Intracellular transport by single-headed kinesin KIF1A: Effects of single-motor mechanochemistry and steric interactions

Physical Review E - Statistical, Nonlinear, and Soft Matter Physics

Volumn 75, Issue 4, 2007, Pages

  Greulich, Philip ^a   Garai, Ashok ^b   Nishinari, Katsuhiro ^c   Schadschneider, Andreas ^a,d   Chowdhury, Debashish ^b,e  

^a UNIVERSITY OF COLOGNE   (Germany)

^b INDIAN INSTITUTE OF TECHNOLOGY KANPUR   (India)

^c UNIVERSITY OF TOKYO   (Japan)

^d UNIVERSITY OF BONN   (Germany)

^e MAX PLANCK INSTITUT FÜR PHYSIK KOMPLEXER SYSTEME   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINETRIPHOSPHATE; CONFORMATIONS; ENZYMES; MATHEMATICAL MODELS; MOLECULAR DYNAMICS;

INTRACELLULAR MOLECULAR MOTOR TRAFFIC; KINESIN; MICROTUBULE TRACK; MOTOR PROTEINS;

CELLS;

EID: 34147102211     PISSN: 15393755     EISSN: 15502376     Source Type: Journal    
DOI: 10.1103/PhysRevE.75.041905     Document Type: Article

References (42)

1. Molecular Motors, edited by, M. Schliwa, (Wiley-VCH, New York, 2003).
2. IEE Proc. Nanobiotechnology, 150, No. 3 (2003), special issue, edited by, J. E. Molloy, and, C. Veigel,.
3. J. Phys.: Condens. Matter JCOMEL 0953-8984 17, No. 47 (2005), special issue.
4. D. Chowdhury, A. Schadschneider, and K. Nishinari, Phys. Life Rev. 2, 318 (2005).
5. J. Howard, Mechanics of Motor Proteins and the Cytoskeleton (Sinauer Associates, Sunderland, MA, 2001).
6. C. Bustamante, D. Keller, and G. Oster, Acc. Chem. Res. ACHRE4 0001-4842 10.1021/ar0001719 34, 412 (2001).
7. M. Aridor and L. A. Hannan, Traffic (Oxford, U. K.) TRAFFA 1398-9219 1, 836 (2000);
8. M. Aridor and L. A. Hannan, Traffic (Oxford, U. K.) TRAFFA 1398-9219 3, 781 (2002).
9. C. MacDonald, J. Gibbs, and A. Pipkin, Biopolymers BIPMAA 0006-3525 10.1002/bip.1968.360060102 6, 1 (1968).
10. B. Schmittmann and R. K. P. Zia, in Phase Transition and Critical Phenomena, edited by, C. Domb, and, J. L. Lebowitz, (Academic Press, New York, 1995), Vol. 17.
11. B. Derrida, Phys. Rep. PRPLCM 0370-1573 10.1016/S0370-1573(98)00006-4 301, 65 (1998).
12. G. M. Schütz, Phase Transitions and Critical Phenomena (Academic Press, New York, 2001), Vol. 19.
13. R. Lipowsky, S. Klumpp, and T. M. Nieuwenhuizen, Phys. Rev. Lett. PRLTAO 0031-9007 10.1103/PhysRevLett.87.108101 87, 108101 (2001).
14. A. Parmeggiani, T. Franosch, and E. Frey, Phys. Rev. Lett. PRLTAO 0031-9007 10.1103/PhysRevLett.90.086601 90, 086601 (2003).
15. M. R. Evans, R. Juhasz, and L. Santen, Phys. Rev. E PLEEE8 1063-651X 10.1103/PhysRevE.68.026117 68, 026117 (2003).
16. V. Popkov, A. Rakos, R. D. Willmann, A. B. Kolomeisky, and G. M. Schütz, Phys. Rev. E PLEEE8 1063-651X 10.1103/PhysRevE.67.066117 67, 066117 (2003).
17. A. Parmeggiani, T. Franosch, and E. Frey, Phys. Rev. E PLEEE8 1063-651X 10.1103/PhysRevE.70.046101 70, 046101 (2004).
18. R. Lipowsky, Y. Chai, S. Klumpp, S. Liepelt, and M. J. I. Müller, Physica A PHYADX 0378-4371 10.1016/j.physa.2006.05.019 372, 34 (2006), and references therein.
19. K. Nishinari, Y. Okada, A. Schadschneider, and D. Chowdhury, Phys. Rev. Lett. PRLTAO 0031-9007 10.1103/PhysRevLett.95.118101 95, 118101 (2005).
20. Y. Okada and N. Hirokawa, Science SCIEAS 0036-8075 10.1126/science.283. 5405.1152 283, 1152 (1999).
21. Y. Okada and N. Hirokawa, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 10.1073/pnas.97.2.640 97, 640 (2000).
22. M. Kikkawa, E. P. Sablin, Y. Okada, H. Yajima, R. J. Fletterick, and N. Hirokawa, Nature (London) NATUAS 0028-0836 10.1038/35078000 411, 439 (2001).
23. Y. Okada, H. Higuchi, and N. Hirokawa, Nature (London) NATUAS 0028-0836 10.1038/nature01804 424, 574 (2003).
24. R. Nitta, M. Kikkawa, Y. Okada, and N. Hirokawa, Science SCIEAS 0036-8075 10.1126/science.1096621 305, 678 (2004).
25. K. Sasaki, J. Phys. Soc. Jpn. JUPSAU 0031-9015 10.1143/JPSJ.72.2497 72, 2497 (2003).
26. F. Jülicher, A. Ajdari, and J. Prost, Rev. Mod. Phys. RMPHAT 0034-6861 10.1103/RevModPhys.69.1269 69, 1269 (1997).
27. P. Reimann, Phys. Rep. PRPLCM 0370-1573 10.1016/S0370-1573(01)00081-3 361, 57 (2002).
28. Y. Okada (private communication).
29. Yi-der Chen, Biophys. J. BIOJAU 0006-3495 78, 313 (2000).
30. M. E. Fisher and A. B. Kolomeisky, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 10.1073/pnas.96.12.6597 96, 6597 (1999);
31. M. E. Fisher and A. B. Kolomeisky, Physica A PHYADX 0378-4371 10.1016/S0378-4371(99)00389-1 274, 241 (1999).
32. A. B. Kolomeisky and M. E. Fisher, Physica A PHYADX 0378-4371 10.1016/S0378-4371(99)00586-5 279, 1 (2000).
33. A. B. Kolomeisky, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.1405446 115, 7253 (2001).
34. A. B. Kolomeisky, G. Schütz, E. B. Kolomeisky, and J. P. Straley, J. Phys. A JPHAC5 0305-4470 10.1088/0305-4470/31/33/003 31, 6911 (1998);
35. V. Popkov and G. M. Schütz, Europhys. Lett. EULEEJ 0295-5075 10.1209/epl/i1999-00474-0 48, 257 (1999).
36. Philip Greulich, Diploma thesis, Cologne University, 2006.
37. S. A. Janowsky and J. L. Lebowitz, Phys. Rev. A PLRAAN 1050-2947 10.1103/PhysRevA.45.618 45, 618 (1992).
38. S. Chatterjee and M. Barma, e-print cond-mat/0611675, J. Stat. Mech.: Theory Exp. ZZZZZZ 1742-5468 (to be published).
39. L. S. Goldstein, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 10.1073/pnas.111145298 98, 6999 (2001).
40. L. S. Goldstein, Neuron NERNET 0896-6273 40, 415 (2003).
41. E. Mandelkow and E. M. Mandelkow, Trends Cell Biol. TCBIEK 0962-8924 12, 585 (2002).
42. A. Garai (unpublished).