In Situ Bioremediation

Advances in Applied Microbiology

Volumn 61, Issue , 2007, Pages 285-305

  Jørgensen, Kirsten S ^a  

^a FINNISH ENVIRONMENT INSTITUTE   (Finland)

Author keywords

[No Author keywords available]

Indexed keywords

BIOREMEDIATION; NONHUMAN; PHYTOREMEDIATION; REVIEW; SOIL POLLUTION; SOIL TREATMENT; WATER CONTAMINATION; WATER TREATMENT;

BIODEGRADATION, ENVIRONMENTAL; SOIL MICROBIOLOGY; SOIL POLLUTANTS; WATER MICROBIOLOGY; WATER POLLUTANTS;

EID: 34247139729     PISSN: 00652164     EISSN: None     Source Type: Book Series    
DOI: 10.1016/S0065-2164(06)61008-3     Document Type: Review

References (67)

1. Aichberger H., Hasinger M., Braun R., and Loibner A.P. Potential of preliminary test methods to predict biodegradation performance of petroleum hydrocarbons in soil. Biodegradation 16 (2005) 115-1225
2. Anderson R.T., and Lovley D.R. Anaerobic bioremediation of benzene under sulfate-reducing conditions in a petroleum-contaminated aquifer. Environ. Sci. Technol. 34 (2000) 2261-2266
3. Anderson R.T., and Lovley D.R. Hexadecane decay by methanogenesis. Nature 404 (2000) 722-723
4. Atekwana E.A., Atekwana E., Legall F.D., and Krishnamurthy R.V. Biodegradation and mineral weathering controls on bulk electrical conductivity in a shallow hydrocarbon contaminated aquifer. J. Contam. Hydrol. 80 (2005) 149-167
5. Aziz C.E., Farhat S.K., Higgins E.A., Newell C.J., and Hansen J. A hydrogen recirculation system for the treatment of TCE-impacted groundwater. In: Magar V.S., and Kelley M.E. (Eds). "In Situ and On-Site Bioremediation-2003" (2003), Battelle Press, Columbus, OH 6 Paper B-04
6. Bekins B.A., Godsey E.M., and Warren E. Distribution of microbial physiologic types in an aquifer contaminated by crude oil. Microb. Ecol. 37 (1999) 263-275
7. Bekins B.A., Hostettler F.D., Herkelrath N., Delin G.N., Warren E., and Essaid H.I. Progression of methanogenic degradation of crude oil in the subsurface. Environ. Geosci. 12 (2005) 139-152
8. Beller H.R., Kane S.R., Legler T.C., and Alvarez P.J.J. A real-time polymerase chain reaction method for monitoring anaerobic, hydrocarbon-degrading bacteria based on a catabolic gene. Environ. Sci. Technol. 36 (2002) 3977-3984
9. Bolliger C., Schönholtzer F., Schroth M.H., Hahn D., Bernasconi S.M., and Zeyer J. Characterizing intrinsic bioremediation in a petroleum hydrocarbon-contaminated aquifer by combined chemical, isotopic, and biological analysis. Bioremediation J. 4 (2000) 359-371
10. Bragg J.R., Prince R.C., Harner E.J., and Atlas R.M. Effectiveness of bioremediation for the Exxon Valdez oil spill. Nature 368 (1994) 413-418
11. Chakraborty R., and Coates J.D. Anaerobic degradation of monoaromatic hydrocarbons. Appl. Microbiol. Biotechnol. 64 (2004) 437-446
12. Corey C., and Stewart K. Petroleum hydrocarbon remediation using air injection/vapor extraction, USMC mountain warfare training center. In: Magar V.S., and Kelley M.E. (Eds). "In Situ and On-Site Bioremediation-2003" (2003), Battelle Press, Columbus, OH 8 Paper E-06
13. Delille D., Delille B., and Pelletier E. Effectiveness of bioremediation of crude oil contaminated subarctic intertidal sediment: The microbial response. Microb. Ecol. 44 (2002) 118-126
14. Dojka M.A., Hugenholtz P., Haack S.K., and Pace N.R. Microbial diversity in a hydrocarbon- and chlorinated-solvent contaminated aquifer undergoing intrinsic bioremediation. Appl. Environ. Microbiol. 64 (1998) 3869-3877
15. Dybas M.J., Barcelona M., Bezborrodnikov S., Davies S., Forney L., Heuer H., Kawka O., Mayotte T., Sepulveda-Torres L., Smalla K., Sneathen M., Tiedje J., et al. Pilot-scale evaluation of bioaugmentation for in situ remediation of a carbon tetrachloride-contaminated aquifer. Environ. Sci. Technol. 32 (1998) 3598-3611
16. Dyer M., van Heiningen E., and Gerritse J. A field trial for in-situ bioremediation of 1,2-DCA. Engin. Geol. 70 (2003) 315-320
17. Ellis D.E., Lutz E.J., Odom J.M., Buchanan Jr. R.J., and Bartlett C.L. Bioaugmentation for accelerated in situ anaerobic bioremediation. Environ. Sci. Technol. 34 (2000) 2254-2260
18. EPA. Use of monitored natural attenuation at superfund, RCRA corrective action, and underground storage tank sites. Office of solid waste and emergency response (1999) 4-17 Washington, DC, 9200
19. ESTCP. Bioaugmentation for bioremediation of chlorinated solvents: Technology developments, status and research needs. Department of Defense (2005). http://www.clu-in.org/download/remed/Bioaug2005.pdf
20. Gieg L.M., and Suflita J.M. Detection of anaerobic metabolites of saturated and aromatic hydrocarbons in petroleum-contaminated aquifers. Environ. Sci. Technol. 36 (2002) 3755-3762
21. Gogoi B.K., Dutta N.N., Goswami T.R., and Mohan K. A case study of bioremediation of petroleum hydrocarbon contaminated soil at a crude oil spill. Adv. Environ. Res. 7 (2003) 767-782
22. Grossman E.L. Stable carbon isotopes as indicators of microbial activity in aquifers. In: Hurst C.J. (Ed). "Manual of Environmental Microbiology" (1997), American Society for Microbiology, Washington, DC 565-576
23. Hageman K.J., Field J.A., Istok J.D., and Semprini L. Quantifying the effects of fumarate on in situ reductive dechlorination rates. J. Contam. Hydrol. 75 (2004) 281-296
24. Hosoda A., Kasai Y., Hamamura N., Takahata Y., and Watanabe K. Development of a PCR method for the detection and quantification a benzoyl-CoA reductase gene and its application to monitored natural attenuation. Biodegradation 16 (2005) 591-601
25. Huesemann M.H., and Truex M.J. The role of oxygen diffusion in passive bioremediation of petroleum contaminated soils. J. Harzard. Mat. 51 (1996) 93-113
26. Hunkeler D., Höhener P., Bernasconi S., and Zeyer J. Engineered in situ bioremediation of a petroleum hydrocarbon-contaminated aquifer: Assessment of mineralization based on alkalinity, inorganic carbon and stable carbon isotope balances. J. Contam. Hydrol. 37 (1999) 201-223
27. Jørgensen K., Järvinen O., Sainio P., Salminen J., and Suortti A.-M. Quantification of contamination. In: Margesin R., and Schinner F. (Eds). "Manual for Soil Analysis - Monitoring and Assessing Soil Bioremediation". Soil Biology Vol. 5 (2005), Springer Verlag, Berlin Heidelberg 97-119
28. Jørgensen K., Björklöf K., Reinikainen J., Huotari T., Hänninen P., Huhta P., Leveinen J., Jarva J., Vanhala H., Salminen J., Schultz E., Sorvari J., et al. Demonstration of monitored natural attenuation (MNA) as a remediation technology - DEMO-MNA. In: Uhlmann O., Annokkée G.J., and Arendt F. (Eds). "Proceedings of the 9th International FZK/TNO Conference on Soil Water Systems ConSoil 2005" (2005), FZK, Karlsruhe, Germany 2100-2108
29. Kasai Y., Takahata Y., Hoaki T., and Watanabe K. Physiological and molecular characterization of a microbial community established in unsaturated, petroleum-contaminated soil. Environ. Microbiol. 7 (2005) 806-818
30. Katsivela E., Moore E.R.-B., Maroukli D., Strömpl C., Pieper D., and Kalogerakis N. Bacterial community dynamics during in situ bioremediation of petroleum waste sludge in landfarming sites. Biodegradation 16 (2005) 169-180
31. Kleikemper J., Pombo S.A., Schroth M.H., Sigler W.V., Pesaro M., and Zeyer J. Activity and diversity of methanogens in a petroleum hydrocarbon-contaminated aquifer. Appl. Environ. Microbiol. 71 (2005) 149-158
32. Knapp R.B., and Faison B.D. A bioengineering system for in situ bioremediation of contaminated groundwater. J. Ind. Microbiol. Biotechnol. 18 (1997) 189-197
33. Leeson A., and Hinchee R.E. "Soil Bioventing: Principles and Practice." (1997), CRC Lewis Publishers, Boca Raton
34. Major D.W., McMaster M.L., Cox E.E., Edwards E.A., Dworatzek S.M., Hendrickson E.R., Starr M.G., Payne J.A., and Buonamici L.W. Field demonstration of successful bioaugmentation to achieve dechlorination of tetrachloroethene to ethene. Environ. Sci. Technol. 36 (2002) 5106-5116
35. Maurer M., and Rittmann B.E. Modeling intrinsic bioremediation for interpret observable biogeochemical footprints of BTEX biodegradation: The need for fermentation and abiotic chemical processes. Biodegradation 15 (2004) 405-417
36. Margesin R., and Schinner F. Bioremediation (natural attenuation and biostimulation) of diesel-oil-contaminated soil in an Alpine glacier skiing area. Appl. Environ. Microbiol. 67 (2001) 3127-3133
37. Mishra S., Jyot J., Kuhad R., and Lal B. Evaluation of inoculum addition to stimulate in situ bioremediation of oily-sludge-contaminated soil. Appl. Environ. Microbiol. 67 (2001) 1675-1681
38. Moslemy P., Neufeld R.J., and Guiot S.R. Biodegradation of gasoline by gellan gum-encapsulated bacterial cells. Biotechnol. Bioeng. 80 (2002) 175-184
39. Mulligan C.N., and Yong R.N. Natural attenuation of contaminated soils. Environ. Int. 30 (2004) 587-601
40. Rhee S.-K., Liu X., Wu L., Chong S.C., Wan X., and Zhou J. Detection of genes involved in biodegradation and biotransformation in microbial communities by using 50-mer oligonucleotide microarrays. Appl. Environ. Microbiol. 70 (2004) 4303-4317
41. Rike A.G., Haugen K.B., Børresen M., Engene B., and Kolstad P. In situ biodegradation of petroleum hydrocarbons in frozen arctic soils. Cold Reg. Sci. Technol. 37 (2003) 97-120
42. Romer J.R., Swain K., Sorenson K.S., Martin J.P., Alvarez-Cohen L., Hoda B., and Kellner D.L. Large-scale lactate injection in a mildly-reducing aquifer for PCE/TCE dechlorination. In: Magar V.S., and Kelley M.E. (Eds). "In Situ and On-Site Bioremediation-2003" (2003), Battelle Press, Columbus, OH 8 Paper B-09
43. Rügner H., Finkel M., Kaschl A., and Bittens M. Application of monitored natural attenuation in contaminated land management-a review and recommended approach for Europe. Environ. Sci. Pol. 9 (2006) 568-576
44. Salanitro J.P., Johnson P.C., Spinnler G.E., Naner P.M., Wisniewski H.L., and Bruce C. Field-scale demonstration of enhanced MTBE bioremediation through aquifer bioaugmentation and oxygenation. Environ. Sci. Technol. 34 (2000) 4152-4162
45. Salminen J. Natural attenuation of anthropogenic organic compounds in boreal soil and groundwater. TUT publications 552 (2005), Tampere University of Technology, Tampere PhD thesis
46. Salminen J.M., Tuomi P.M., Suortti A.-M., and Jørgensen K.S. Potential for aerobic and anaerobic biodegradation of petroleum hydrocarbons in boreal subsurface. Biodegradation 15 (2004) 29-39
47. Salminen J.M., Hänninen P.K., Leveinen J., Lintinen P.T.J., and Jørgensen K.S. Occurrence and rates of terminal electron-accepting processes and recharge processes in petroleum hydrocarbon-contaminated subsurface. J. Environ. Qual. 35 (2006) 2273-2282
48. Sanseverino J., Werner C., Fleming J., Applegate B., King J.M.H., and Sayler G.S. Molecular diagnostics of polycyclic aromatic hydrocarbon biodegradation in manufactured gas plant soils. Biodegradation 4 (1993) 303-321
49. Scow K.M., and Hicks K.A. Natural attenuation and enhanced bioremediation of organic contaminants in groundwater. Curr. Opin. Biotechnol. 16 (2005) 246-253
50. Shields A.R.G., Jones A., and Butler A. Monitoring of organic and inorganic parameters for a full-scale in situ pulsed air-sparging programme. In: Magar V.S., and Kelley M.E. (Eds). "In Situ and On-Site Bioremediation-2003" (2003), Battelle Press, Columbus, OH 6 Paper E-07
51. Siddique T., Fedorak P.M., and Foght J.M. Biodegradation of short-chain n-alkanes in oil sands tailings under methanogenic conditions. Environ. Sci. Technol. 40 (2006) 5459-5464
52. Sleep B.E., Seeprsad D.J., Mo K., Heidorn C.M., Hrapovic L., Morrill P.L., McMaster M.L., Hood E.D., Lebron C., Lollar B.S., Major D.W., and Edwards E.A. Biological enhancement of tetrachloroethene dissolution and associated microbial community changes. Environ. Sci. Technol. 40 (2006) 3623-3633
53. Smith A.E., Hristova K., Wood I., Mackay D.M., Lory E., Lorenza D., and Scow K.M. Comparison of biostimulation versus bioaugmentation with bacterial strain PM1 for treatment of groundwater contaminated with methyl tertiary butyl ether (MTBE). Environ. Health Perspect. 113 (2005) 317-322
54. Stapleton R.D., and Sayler G.S. Assessment of the microbiological potential for the natural attenuation of petroleum hydrocarbons in a shallow aquifer system. Microb. Ecol. 36 (1998) 349-361
55. Stapleton R.D., Sayler G.S., Boggs J.M., Libelo E.L., Stauffer T., and Macintyre W.G. Changes in subsurface catabolic gene frequency during natural attenuation of petroleum hydrocarbons. Environ. Sci. Technol. 34 (2000) 1991-1999
56. Steffan R.J., Sperry K.L., Walsh M.T., Vainberg S., and Condee C.W. Field-scale evaluation of in situ bioaugmentation for remediation of chlorinated solvents in groundwater. Environ. Sci. Technol. 33 (1999) 2771-2781
57. Stocking A.J., Deeb R.A., Flores A.E., Stringfellow W., Talley J., Brownell R., and Kavanaugh M.C. Bioremediation of MTBE: A review from a practical perspective. Biodegradation 11 (2000) 187-201
58. Thompson I.P., van der Gast C.J., Ciric L., and Singer A.C. Bioaugmentation for bioremediation: The challenge of strain selection. Environ. Microbiol. 7 (2005) 909-915
59. Townsend G.T., Prince R.C., and Sulflita J.M. Anaerobic oxidation of crude oil hydrocarbons by the resident microorganisms of a contaminated anoxic aquifer. Environ. Sci. Technol. 37 (2003) 5213-5218
60. 14C-naphthalene mineralization potential in petroleum hydrocarbon-contaminated oxic soil layers. FEMS Microbiol. Ecol. 51 (2004) 99-107
61. Watson J.S., Jones D.M., Swannell R.P.J., and van Duin A.C.T. Formation of carboxylic acids during aerobic biodegradation of crude oil and evidence of microbial oxidation of hopanes. Org. Geochem. 33 (2002) 1153-1169
62. Widdel F., and Rabus F. Anaerobic biodegradation of saturated and aromatic hydrocarbons. Curr. Opin. Biotechnol. 12 (2001) 259-276
63. Wilson J.T. Aerobic in situ bioremediation. In: Moyer E.E., and Kosteki P.T. (Eds). "MTBE Remediation Handbook" (2003), Amherst Scientific Publishers, Amherst, Massachusetts 243-264
64. Wilson R.D., Mackay D.M., and Scow K.M. In situ MTBE biodegradation supported by diffusive oxygen release. Environ. Sci. Technol. 36 (2002) 190-199
65. von Wintzingerode F., Selent B., Hegemann W., and Göbel U.B. Phylogenetic analysis of an anaerobic trichlorobenzene-transforming microbial consortium. Appl. Environ. Microbiol. 65 (1999) 283-286
66. Zengler K., Richnow H.H., Rosselló-Mora R., Michaelis W., and Widdel F. Methane formation from long-chain alkanes by anaerobic microorganisms. Nature 401 (1999) 266-269
67. Zimmerman C.T., Hinchee R., Wilk T., Hoeppel R., Costanza J., and Larson S. Passive bioventing-A technology evaluation under varying geographical and lithologic conditions. In: Magar V.S., and Kelley M.E. (Eds). "In Situ and On-Site Bioremediation-2003" (2003), Battelle Press, Columbus, OH 8 Paper E-08