-
1
-
-
0000622269
-
In situ identification of micro-organism by whole cell hybridization with rRNA-targeted nucleic probes
-
Akkerman A.D.L., van Elsas D.J., and de Bruijin F.J. (Eds), Kluwer Academic Publishers, Dordrecht
-
Amann R.I. In situ identification of micro-organism by whole cell hybridization with rRNA-targeted nucleic probes. In: Akkerman A.D.L., van Elsas D.J., and de Bruijin F.J. (Eds). Molecular Microbial Ecology Manual (1995), Kluwer Academic Publishers, Dordrecht 1-15
-
(1995)
Molecular Microbial Ecology Manual
, pp. 1-15
-
-
Amann, R.I.1
-
2
-
-
0025294528
-
Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations
-
Amann R.I., Binder B.J., Olson R.J., Chisholm S.W., Devereux R., and Stahl D.A. Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations. Appl. Environ. Microbiol. 56 (1990) 1919-1925
-
(1990)
Appl. Environ. Microbiol.
, vol.56
, pp. 1919-1925
-
-
Amann, R.I.1
Binder, B.J.2
Olson, R.J.3
Chisholm, S.W.4
Devereux, R.5
Stahl, D.A.6
-
3
-
-
0025099312
-
Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology
-
Amann R.I., Krumholz L., and Stahl D.A. Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology. J. Bacteriol. 172 (1990) 762-770
-
(1990)
J. Bacteriol.
, vol.172
, pp. 762-770
-
-
Amann, R.I.1
Krumholz, L.2
Stahl, D.A.3
-
4
-
-
33144456004
-
mRNA-based parallel detection of active methanotroph populations by use of a diagnostic microarray
-
Bodrossy L., Stralis-Pavese N., Konrad-Köszler M., Weilharter A., Reichenauer T.G., Schöfer D., and Sessitsch A. mRNA-based parallel detection of active methanotroph populations by use of a diagnostic microarray. Appl. Environ. Microbiol. 72 (2006) 1672-1676
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 1672-1676
-
-
Bodrossy, L.1
Stralis-Pavese, N.2
Konrad-Köszler, M.3
Weilharter, A.4
Reichenauer, T.G.5
Schöfer, D.6
Sessitsch, A.7
-
5
-
-
33748805463
-
Application of a high-density oligonucleotide microarray approach to study bacterial population dynamics during uranium reduction and reoxidation
-
Brodie E.L., DeSantis T.Z., Joyner D.C., Baek S.M., Larsen J.T., Andersen G.L., Hazen T.C., Richardson P.M., Herman D.J., Tokunaga T.K., Wan J.M., and Firestone M.K. Application of a high-density oligonucleotide microarray approach to study bacterial population dynamics during uranium reduction and reoxidation. Appl. Environ. Microbiol. 72 (2006) 6288-6298
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 6288-6298
-
-
Brodie, E.L.1
DeSantis, T.Z.2
Joyner, D.C.3
Baek, S.M.4
Larsen, J.T.5
Andersen, G.L.6
Hazen, T.C.7
Richardson, P.M.8
Herman, D.J.9
Tokunaga, T.K.10
Wan, J.M.11
Firestone, M.K.12
-
6
-
-
0035512205
-
In situ characterization of Nitrospira-like nitrite oxidizing bacteria active in wastewater treatment plants
-
Daims H., Nielsen J.L., Nielsen P.H., Schleifer K.H., and Wagner M. In situ characterization of Nitrospira-like nitrite oxidizing bacteria active in wastewater treatment plants. Appl. Environ. Microbiol. 67 (2001) 5273-5284
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 5273-5284
-
-
Daims, H.1
Nielsen, J.L.2
Nielsen, P.H.3
Schleifer, K.H.4
Wagner, M.5
-
7
-
-
0035489394
-
Detection and enumeration of methanotrophs in acidic Sphagnum peat by 16S rRNA fluorescence in situ hybridization, including the use of newly developed oligonucleotide probes for Methylocella palustris
-
Dedysh S.N., Derakshani M., and Liesack W. Detection and enumeration of methanotrophs in acidic Sphagnum peat by 16S rRNA fluorescence in situ hybridization, including the use of newly developed oligonucleotide probes for Methylocella palustris. Appl. Environ. Microbiol. 67 (2001) 4850-4857
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 4850-4857
-
-
Dedysh, S.N.1
Derakshani, M.2
Liesack, W.3
-
8
-
-
0024507744
-
Phylogenetic stains: ribosomal RNA-based probes for the identification of single cells
-
DeLong E.F., Wickham G.S., and Pace N.R. Phylogenetic stains: ribosomal RNA-based probes for the identification of single cells. Science 243 (1989) 1360-1363
-
(1989)
Science
, vol.243
, pp. 1360-1363
-
-
DeLong, E.F.1
Wickham, G.S.2
Pace, N.R.3
-
9
-
-
0031789907
-
Flow cytometric analysis of the in situ accessibility of Escherichia coli 16S rRNA for fluorescently labeled oligonucleotide probes
-
Fuchs B.M., Wallner G., Beisker W., Schwippl I., Ludwig W., and Amann R. Flow cytometric analysis of the in situ accessibility of Escherichia coli 16S rRNA for fluorescently labeled oligonucleotide probes. Appl. Environ. Microbiol. 64 (1998) 4973-4982
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 4973-4982
-
-
Fuchs, B.M.1
Wallner, G.2
Beisker, W.3
Schwippl, I.4
Ludwig, W.5
Amann, R.6
-
10
-
-
0036255104
-
High-sensitivity hybridization assay for quantitation of residual E. coli DNA
-
Ji X., Lee K., and DiPaolo B. High-sensitivity hybridization assay for quantitation of residual E. coli DNA. BioTechniques 32 (2002) 1162-1167
-
(2002)
BioTechniques
, vol.32
, pp. 1162-1167
-
-
Ji, X.1
Lee, K.2
DiPaolo, B.3
-
11
-
-
0035989129
-
The microbial community composition of a nitrifying-denitrifying activated sludge from an industrial sewage treatment plant analyzed by the full-cycle rRNA approach
-
Juretschko S., Loy A., Lehner A., and Wagner M. The microbial community composition of a nitrifying-denitrifying activated sludge from an industrial sewage treatment plant analyzed by the full-cycle rRNA approach. Syst. Appl. Microbiol. 25 (2002) 84-99
-
(2002)
Syst. Appl. Microbiol.
, vol.25
, pp. 84-99
-
-
Juretschko, S.1
Loy, A.2
Lehner, A.3
Wagner, M.4
-
12
-
-
0242380174
-
Characterization of depth-related microbial community structure in lake sediment by denaturing gradient gel electrophoresis of amplified 16S rDNA and reversely transcribed 16S rRNA fragments
-
Koizumi Y., Kojima H., and Fukui M. Characterization of depth-related microbial community structure in lake sediment by denaturing gradient gel electrophoresis of amplified 16S rDNA and reversely transcribed 16S rRNA fragments. FEMS Microbiol. Ecol. 46 (2003) 147-157
-
(2003)
FEMS Microbiol. Ecol.
, vol.46
, pp. 147-157
-
-
Koizumi, Y.1
Kojima, H.2
Fukui, M.3
-
13
-
-
7444257667
-
Relationship of species-specific filament levels to filamentous bulking in activated sludge
-
Liao J., Lou I.C., and De los Reyes F.L. Relationship of species-specific filament levels to filamentous bulking in activated sludge. Appl. Environ. Microbiol. 70 (2004) 2420-2428
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, pp. 2420-2428
-
-
Liao, J.1
Lou, I.C.2
De los Reyes, F.L.3
-
14
-
-
0035344145
-
Development and validation of corynebacterium DNA microarrays
-
Loos A., Glanemann C., Willis L.B., O'Brien X.M., Lessard P.A., Gerstmeir R., Guillouet S., and Sinskey A.J. Development and validation of corynebacterium DNA microarrays. Appl. Environ. Microbiol. 67 (2001) 2310-2318
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 2310-2318
-
-
Loos, A.1
Glanemann, C.2
Willis, L.B.3
O'Brien, X.M.4
Lessard, P.A.5
Gerstmeir, R.6
Guillouet, S.7
Sinskey, A.J.8
-
15
-
-
0036795787
-
Oligonucleotide microarray for 16S rRNA gene-based detection of all recognized lineages of sulfate-reducing prokaryotes in the environment
-
Loy A., Lehner A., Lee N., Lee J., Adamczyk J., Meier H., Ernst J., Schleifer K.H., and Wagner M. Oligonucleotide microarray for 16S rRNA gene-based detection of all recognized lineages of sulfate-reducing prokaryotes in the environment. Appl. Environ. Microbiol. 68 (2002) 5064-5081
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 5064-5081
-
-
Loy, A.1
Lehner, A.2
Lee, N.3
Lee, J.4
Adamczyk, J.5
Meier, H.6
Ernst, J.7
Schleifer, K.H.8
Wagner, M.9
-
16
-
-
0030001221
-
Phylogenetic probes for analyzing abundance and spatial organization of nitrifying bacteria
-
Mobarry B.K., Wagner M., Urbain V., Rittmann B.E., and Stahl D.A. Phylogenetic probes for analyzing abundance and spatial organization of nitrifying bacteria. Appl. Environ. Microbiol. 62 (1996) 2156-2162
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 2156-2162
-
-
Mobarry, B.K.1
Wagner, M.2
Urbain, V.3
Rittmann, B.E.4
Stahl, D.A.5
-
17
-
-
0028165830
-
Group-specific 16S rRNA hybridization probes to describe natural communities of methanogens
-
Raskin L., Stromley J.M., Rittmann B.E., and Stahl D.A. Group-specific 16S rRNA hybridization probes to describe natural communities of methanogens. Appl. Environ. Microbiol. 60 (1994) 1232-1240
-
(1994)
Appl. Environ. Microbiol.
, vol.60
, pp. 1232-1240
-
-
Raskin, L.1
Stromley, J.M.2
Rittmann, B.E.3
Stahl, D.A.4
-
18
-
-
0030753340
-
Seasonal changes in the relative abundance of uncultivated sulfate-reducing bacteria in a salt marsh sediment and in the rhizosphere of Spartina alterniflora
-
Rooney-Varga, Devereux R., Evans R.S., and Hines M.E. Seasonal changes in the relative abundance of uncultivated sulfate-reducing bacteria in a salt marsh sediment and in the rhizosphere of Spartina alterniflora. Appl. Environ. Microbiol. 63 (1997) 3895-3901
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 3895-3901
-
-
Rooney-Varga1
Devereux, R.2
Evans, R.S.3
Hines, M.E.4
-
19
-
-
0024005650
-
Use of phylogenetically based hybridization probes for studies of ruminal microbial ecology
-
Stahl D.A., Flesher B., Mansfield H.R., and Montgomery L. Use of phylogenetically based hybridization probes for studies of ruminal microbial ecology. Appl. Environ. Microbiol. 54 (1988) 1079-1084
-
(1988)
Appl. Environ. Microbiol.
, vol.54
, pp. 1079-1084
-
-
Stahl, D.A.1
Flesher, B.2
Mansfield, H.R.3
Montgomery, L.4
-
20
-
-
0037316061
-
Oligonucleotide microarray for the study of functional gene diversity in the nitrogen cycle in the environment
-
Taroncher-Oldenburg G., Griner E.M., Francis C.A., and Ward B.B. Oligonucleotide microarray for the study of functional gene diversity in the nitrogen cycle in the environment. Appl. Environ. Microbiol. 69 (2003) 1159-1171
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 1159-1171
-
-
Taroncher-Oldenburg, G.1
Griner, E.M.2
Francis, C.A.3
Ward, B.B.4
-
21
-
-
0038220917
-
Optimization of single-base-pair mismatch discrimination in oligonucleotide microarrays
-
Urakawa H., Fantroussi S., Smidt H., Smoot J.C., Tribou E.H., Kelly J.J., Noble P.A., and Stahl D.A. Optimization of single-base-pair mismatch discrimination in oligonucleotide microarrays. Appl. Environ. Microbiol. 69 (2003) 2848-2856
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 2848-2856
-
-
Urakawa, H.1
Fantroussi, S.2
Smidt, H.3
Smoot, J.C.4
Tribou, E.H.5
Kelly, J.J.6
Noble, P.A.7
Stahl, D.A.8
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