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Volumn 17, Issue 3, 2007, Pages 496-510

A discrete mathematical model applied to genetic regulation and metabolic networks

Author keywords

Discrete model; Genetic regulation; Metabolic networks

Indexed keywords

ACETATE KINASE; ACETIC ACID; ACETYL COENZYME A; CITRATE SYNTHASE; ENOLASE; FRUCTOSE 6 PHOSPHATE; FRUCTOSE BISPHOSPHATE; FRUCTOSE BISPHOSPHATE ALDOLASE; FUMARATE HYDRATASE; FUMARIC ACID; GENE PRODUCT; GLUCOSE; GLUCOSE 6 PHOSPHATE; GLUCOSE 6 PHOSPHATE ISOMERASE; GLYCERALDEHYDE 3 PHOSPHATE DEHYDROGENASE; GLYCEROL; GLYCEROL KINASE; GLYCEROPHOSPHATE; ISOCITRATE DEHYDROGENASE; ISOCITRATE LYASE; ISOCITRIC ACID; MALATE DEHYDROGENASE; MALATE SYNTHASE; PHOSPHATE ACETYLTRANSFERASE; PHOSPHOENOLPYRUVATE CARBOXYKINASE (GTP); PHOSPHOENOLPYRUVATE CARBOXYLASE; PYRUVATE KINASE; SUCCINATE DEHYDROGENASE; TRIOSEPHOSPHATE ISOMERASE;

EID: 34147161267     PISSN: 10177825     EISSN: 17388872     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (9)

References (21)
  • 1
    • 32144443469 scopus 로고    scopus 로고
    • Regulatory network for cell shape changes during Drosophila ventral furrow formation
    • Aracena, J., M. González, A. Zúñiga, M. Méndez, and V. Cambiazo. 2006. Regulatory network for cell shape changes during Drosophila ventral furrow formation. J. Theor. Biol. 239: 49-62.
    • (2006) J. Theor. Biol. , vol.239 , pp. 49-62
    • Aracena, J.1    González, M.2    Zúñiga, A.3    Méndez, M.4    Cambiazo, V.5
  • 2
    • 77954807650 scopus 로고    scopus 로고
    • Application to genetic regulation networks, Doctoral Thesis in Engineering Sciences, mention Mathematical Modelling, University of Chile
    • Aracena, J. 2001. Discrete Mathematical Models Associated to Biological Systems. Application to genetic regulation networks, Doctoral Thesis in Engineering Sciences, mention Mathematical Modelling, University of Chile.
    • (2001) Discrete Mathematical Models Associated to Biological Systems
    • Aracena, J.1
  • 3
    • 0030029512 scopus 로고    scopus 로고
    • Frur mediates catabolite activation of pyruvate kinase (pykF) gene expression in Escherichia coli
    • Bledig, S. A., T. M. Ramseier, and M. H. Saier Jr. 1996. Frur mediates catabolite activation of pyruvate kinase (pykF) gene expression in Escherichia coli. J. Bacteriol. 178: 280-283.
    • (1996) J. Bacteriol. , vol.178 , pp. 280-283
    • Bledig, S.A.1    Ramseier, T.M.2    Saier Jr., M.H.3
  • 4
    • 0032217157 scopus 로고    scopus 로고
    • The EIIGlc protein is involved in glucose-mediated activation of Escherichia coli gapA and gapB-pgk transcription
    • Charpentier, B., V. Bardey, N. Robas, and C. Branlant. 1998. The EIIGlc protein is involved in glucose-mediated activation of Escherichia coli gapA and gapB-pgk transcription. J. Bacteriol. 180: 6476-6483.
    • (1998) J. Bacteriol. , vol.180 , pp. 6476-6483
    • Charpentier, B.1    Bardey, V.2    Robas, N.3    Branlant, C.4
  • 5
    • 0031782955 scopus 로고    scopus 로고
    • Regulation of acetate metabolism by protein phosphorylation in enteric bacteria
    • Cozzone, A. J. 1998. Regulation of acetate metabolism by protein phosphorylation in enteric bacteria. Annu. Rev. Microbiol. 52: 127-164.
    • (1998) Annu. Rev. Microbiol. , vol.52 , pp. 127-164
    • Cozzone, A.J.1
  • 6
    • 0037008673 scopus 로고    scopus 로고
    • Transcriptional regulation in constraints-based models of Escherichia coli
    • Covert, M. W. and B. O. Palsson. 2002. Transcriptional regulation in constraints-based models of Escherichia coli. J. Biol. Chem. 277: 28058-28064.
    • (2002) J. Biol. Chem. , vol.277 , pp. 28058-28064
    • Covert, M.W.1    Palsson, B.O.2
  • 7
    • 0031438608 scopus 로고    scopus 로고
    • Transcriptional regulation of the aconitase genes (acnA and acnB) of Escherichia coli
    • Cunningham, L., M. J. Gruer, and J. R. Guest. 1997. Transcriptional regulation of the aconitase genes (acnA and acnB) of Escherichia coli. Microbiology 143: 3795-3805.
    • (1997) Microbiology , vol.143 , pp. 3795-3805
    • Cunningham, L.1    Gruer, M.J.2    Guest, J.R.3
  • 8
    • 0036091651 scopus 로고    scopus 로고
    • Glycerol-3-phosphate-induced catabolite repression in Escherichia coli
    • Eppler, T., P. Postma, A. Schütz, U. Völker, and W. Boos. 2002. Glycerol-3-phosphate-induced catabolite repression in Escherichia coli. J. Bacteriol. 184: 3044-3052.
    • (2002) J. Bacteriol. , vol.184 , pp. 3044-3052
    • Eppler, T.1    Postma, P.2    Schütz, A.3    Völker, U.4    Boos, W.5
  • 9
    • 0037457492 scopus 로고    scopus 로고
    • Metabolic analysis of the synthesis of high levels of intracellular human SOD in S. cerevisiae rhSOD 2060 411 SGA122
    • Gonzalez, R., B. A. Andrews, J. Monitor, and J. A. Asenjo. 2003. Metabolic analysis of the synthesis of high levels of intracellular human SOD in S. cerevisiae rhSOD 2060 411 SGA122. Biotechnol. Bioeng. 82: 152-169.
    • (2003) Biotechnol. Bioeng. , vol.82 , pp. 152-169
    • Gonzalez, R.1    Andrews, B.A.2    Monitor, J.3    Asenjo, J.A.4
  • 10
    • 0030463296 scopus 로고    scopus 로고
    • Flux analysis and control of the central metabolic pathways in Eseherichia coli
    • Holms, H. 1996. Flux analysis and control of the central metabolic pathways in Eseherichia coli. FEMS Microbiol. Rev. 19: 85-116.
    • (1996) FEMS Microbiol. Rev. , vol.19 , pp. 85-116
    • Holms, H.1
  • 13
    • 15044349959 scopus 로고    scopus 로고
    • Construction of comprehensive metabolic network for glycolysis with regulation mechanism and effectors
    • Jin, J. H., U. S. Jung, J. W. Nam, Y. H. In, S. Y. Lee, D. Lee, and J. Lee. 2005. Construction of comprehensive metabolic network for glycolysis with regulation mechanism and effectors. J. Microbiol. Biotechnol. 15: 161-174.
    • (2005) J. Microbiol. Biotechnol. , vol.15 , pp. 161-174
    • Jin, J.H.1    Jung, U.S.2    Nam, J.W.3    In, Y.H.4    Lee, S.Y.5    Lee, D.6    Lee, J.7
  • 14
    • 0029762915 scopus 로고    scopus 로고
    • Definition of a consensus DNA-binding site for the Escherichia coli pleiotropic regulatory protein, FruR
    • Negre, D., C, Bonod-Bidaud, C. Geourjon, G. Deleage, A. J. Cozzone, and J. C. Cortay. 1996. Definition of a consensus DNA-binding site for the Escherichia coli pleiotropic regulatory protein, FruR. Molec. Microbiol. 21: 257-266.
    • (1996) Molec. Microbiol. , vol.21 , pp. 257-266
    • Negre, D.1    Bonod-Bidaud, C.2    Geourjon, C.3    Deleage, G.4    Cozzone, A.J.5    Cortay, J.C.6
  • 16
    • 0034008457 scopus 로고    scopus 로고
    • Gene expression profiling by DNA microarrays and metabolic fluxes in Escherichia coli
    • Oh, M. and J. C. Liao. 2000. Gene expression profiling by DNA microarrays and metabolic fluxes in Escherichia coli. Biotechnol. Prog. 16: 278-286.
    • (2000) Biotechnol. Prog. , vol.16 , pp. 278-286
    • Oh, M.1    Liao, J.C.2
  • 17
    • 0028815572 scopus 로고
    • Regulation of malate dehydrogenase (mdh) gene expression in Escherichia coli in response to oxygen, carbon, and heme availability
    • Park, S. J., P. A. Cotter, R. P. Gunsalus. 1995. Regulation of malate dehydrogenase (mdh) gene expression in Escherichia coli in response to oxygen, carbon, and heme availability. J. Bacteriol. 177: 6652-6656.
    • (1995) J. Bacteriol. , vol.177 , pp. 6652-6656
    • Park, S.J.1    Cotter, P.A.2    Gunsalus, R.P.3
  • 18
    • 0028856397 scopus 로고
    • Oxygen, iron, carbon, and superoxide control of the fumarase fumA and fumC genes of Escherichia coli: Role of the arcA, fnr, and soxR gene products
    • Park, S. J. and R. P. Gunsalus. 1995. Oxygen, iron, carbon, and superoxide control of the fumarase fumA and fumC genes of Escherichia coli: Role of the arcA, fnr, and soxR gene products. J. Bacteriol. 177: 6255-6262.
    • (1995) J. Bacteriol. , vol.177 , pp. 6255-6262
    • Park, S.J.1    Gunsalus, R.P.2
  • 19
    • 0029941168 scopus 로고    scopus 로고
    • The catabolite repressor/activator (Cra) protein of enteric bacteria
    • Saier, M. H. Jr. and T. M. Ramseier. 1996. The catabolite repressor/ activator (Cra) protein of enteric bacteria. J. Bacteriol. 178: 3411-3417.
    • (1996) J. Bacteriol. , vol.178 , pp. 3411-3417
    • Saier Jr., M.H.1    Ramseier, T.M.2
  • 20
    • 0032876035 scopus 로고    scopus 로고
    • Repression of the gene encoding succinate dehydrogenase in response to glucose is mediated by the EIICB(Glc) protein in Escherichia coli
    • Takeda, S., A. Matsushika, and T. Mizuno. 1999. Repression of the gene encoding succinate dehydrogenase in response to glucose is mediated by the EIICB(Glc) protein in Escherichia coli. J. Biochem. 126: 354-360.
    • (1999) J. Biochem. , vol.126 , pp. 354-360
    • Takeda, S.1    Matsushika, A.2    Mizuno, T.3
  • 21
    • 0034675924 scopus 로고    scopus 로고
    • A novel regulatory role of glucose transporter of Escherichia coli: Membrane sequestration of a global repressor Mlc
    • Tanaka, Y., K. Kimata, and H. Aiba. 2000. A novel regulatory role of glucose transporter of Escherichia coli: Membrane sequestration of a global repressor Mlc. EMBO J. 19: 5344-5352.
    • (2000) EMBO J. , vol.19 , pp. 5344-5352
    • Tanaka, Y.1    Kimata, K.2    Aiba, H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.