-
1
-
-
30844446303
-
Long-term transmission of defective RNA viruses in humans and Aedes mosquitoes
-
Aaskov J., Buzacott K., Thu H.M., Lowry K., and Holmes E.C. Long-term transmission of defective RNA viruses in humans and Aedes mosquitoes. Science 311 (2006) 236-238
-
(2006)
Science
, vol.311
, pp. 236-238
-
-
Aaskov, J.1
Buzacott, K.2
Thu, H.M.3
Lowry, K.4
Holmes, E.C.5
-
2
-
-
0036343422
-
Mouse neuroinvasive phenotype of West Nile virus strains varies depending upon virus genotype
-
Beasley D.W., Li L., Suderman M.T., and Barrett A.D. Mouse neuroinvasive phenotype of West Nile virus strains varies depending upon virus genotype. Virology 296 (2002) 17-23
-
(2002)
Virology
, vol.296
, pp. 17-23
-
-
Beasley, D.W.1
Li, L.2
Suderman, M.T.3
Barrett, A.D.4
-
3
-
-
0034872609
-
Occurrence of genetic drift and founder effect during quasispecies evolution of the VP2 and NS3/NS3A genes of bluetongue virus upon passage between sheep, cattle, and Culicoides sonorensis
-
Bonneau K.R., Mullens B.A., and MacLachlan N.J. Occurrence of genetic drift and founder effect during quasispecies evolution of the VP2 and NS3/NS3A genes of bluetongue virus upon passage between sheep, cattle, and Culicoides sonorensis. J. Virol. 75 (2001) 8298-8305
-
(2001)
J. Virol.
, vol.75
, pp. 8298-8305
-
-
Bonneau, K.R.1
Mullens, B.A.2
MacLachlan, N.J.3
-
4
-
-
27644589301
-
Phylogenetic analysis of North American West Nile virus isolates, 2001-2004: evidence for the emergence of a dominant genotype
-
Davis C.T., Ebel G.D., Lanciotti R.S., Brault A.C., Guzman H., Siirin M., Lambert A., Parsons R.E., Beasley D.W., Novak R.J., Elizondo-Quiroga D., Green E.N., Young D.S., Stark L.M., Drebot M.A., Artsob H., Tesh R.B., Kramer L.D., and Barrett A.D. Phylogenetic analysis of North American West Nile virus isolates, 2001-2004: evidence for the emergence of a dominant genotype. Virology 342 (2005) 252-265
-
(2005)
Virology
, vol.342
, pp. 252-265
-
-
Davis, C.T.1
Ebel, G.D.2
Lanciotti, R.S.3
Brault, A.C.4
Guzman, H.5
Siirin, M.6
Lambert, A.7
Parsons, R.E.8
Beasley, D.W.9
Novak, R.J.10
Elizondo-Quiroga, D.11
Green, E.N.12
Young, D.S.13
Stark, L.M.14
Drebot, M.A.15
Artsob, H.16
Tesh, R.B.17
Kramer, L.D.18
Barrett, A.D.19
-
5
-
-
0017806301
-
Nucleotide sequence heterogeneity of an RNA phage population
-
Domingo E., Sabo D., Taniguchi T., and Weissmann C. Nucleotide sequence heterogeneity of an RNA phage population. Cell 13 (1978) 735-744
-
(1978)
Cell
, vol.13
, pp. 735-744
-
-
Domingo, E.1
Sabo, D.2
Taniguchi, T.3
Weissmann, C.4
-
6
-
-
0026589151
-
Foot-and-mouth disease virus populations are quasispecies
-
Domingo E., Escarmis C., Martinez M.A., Martinez-Salas E., and Mateu M.G. Foot-and-mouth disease virus populations are quasispecies. Curr. Top. Microbiol. Immunol. 176 (1992) 33-47
-
(1992)
Curr. Top. Microbiol. Immunol.
, vol.176
, pp. 33-47
-
-
Domingo, E.1
Escarmis, C.2
Martinez, M.A.3
Martinez-Salas, E.4
Mateu, M.G.5
-
8
-
-
0036713840
-
Detection by enzyme-linked immunosorbent assay of antibodies to West Nile virus in birds
-
Ebel G.D., Dupuis A.P., Nicholas D., Young D., Maffei J., and Kramer L.D. Detection by enzyme-linked immunosorbent assay of antibodies to West Nile virus in birds. Emerging Infect. Dis. 8 (2002) 979-982
-
(2002)
Emerging Infect. Dis.
, vol.8
, pp. 979-982
-
-
Ebel, G.D.1
Dupuis, A.P.2
Nicholas, D.3
Young, D.4
Maffei, J.5
Kramer, L.D.6
-
9
-
-
7644225028
-
Genetic and phenotypic variation of West Nile virus in New York, 2000-2003
-
Ebel G.D., Carricaburu J., Young D., Bernard K.A., and Kramer L.D. Genetic and phenotypic variation of West Nile virus in New York, 2000-2003. Am. J. Trop. Med. Hyg. 71 (2004) 493-500
-
(2004)
Am. J. Trop. Med. Hyg.
, vol.71
, pp. 493-500
-
-
Ebel, G.D.1
Carricaburu, J.2
Young, D.3
Bernard, K.A.4
Kramer, L.D.5
-
10
-
-
0015101016
-
Molecular self-organization and the early stages of evolution
-
Eigen M. Molecular self-organization and the early stages of evolution. Q. Rev. Biophys. 4 (1971) 149-212
-
(1971)
Q. Rev. Biophys.
, vol.4
, pp. 149-212
-
-
Eigen, M.1
-
11
-
-
0017667182
-
The hypercycle. A principle of natural self-organization. Part A: Emergence of the hypercycle
-
Eigen M., and Schuster P. The hypercycle. A principle of natural self-organization. Part A: Emergence of the hypercycle. Naturwissenschaften 64 (1977) 541-565
-
(1977)
Naturwissenschaften
, vol.64
, pp. 541-565
-
-
Eigen, M.1
Schuster, P.2
-
12
-
-
0034634913
-
Early changes in quasispecies repertoire in HIV-infected infants: correlation with disease progression
-
Essajee S.M., Pollack H., Rochford G., Oransky I., Krasinski K., and Borkowsky W. Early changes in quasispecies repertoire in HIV-infected infants: correlation with disease progression. AIDS Res. Hum. Retroviruses 16 (2000) 1949-1957
-
(2000)
AIDS Res. Hum. Retroviruses
, vol.16
, pp. 1949-1957
-
-
Essajee, S.M.1
Pollack, H.2
Rochford, G.3
Oransky, I.4
Krasinski, K.5
Borkowsky, W.6
-
13
-
-
0033932002
-
Clinical significance of hepatitis C virus genotypes and quasispecies
-
Farci P., and Purcell R.H. Clinical significance of hepatitis C virus genotypes and quasispecies. Semin. Liver Dis. 20 (2000) 103-126
-
(2000)
Semin. Liver Dis.
, vol.20
, pp. 103-126
-
-
Farci, P.1
Purcell, R.H.2
-
14
-
-
0034646996
-
The outcome of acute hepatitis C predicted by the evolution of the viral quasispecies
-
Farci P., Shimoda A., Coiana A., Diaz G., Peddis G., Melpolder J.C., Strazzera A., Chien D.Y., Munoz S.J., Balestrieri A., Purcell R.H., and Alter H.J. The outcome of acute hepatitis C predicted by the evolution of the viral quasispecies. Science 288 (2000) 339-344
-
(2000)
Science
, vol.288
, pp. 339-344
-
-
Farci, P.1
Shimoda, A.2
Coiana, A.3
Diaz, G.4
Peddis, G.5
Melpolder, J.C.6
Strazzera, A.7
Chien, D.Y.8
Munoz, S.J.9
Balestrieri, A.10
Purcell, R.H.11
Alter, H.J.12
-
15
-
-
0037022678
-
Early changes in hepatitis C viral quasispecies during interferon therapy predict the therapeutic outcome
-
Farci P., Strazzera R., Alter H.J., Farci S., Degioannis D., Coiana A., Peddis G., Usai F., Serra G., Chessa L., Diaz G., Balestrieri A., and Purcell R.H. Early changes in hepatitis C viral quasispecies during interferon therapy predict the therapeutic outcome. Proc. Natl. Acad. Sci. U. S. A. 99 (2002) 3081-3086
-
(2002)
Proc. Natl. Acad. Sci. U. S. A.
, vol.99
, pp. 3081-3086
-
-
Farci, P.1
Strazzera, R.2
Alter, H.J.3
Farci, S.4
Degioannis, D.5
Coiana, A.6
Peddis, G.7
Usai, F.8
Serra, G.9
Chessa, L.10
Diaz, G.11
Balestrieri, A.12
Purcell, R.H.13
-
16
-
-
0024337928
-
HIV-1 isolates are rapidly evolving quasispecies: evidence for viral mixtures and preferred nucleotide substitutions
-
Goodenow M., Huet T., Saurin W., Kwok S., Sninsky J., and Wain-Hobson S. HIV-1 isolates are rapidly evolving quasispecies: evidence for viral mixtures and preferred nucleotide substitutions. J. Acquired Immune Defic. Syndr. 2 (1989) 344-352
-
(1989)
J. Acquired Immune Defic. Syndr.
, vol.2
, pp. 344-352
-
-
Goodenow, M.1
Huet, T.2
Saurin, W.3
Kwok, S.4
Sninsky, J.5
Wain-Hobson, S.6
-
17
-
-
27644543076
-
Effect of alternating passage on adaptation of sindbis virus to vertebrate and invertebrate cells
-
Greene I.P., Wang E., Deardorff E.R., Milleron R., Domingo E., and Weaver S.C. Effect of alternating passage on adaptation of sindbis virus to vertebrate and invertebrate cells. J. Virol. 79 (2005) 14253-14260
-
(2005)
J. Virol.
, vol.79
, pp. 14253-14260
-
-
Greene, I.P.1
Wang, E.2
Deardorff, E.R.3
Milleron, R.4
Domingo, E.5
Weaver, S.C.6
-
18
-
-
0020075533
-
Rapid evolution of RNA genomes
-
Holland J., Spindler K., Horodyski F., Grabau E., Nichol S., and VandePol S. Rapid evolution of RNA genomes. Science 215 (1982) 1577-1585
-
(1982)
Science
, vol.215
, pp. 1577-1585
-
-
Holland, J.1
Spindler, K.2
Horodyski, F.3
Grabau, E.4
Nichol, S.5
VandePol, S.6
-
19
-
-
23044469970
-
Genetic variation in West Nile virus from naturally infected mosquitoes and birds suggests quasispecies structure and strong purifying selection
-
Jerzak G., Bernard K.A., Kramer L.D., and Ebel G.D. Genetic variation in West Nile virus from naturally infected mosquitoes and birds suggests quasispecies structure and strong purifying selection. J. Gen.Virol. 86 (2005) 2175-2183
-
(2005)
J. Gen.Virol.
, vol.86
, pp. 2175-2183
-
-
Jerzak, G.1
Bernard, K.A.2
Kramer, L.D.3
Ebel, G.D.4
-
20
-
-
0025886357
-
Fitness alteration of foot-and-mouth disease virus mutants: measurement of adaptability of viral quasispecies
-
Martinez M.A., Carrillo C., Gonzalez-Candelas F., Moya A., Domingo E., and Sobrino F. Fitness alteration of foot-and-mouth disease virus mutants: measurement of adaptability of viral quasispecies. J. Virol. 65 (1991) 3954-3957
-
(1991)
J. Virol.
, vol.65
, pp. 3954-3957
-
-
Martinez, M.A.1
Carrillo, C.2
Gonzalez-Candelas, F.3
Moya, A.4
Domingo, E.5
Sobrino, F.6
-
21
-
-
0033515583
-
Lack of evolutionary stasis during alternating replication of an arbovirus in insect and mammalian cells
-
Novella I.S., Hershey C.L., Escarmis C., Domingo E., and Holland J.J. Lack of evolutionary stasis during alternating replication of an arbovirus in insect and mammalian cells. J. Mol. Biol. 287 (1999) 459-465
-
(1999)
J. Mol. Biol.
, vol.287
, pp. 459-465
-
-
Novella, I.S.1
Hershey, C.L.2
Escarmis, C.3
Domingo, E.4
Holland, J.J.5
-
22
-
-
0029861954
-
Quasispecies in wild-type tula hantavirus populations
-
Plyusnin A., Cheng Y., Lehvaslaiho H., and Vaheri A. Quasispecies in wild-type tula hantavirus populations. J. Virol. 70 (1996) 9060-9063
-
(1996)
J. Virol.
, vol.70
, pp. 9060-9063
-
-
Plyusnin, A.1
Cheng, Y.2
Lehvaslaiho, H.3
Vaheri, A.4
-
23
-
-
0036306528
-
Duration and fitness dependence of quasispecies memory
-
Ruiz-Jarabo C.M., Arias A., Molina-Paris C., Briones C., Baranowski E., Escarmis C., and Domingo E. Duration and fitness dependence of quasispecies memory. J. Mol. Biol. 315 (2002) 285-296
-
(2002)
J. Mol. Biol.
, vol.315
, pp. 285-296
-
-
Ruiz-Jarabo, C.M.1
Arias, A.2
Molina-Paris, C.3
Briones, C.4
Baranowski, E.5
Escarmis, C.6
Domingo, E.7
-
24
-
-
33746622123
-
Changes in mumps virus neurovirulence phenotype associated with quasispecies heterogeneity
-
Sauder C.J., Vandenburgh K.M., Iskow R.C., Malik T., Carbone K.M., and Rubin S.A. Changes in mumps virus neurovirulence phenotype associated with quasispecies heterogeneity. Virology 350 (2006) 48-57
-
(2006)
Virology
, vol.350
, pp. 48-57
-
-
Sauder, C.J.1
Vandenburgh, K.M.2
Iskow, R.C.3
Malik, T.4
Carbone, K.M.5
Rubin, S.A.6
-
25
-
-
0034990080
-
Genetic diversity in RNA virus quasispecies is controlled by host-virus interactions
-
Schneider W.L., and Roossinck M.J. Genetic diversity in RNA virus quasispecies is controlled by host-virus interactions. J. Virol. 75 (2001) 6566-6571
-
(2001)
J. Virol.
, vol.75
, pp. 6566-6571
-
-
Schneider, W.L.1
Roossinck, M.J.2
-
26
-
-
0036107695
-
Infectious cDNA clone of the epidemic west nile virus from New York City
-
Shi P.Y., Tilgner M., Lo M.K., Kent K.A., and Bernard K.A. Infectious cDNA clone of the epidemic west nile virus from New York City. J. Virol. 76 (2002) 5847-5856
-
(2002)
J. Virol.
, vol.76
, pp. 5847-5856
-
-
Shi, P.Y.1
Tilgner, M.2
Lo, M.K.3
Kent, K.A.4
Bernard, K.A.5
-
27
-
-
31144465690
-
Quasispecies diversity determines pathogenesis through cooperative interactions in a viral population
-
Vignuzzi M., Stone J.K., Arnold J.J., Cameron C.E., and Andino R. Quasispecies diversity determines pathogenesis through cooperative interactions in a viral population. Nature 439 (2006) 344-348
-
(2006)
Nature
, vol.439
, pp. 344-348
-
-
Vignuzzi, M.1
Stone, J.K.2
Arnold, J.J.3
Cameron, C.E.4
Andino, R.5
-
28
-
-
30644459759
-
Evolutionary influences in arboviral disease
-
Weaver S.C. Evolutionary influences in arboviral disease. Curr. Top. Microbiol. Immunol. 299 (2006) 285-314
-
(2006)
Curr. Top. Microbiol. Immunol.
, vol.299
, pp. 285-314
-
-
Weaver, S.C.1
-
29
-
-
0026505961
-
Genetic diversity and slow rates of evolution in New World alphaviruses
-
Weaver S.C., Rico-Hesse R., and Scott T.W. Genetic diversity and slow rates of evolution in New World alphaviruses. Curr. Top. Microbiol. Immunol. 176 (1992) 99-117
-
(1992)
Curr. Top. Microbiol. Immunol.
, vol.176
, pp. 99-117
-
-
Weaver, S.C.1
Rico-Hesse, R.2
Scott, T.W.3
-
30
-
-
0028052974
-
Evolution of alphaviruses in the eastern equine encephalomyelitis complex
-
Weaver S.C., Hagenbaugh A., Bellew L.A., Gousset L., Mallampalli V., Holland J.J., and Scott T.W. Evolution of alphaviruses in the eastern equine encephalomyelitis complex. J. Virol. 68 (1994) 158-169
-
(1994)
J. Virol.
, vol.68
, pp. 158-169
-
-
Weaver, S.C.1
Hagenbaugh, A.2
Bellew, L.A.3
Gousset, L.4
Mallampalli, V.5
Holland, J.J.6
Scott, T.W.7
-
31
-
-
0032924195
-
Genetic and fitness changes accompanying adaptation of an arbovirus to vertebrate and invertebrate cells
-
Weaver S.C., Brault A.C., Kang W., and Holland J.J. Genetic and fitness changes accompanying adaptation of an arbovirus to vertebrate and invertebrate cells. J. Virol. 73 (1999) 4316-4326
-
(1999)
J. Virol.
, vol.73
, pp. 4316-4326
-
-
Weaver, S.C.1
Brault, A.C.2
Kang, W.3
Holland, J.J.4
-
33
-
-
33744465847
-
A single amino acid substitution in the central portion of the West Nile virus NS4B protein confers a highly attenuated phenotype in mice
-
Wicker J.A., Whiteman M.C., Beasley D.W., Davis C.T., Zhang S., Schneider B.S., Higgs S., Kinney R.M., and Barrett A.D. A single amino acid substitution in the central portion of the West Nile virus NS4B protein confers a highly attenuated phenotype in mice. Virology 349 (2006) 245-253
-
(2006)
Virology
, vol.349
, pp. 245-253
-
-
Wicker, J.A.1
Whiteman, M.C.2
Beasley, D.W.3
Davis, C.T.4
Zhang, S.5
Schneider, B.S.6
Higgs, S.7
Kinney, R.M.8
Barrett, A.D.9
-
34
-
-
33748205133
-
A mutation in the envelope protein fusion loop attenuates mouse neuroinvasiveness of the NY99 strain of West Nile virus
-
Zhang S., Li L., Woodson S.E., Huang C.Y., Kinney R.M., Barrett A.D., and Beasley D.W. A mutation in the envelope protein fusion loop attenuates mouse neuroinvasiveness of the NY99 strain of West Nile virus. Virology 353 (2006) 35-40
-
(2006)
Virology
, vol.353
, pp. 35-40
-
-
Zhang, S.1
Li, L.2
Woodson, S.E.3
Huang, C.Y.4
Kinney, R.M.5
Barrett, A.D.6
Beasley, D.W.7
|