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Volumn 6, Issue 2, 2007, Pages 189-195

ANT: A novel heuristic algorithm for finding motif

Author keywords

DNA sequence; Gene; Motif

Indexed keywords

COMPUTATIONAL EFFICIENCY; COMPUTER SIMULATION; DNA SEQUENCES; GENES; MOLECULAR BIOLOGY;

EID: 34247227514     PISSN: 18125638     EISSN: 18125646     Source Type: Journal    
DOI: 10.3923/itj.2007.189.195     Document Type: Article
Times cited : (2)

References (13)
  • 1
    • 0002759539 scopus 로고
    • Unsupervised learning of multiple motifs in biopolymers using expectation maximization
    • Bailey, T.L. and C. Elkan, 1995. Unsupervised learning of multiple motifs in biopolymers using expectation maximization. Machine Learn., 21: 51-80.
    • (1995) Machine Learn , vol.21 , pp. 51-80
    • Bailey, T.L.1    Elkan, C.2
  • 3
    • 0032413411 scopus 로고    scopus 로고
    • Predicting Gene Regulatory Element In-silico on Genomic Scale
    • Brazma, A., I. Jonassen, J. Vilo and E. Ukkonen, 1998. Predicting Gene Regulatory Element In-silico on Genomic Scale. Genome Res., 15: 1202-1215.
    • (1998) Genome Res , vol.15 , pp. 1202-1215
    • Brazma, A.1    Jonassen, I.2    Vilo, J.3    Ukkonen, E.4
  • 4
    • 0036110853 scopus 로고    scopus 로고
    • Finding Motif Using Random Projection
    • Buhler, J. And M. Tompa, 2002. Finding Motif Using Random Projection. J. Comput. Biol., 9/2: 225-242.
    • (2002) J. Comput. Biol , vol.9 2 , pp. 225-242
    • Buhler, J.1    Tompa, A.M.2
  • 5
    • 0022358896 scopus 로고
    • Rigorous Pattern-recognition Methods for Dna Sequences: Analysis of Promoter Sequences from Escherichia Coli
    • Galas, D.J. M. Eggert and M. Watermann, 1985. Rigorous Pattern-recognition Methods for Dna Sequences: Analysis of Promoter Sequences from Escherichia Coli. J. Mol. Biol., 186/1: 117-128.
    • (1985) J. Mol. Biol , vol.186 1 , pp. 117-128
    • Galas, D.J.M.E.1    Watermann, M.2
  • 6
    • 0032826179 scopus 로고    scopus 로고
    • Identifying DNA and protein patterns with statistically significant alignments of multiple sequences
    • Herts, G.Z. and G.D. Storno, 1999. Identifying DNA and protein patterns with statistically significant alignments of multiple sequences. Bioinformatics, 15: 563-577.
    • (1999) Bioinformatics , vol.15 , pp. 563-577
    • Herts, G.Z.1    Storno, G.D.2
  • 7
    • 0025320805 scopus 로고
    • An Expectation Maximization (EM) algorithm for the identification and characterization of common sites in unaligned biopolymer sequences. Protein
    • Lawrence, C.E. and A.A. Reilly, 1990. An Expectation Maximization (EM) algorithm for the identification and characterization of common sites in unaligned biopolymer sequences. Protein: Struct. Func. Gene. 7: 41-51.
    • (1990) Struct. Func. Gene , vol.7 , pp. 41-51
    • Lawrence, C.E.1    Reilly, A.A.2
  • 8
    • 0027912333 scopus 로고
    • Detecting subtle sequence signals: A Gibbs sampling strategy for multiple alignments
    • Lawrence, C.E., S.F. Altschul, M.S. Boguski, J.S. Liu, A.F. Newald and J.C. Wootton, 1993. Detecting subtle sequence signals: A Gibbs sampling strategy for multiple alignments. Science, 262: 208-214.
    • (1993) Science , vol.262 , pp. 208-214
    • Lawrence, C.E.1    Altschul, S.F.2    Boguski, M.S.3    Liu, J.S.4    Newald, A.F.5    Wootton, J.C.6
  • 9
    • 0028270992 scopus 로고
    • Detecting Patterns in Protein Sequences
    • Neuwald, A.F. and P. Green, 1994. Detecting Patterns in Protein Sequences. J. Mol. Biol., 239/5: 698-712.
    • (1994) J. Mol. Biol , vol.239 5 , pp. 698-712
    • Neuwald, A.F.1    Green, P.2
  • 12
    • 0033289316 scopus 로고    scopus 로고
    • An exact method for finding short motifs in sequences, with application to the ribosome binding sites
    • Heidelberg, Germany, pp
    • Tompa, M., 1999. An exact method for finding short motifs in sequences, with application to the ribosome binding sites. Seventh International Conference on Intelligent Systems for Molecular Biology, Heidelberg, Germany, pp: 262-271.
    • (1999) Seventh International Conference on Intelligent Systems for Molecular Biology , pp. 262-271
    • Tompa, M.1
  • 13
    • 0033655171 scopus 로고    scopus 로고
    • ANN-SPEC: A method for discovering transcription factor binding sites with improved specificity
    • Workman, C. and G. Stormo, 2000. ANN-SPEC: A method for discovering transcription factor binding sites with improved specificity. In: Pacific Symposium of Biocomputing, 6: 464-476.
    • (2000) Pacific Symposium of Biocomputing , vol.6 , pp. 464-476
    • Workman, C.1    Stormo, G.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.