SSR diversity of vegetable soybean [Glycine max (L.) Merr.]

Genetic Resources and Crop Evolution

Volumn 54, Issue 3, 2007, Pages 497-508

  Mimura, Makiko ^a,d   Coyne, Clarice J ^a,b   Bambuck, Marie W ^a   Lumpkin, Thomas A ^a,c  

^a WASHINGTON STATE UNIVERSITY   (United States)

^b U S DEPARTMENT OF AGRICULTURE   (United States)

^c AVRDC THE WORLD VEGETABLE CENTER   (Taiwan)

^d UNIVERSITY OF BRITISH COLUMBIA   (Canada)

Author keywords

DNA fingerprinting; Edamame; Genetic diversity; Glycine max; Maodou; SSR; Vegetable soybean

Indexed keywords

CLUSTER ANALYSIS; CROP IMPROVEMENT; CULTIVAR; GENETIC ANALYSIS; GENETIC RESOURCE; GENETIC VARIATION; SOYBEAN;

ASIA; CHINA; EURASIA; FAR EAST; JAPAN; NORTH AMERICA; UNITED STATES;

GLYCINE MAX;

EID: 34147164413     PISSN: 09259864     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10722-006-0006-4     Document Type: Article

References (32)

1. Abe J., Xu D.H., Suzuki Y., Kanazawa A. and Shimamoto Y. 2003. Soybean germplasm pools in Asia revealed by nuclear SSRs. Theor. Appl. Genet. 106: 445-453.
2. Akkaya M.S., Bhagwat A.A. and Cregan P.B. 1992. Length polymorphism of simple sequences repeats DNA in soybean. Genetics 132: 1131-1139.
3. Akkaya M.S., Shoemaker R.C., Specht J.E., Bhagwat A.A. and Cregan P.B. 1995. Integration of simple sequence repeat DNA markers into a soybean linkage map. Crop Sci. 35: 1439-1445.
4. Bassam B.J., Caetano-Anolles G. and Gresshoff P.M. 1991. Fast and sensitive silver staining of DNA in polyacrylamide gels. Anal. Biochem. 196: 80-83.
5. Brown-Guedira G.L., Thompson J.A., Nelson R.L. and Warburton M.L. 2000. Evaluation of genetic diversity of soybean introductions and North American ancestors using RAPD and SSR makers. Crop Sci. 40: 815-823.
6. Camacho-Chacón F., Chinzio S.R. and Beaver J.S. 1999. Evaluación agronómica y parámetros genéticos en soya para consumo humano directo en Puerto Rico (In Spanish, with English abstract.). J. Agric. Univ. Puerto Rico 83: 153-167.
7. Cregan P.B., Jarvik T., Bush A.L., Shoemaker R.C., Lark K.G., Kahler A.L., Kaya N., Van Toai T.T., Lohnes D.G., Chung J. and Specht J.E. 1999. An integrated genetic linkage map of the soybean genome. Crop Sci. 39: 1464-1490.
8. Cregan P.B. and Quigley C.V. 1997. Simple sequence repeat DNA markers. In: Caetano-anoll G. and Gresshoff P.M. (eds), DNA Markers: Protocols, Application, and Overviews. Wiley-Liss, Inc. New York.
9. Cui Z., Carter T.E. and Burton J.W. 2000. Genetic diversity patterns in Chinese soybean cultivars based on coefficient of parentage. Crop Sci. 40: 1780-1793.
10. Diwan N. and Cregan P.B. 1997. Automated sizing of fluorescent-labeled simple sequence repeat (SSR) markers to assay genetic variation in soybean. Theor. Appl. Genet. 95: 723-733.
11. Fehr W.R. and Caviness C.E. 1977. Stages of Soybean Development. Spec. Rep. 80. Iowa Agric. Home Econ. Exp. Stn., Iowa State Univ., Ames.
12. Gizlice Z., Carter T.E., Gerig T.M. and Burton J.W. 1994. Genetic base for North American public soybean cultivars released between 1947 and 1988. Crop Sci. 34: 1143-1151.
13. Jaccard P. 1908. Nouvelles recherches sur la distribution florale. Bull. Soc. Vaudoise Sci. Nat. 44: 223-270.
14. Kohno Y. 1988. Nougyou-Gijyutu-Taikei: Vegetable 10: no.13: Edamame (In Japanese). Nousangyouson Bunka Kyokai, Tokyo.
15. Konovsky J., Lumpkin T.A. and McClary D. 1994. Edamame: the vegetable soybean. In: O'Rourke A.D. (ed.), Understanding the Japanese Food and Agrimarket: A Multifaceted Opportunity. Haworth Press, Binghamton New York, pp. 173-181.
16. Kraemer M.E., Mebrahtu T. and Rangappa M. 1994. Evaluation of vegetable soybean genotypes for resistance to Mexican bean beetle (Coleoptera: Coccinellidae). Econ. Ento. 87: 252-257.
17. MAFF (Ministry of Agriculture, Forestry and Fisheries, Japan). 2000. Summary of the Survey on the Wholesale Market of Vegetables and Fruit, 1999. Preliminary Statistics Reports No.12-116.
18. Murray M.G. and Thompson W.F. 1980. Rapid isolation of high molecular weight DNA. Nucleic Acids Res. 8: 4321-4325.
19. Narvel J.M., Fehr W.R., Chu W., Grant D. and Shoemaker R.C. 2000. Simple sequence repeat diversity among soybean plant introductions and elite genotypes. Crop Sci. 40: 1452-1458.
20. Nguyen Q.V. 1997. Production of Vegetable Soybean for the domestic market and trial shipment to Japan. RIRDC research Paper Series no. 97/8. Rural Industries Research and Development Corporation, Australia.
21. Powell W., Morgante M., Andre C., Hanafey M. and Vogel J. 1996. The comparison of RFLP, RAPD, AFLP and SSR (microsatellite) markers for germplasm analysis. Mol. Breed. 2: 225-238.
22. Rohlf F.J. 2000. NTSYSpc: Numerical Taxonomy and Multivariate Analysis System, version 2.1. Exeter Software, NY.
23. Rongwen J, Akkaya M.S., Lavi U. and Cregan P.B. 1995. The use of microsatellite DNA markers for soybean genotype identification. Theor. Appl. Genet. 91: 1001-1007.
24. SAS Institute Inc. 2000. SAS OnlineDoc, Version 8. SAS Institute Inc., Cary, NC.
25. Shimizu S. (ed.), 1977. Yasai-Engei-Daijiten (In Japanese). Youkendo, Tokyo.
26. Shurtleff W. and Lumpkin T.A. 2001. Chronology of green vegetable soybeans and vegetable-type soybeans. In: Lumpkin T.A. and Shamugasundaram S. (eds), Second International Vegetable Soybean Conference. Washington State University.
27. Sneath P.H.A. and Sokal R.R. 1973. Numerical Taxonomy. W.H. Freeman and Company, San Francisco.
28. Takahashi N. 1991. Vegetable soybean varietal improvement in Japan - past, present and future. In: Shamugasundaram S. (ed.), Vegetable Soybean: Research Needs for Production and Quality Improvement. Asian Vegetable Research and Development Center, Taiwan, pp. 26-29.
29. Wasee S., Srinives P. and Shanmugasundaran S. 1992. Primary leaf size as a selection criterion for vegetable soybean. Acta Horticult. 292: 135-142.
30. Yokomizo G.K. and Vello N.A. 1998. Use of pod width as visual score in substitution of one hundred seed weight on vegetable soybean. Soybean Genet. Newslett. 25: 21-22.
31. Zhou X., Carter T.E.Jr., Cui Z., Miyazaki S. and Burton J.W. 2000. Genetic base of Japanese soybean cultivars released during 1950 to 1988. Crop Sci. 40: 1794-1802.
32. Zhou X., Carter Jr. T.E., Cui Z., Miyazaki S. and Burton J.W. 2002. Genetic diversity patterns in Japanese soybean cultivars based on coefficient of parentage. Crop Sci. 42: 1331-1342.