Gene identification using the stroke Z sign-curve representation

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

Volumn 2, Issue , 2006, Pages

  Rushdi, Ahmad ^a   Tuqan, Jamal ^a  

^a University of California Davis   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA STRAND; PROTEIN CODING; VOSS REPRESENTATION; Z SIGN-CURVE REPRESENTATION;

COMPUTATION THEORY; DIGITAL SIGNAL PROCESSING; DNA; MATHEMATICAL TECHNIQUES; PROTEINS;

GENES;

EID: 33947667789     PISSN: 15206149     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper

References (8)

1. D. Anastassiou, "Genomic signal processing," IEEE Signal Proc. Mag., vol. 18, no. 4, pp. 8-20, July 2001.
2. J. W. Fickett, "Recognition of protein coding regions in DNA sequences," Nucleic Acids Research, vol. 10, pp. 5303-5318, September 1982.
3. S. Tiwari, S. Ramachandran, A. Bhattacharya, S. Bhattacharya, and R. Ramaswamy, "Prediction of probable genes by Fourier analysis of genomic sequences," CABIOS, vol. 13, pp. 263-270, June 1997.
4. B. D. Silverman and R. Linsker, "A measure of DNA periodicity," Journal of Theoretical Biology, vol. 118, no. 3, pp. 295-300, February 1986.
5. R. Zhang and C.T. Zhang, "Z curves, an intuitive tool for visualizing and analyzing the DNA sequences," J. on Biom. Struc. Dyn., vol. 11, pp. 767-782, July 1994.
6. M. Yan, Z. S. Lin, and C. T. Zhang, "A new Fourier Transform approach for protein coding measure based on the format of the Z-curve," Bioinformatics, vol. 14, no. 8, July 1998.
7. R. F. Voss, "Evolution of long-range fractal correlations and 1/f noise in DNA base sequences," Phy. Rev. Lett., vol. 68, no. 25, pp. 3805-3808, June 1992.
8. P. P. Vaidyanathan, Multirate Systems and Filter Banks, Prentice Hall, 1993.