Hardware accelerator for genomic sequence alignment

Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings

Volumn , Issue , 2006, Pages 5787-5789

  Chiang, Jason ^a,b,c   Studniberg, Michael ^d   Shaw, Jack ^b   Seto, Stephen ^b   Truong, Kevin ^a,b  

^a IEEE   (Canada)

^b UNIVERSITY OF TORONTO   (Canada)

^c UNIVERSITY OF TORONTO   (Canada)

^d NONE

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DATABASE SEARCHING; HARDWARE ACCELERATORS; HOMOLOGY; SMITH WATERMAN ALGORITHM;

ALGORITHMS; COMPUTATIONAL METHODS; COMPUTER AIDED ANALYSIS; DATABASE SYSTEMS; FUNCTION EVALUATION;

GENETIC ENGINEERING;

ALGORITHM; ARTICLE; AUTOMATED PATTERN RECOGNITION; BIOLOGY; COMPUTER; COMPUTER INTERFACE; COMPUTER LANGUAGE; COMPUTER PROGRAM; EQUIPMENT; GENOME; INFORMATION RETRIEVAL; METHODOLOGY; SEQUENCE ALIGNMENT; SIGNAL PROCESSING; STATISTICAL MODEL; TIME;

ALGORITHMS; COMPUTATIONAL BIOLOGY; COMPUTERS; GENOME; INFORMATION STORAGE AND RETRIEVAL; MODELS, STATISTICAL; PATTERN RECOGNITION, AUTOMATED; PROGRAMMING LANGUAGES; SEQUENCE ALIGNMENT; SIGNAL PROCESSING, COMPUTER-ASSISTED; SOFTWARE; TIME FACTORS; USER-COMPUTER INTERFACE;

EID: 34047132179     PISSN: 05891019     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/IEMBS.2006.260286     Document Type: Conference Paper

References (5)

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4. S. F. Altschul, W. Gish, W. Miller, E. W. Myers, and D. J. Lipman, "Basic local alignment search tool," J Mol Biol, vol. 215, pp. 403-10, 1990.
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