로고    scopus 로고
    • The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., and Higgins D.G. The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 24 (1997) 4876-4882
    • (1997) Nucleic Acids Res. , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.