LPA +93C>T and +121G>A polymorphisms detection by electronic microchip technology

Molecular Genetics and Metabolism

Volumn 91, Issue 1, 2007, Pages 79-84

  Sticchi, Elena ^a   Lenti, Meri ^b,c   Giusti, Betti ^b   Sestini, Ilaria ^b   Abbate, Rosanna ^b   Fatini, Cinzia ^b  

^a IRCCS FONDAZIONE DON CARLO GNOCCHI   (Italy)

^b UNIVERSITY OF FLORENCE   (Italy)

^c Fondazione Farmacogenomica FIORGEN ONLUS   (Italy)

Author keywords

Electronic microchip; Lipoprotein(a); Polymorphism

Indexed keywords

LIPOPROTEIN A;

ACCURACY; ARTICLE; CONTROLLED STUDY; COST BENEFIT ANALYSIS; ELECTRONICS; GENE LOCUS; GENETIC ANALYSIS; GENOTYPE PHENOTYPE CORRELATION; HUMAN; HUMAN EXPERIMENT; INTERMETHOD COMPARISON; MICROCHIP ANALYSIS; NORMAL HUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN LOCALIZATION; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; SINGLE NUCLEOTIDE POLYMORPHISM;

APOPROTEIN(A); BASE SEQUENCE; GENOTYPE; HUMANS; MOLECULAR SEQUENCE DATA; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PHENOTYPE; POLYMORPHISM, SINGLE NUCLEOTIDE; SEQUENCE ANALYSIS, DNA;

EID: 34047262046     PISSN: 10967192     EISSN: 10967206     Source Type: Journal    
DOI: 10.1016/j.ymgme.2006.12.011     Document Type: Article

References (24)

1. Hartmann M., von Birgelen C., Mintz G.S., Stoel M.G., Eggebrecht H., Wieneke H., Fahy M., Neumann T., van der Palen J., Louwerenburg H.W., Verhorst P.M., and Erbel R. Relation between lipoprotein(a) and fibrinogen and serial intravascular ultrasound plaque progression in left main coronary arteries. J. Am. Coll. Cardiol. 48 (2006) 446-452
2. Ohira T., Schreiner P.J., Morrisett J.D., Chambless L.E., Rosamond W.D., and Folsom A.R. Lipoprotein(a) and incident ischemic stroke: the Atherosclerosis Risk in Communities (ARIC) study. Stroke 37 (2006) 1407-1412
3. Suk Danik J., Rifai N., Buring J.E., and Ridker P.M. Lipoprotein(a), measured with an assay independent of apolipoprotein(a) isoform size, and risk of future cardiovascular events among initially healthy women. JAMA 296 (2006) 1363-1370
4. Ichinose A., and Kuriyama M. Detection of polymorphisms in the 5′-flanking region of the gene for apolipoprotein(a). Biochem. Biophys. Res. Commun. 209 (1995) 372-378
5. Suzuki K., Kuriyama M., Saito T., and Ichinose A. Plasma lipoprotein(a) levels and expression of the apolipoprotein(a) gene are dependent on the nucleotide polymorphisms in its 5′-flanking region. J. Clin. Invest. 99 (1997) 1361-1366
6. Berglund L., and Ramakrishnan R. Lipoprotein(a): an elusive cardiovascular risk factor. Arterioscler. Thromb. Vasc. Biol. 24 (2004) 2219-2226
7. Utermann G. The mysteries of lipoprotein(a). Science 246 (1989) 904-910
8. Scanu A.M., and Fless G.M. Lipoprotein (a). Heterogeneity and biological relevance. J. Clin. Invest. 85 (1990) 1709-1715
9. Albers J.J., Marcovina S.M., and Lodge M.S. The unique lipoprotein(a): properties and immunochemical measurement. Clin. Chem. 36 (1990) 2019-2026
10. Albers J.J., Wahl P., and Hazzard W.R. Quantitative genetic studies of the human plasma Lp(a) lipoprotein. Biochem. Genet. 11 (1974) 475-486
11. McCormick S.P., Linton M.F., Hobbs H.H., Taylor S., Curtiss L.K., and Young S.G. Expression of human apolipoprotein B90 in transgenic mice. Demonstration that apolipoprotein B90 lacks the structural requirements to form lipoprotein. J. Biol. Chem. 269 (1994) 24284-24289
12. Kraft H.G., Kochl S., Menzel H.J., Sandholzer C., and Utermann G. The apolipoprotein (a) gene: a transcribed hypervariable locus controlling plasma lipoprotein (a) concentration. Hum. Genet. 90 (1992) 220-230
13. Gavish D., Azrolan N., and Breslow J.L. Plasma Ip(a) concentration is inversely correlated with the ratio of Kringle IV/Kringle V encoding domains in the apo(a) gene. J. Clin. Invest. 84 (1989) 2021-2027
14. Frank S.L., Klisak I., Sparkes R.S., Mohandas T., Tomlinson J.E., McLean J.W., Lawn R.M., and Lusis A.J. The apolipoprotein(a) gene resides on human chromosome 6q26-27, in close proximity to the homologous gene for plasminogen. Hum. Genet. 79 (1988) 352-356
15. Boerwinkle E., Menzel H.J., Kraft H.G., and Utermann G. Genetics of the quantitative Lp(a) lipoprotein trait. III. Contribution of Lp(a) glycoprotein phenotypes to normal lipid variation. Hum. Genet. 82 (1989) 73-78
16. Boerwinkle E., Leffert C.C., Lin J., Lackner C., Chiesa G., and Hobbs H.H. Apolipoprotein(a) gene accounts for greater than 90% of the variation in plasma lipoprotein(a) concentrations. J. Clin. Invest. 90 (1992) 52-60
17. Perombelon Y.F., Soutar A.K., and Knight B.L. Variation in lipoprotein(a) concentration associated with different apolipoprotein(a) alleles. J. Clin. Invest. 93 (1994) 1481-1492
18. Wade D.P., Clarke J.G., Lindahl G.E., Liu A.C., Zysow B.R., Meer K., Schwartz K., and Lawn R.M. 5′ control regions of the apolipoprotein(a) gene and members of the related plasminogen gene family. Proc. Natl. Acad. Sci. USA 90 (1993) 1369-1373
19. Zysow B.R., Lindahl G.E., Wade D.P., Knight B.L., and Lawn R.M. C/T polymorphism in the 5′ untranslated region of the apolipoprotein(a) gene introduces an upstream ATG and reduces in vitro translation. Arterioscler. Thromb. Vasc. Biol. 15 (1995) 58-64
20. Wu J.H., and Lee I.N. Studies of apolipoprotein (a) promoter from subjects with different plasma lipoprotein (a) concentrations. Clin. Biochem. 36 (2003) 241-246
21. Frusconi S., Giusti B., Rossi L., Bernabini S., Poggi F., Giotti I., Abbate R., Pepe G., and Torricelli F. Improvement of low density microelectronic array technology to characterize 14 mutations/single nucleotide polymorphisms from several human genes on a large scale. Clin. Chem. 50 (2004) 775-777
22. Sosnowski R.G., Tu E., Butler W.F., O'Connell J.P., and Heller M.J. Rapid determination of single base mismatch mutations in DNA hybrids by direct electric field control. Proc. Natl. Acad. Sci. USA 94 (1997) 1119-1123
23. Sofi F., Vecchio S., Giuliani G., Marcucci R., Gori A.M., Fedi S., Casini A., Surrenti C., Abbate R., and Gensini G.F. Dietary habits, lifestyle and cardiovascular risk factors in a clinically healthy Italian population: the "Florence" diet is not Mediterranean. Eur. J. Clin. Nutr. 59 (2005) 584-591
24. Cooper K.L., and Goering R.V. Development of a universal probe for electronic microarray and its application in characterization of the Staphylococcus aureus polC gene. J. Mol. Diagn. 5 (2003) 28-33