ProgeniDB: A novel cell lineage database for generation associated phenotypic behavior in cell-based assays

Cell Cycle

Volumn 6, Issue 7, 2007, Pages 868-874

  Khan, Imtiaz A ^a   Husemann, Peter ^c   Campbell, Lee ^b   White, Nick S ^d   White, Richard J ^a   Smith, Paul J ^b   Errington, Rachel J ^a  

^a CARDIFF UNIVERSITY   (United Kingdom)

^b CARDIFF UNIVERSITY SCHOOL OF MEDICINE   (United Kingdom)

^c BIELEFELD UNIVERSITY   (Germany)

^d UNIVERSITY OF OXFORD   (United Kingdom)

Author keywords

Anticancer drug; Bioinformatics; Cell lineage; Database; Timelapse microscopy

Indexed keywords

ANTINEOPLASTIC AGENT;

ARTICLE; CATALOGING DATABASE; CELL LINEAGE; COMPUTER PROGRAM; DRUG RESPONSE; INTERNET; MODEL; PHENOTYPE; QUALITATIVE ANALYSIS; QUANTITATIVE ANALYSIS;

EID: 34147099665     PISSN: 15384101     EISSN: 15514005     Source Type: Journal    
DOI: 10.4161/cc.6.7.4045     Document Type: Article

References (12)

1. Marquez N, Chappell SC, Sansom OJ, Clarke AR, Teesdale-Spittle P, Errington RJ, Smith PJ. Microtubule stress modifies intra-nuclear location of Msh2 in mouse embryonic fibroblasts. Cell Cycle 2004; 3(5):662-671.
2. Prieur-Carrillo G, Chu K, Lindqvist J, Dewey WC. Computerized video time-lapse (CVTL) analysis of the fate of giant cells produced by X-irradiating EJ30 human bladder carcinoma cells. Radiat Res 2003; 159(6):705-12.
3. Neumann B, Held M, Liebel U, Erfle H, Rogers P, Pepperkok R, Ellenberg J. High-throughput RNAi screening by time-lapse imaging of live human cells. Nat Methods 2006; 3(5):385-390.
4. Chu K, Teele N, Dewey MW, Albright N, Dewey WC. Computerized video time lapse study of cell cycle delay and arrest, mitotic catastrophe, apoptosis and clonogenic survival in irradiated 14-3-3s and CDKN1A (p21) knockout cell lines. Radiat Res 2004; 162(3):270-86.
5. Braun V, Azevedo RB, Gumbel M, Agapow PM, Leroi AM, Meinzer HP. ALES: Cell lineage analysis and mapping of developmental events. Bioinformatics 2003; 19(7):851-858.
6. Swedlow JR, Goldberg I, Brauner E, Sorger PK. Informatics and quantitative analysis in biological imaging. Science 2003; 300(5616):100-2.
7. Khan IA, Hedley CJ, White NS, Ali R, Chappell MJ, Evans ND, Campbell L, Marquez N, Fisher J, Smith PJ, Errington RJ. A novel integrative bioinformatics environment for encoding and interrogating time-lapse microscopy images. Modelling and Control in Biomedical Systems. Amsterdam: ELSEVIER, 2006.
8. Pommier Y. Topoisomerase I inhibitors: Camptothecins and beyond. Nat Rev Cancer 2006; 6(10):789-802.
9. Thomas N, Goodyear ID. Stealth sensors: Real-time monitoring of the cell cycle. Targets 2003; 2:26-23.
10. 2 checkpoint. Oncogene 2003; 22(48):7642-7648.
11. Feeney GP, Errington RJ, Wiltshire M, Marquez N, Chappell SC, Smith PJ. Tracking the cell cycle origins for escape from TPT action by breast cancer cells. Br J Can 2003; 88:1310-1317.
12. Errington RJ, Marquez N, Chappell SC, Wiltshire M, Smith PJ. Time-lapse microscopy approaches to track cell cycle progression at the single-cell. Current Protocols in Cytometry. New Jersey: J Wiley, 2006.