Combining comparative genomics with de novo motif discovery to identify human transcription factor DNA-binding motifs

BMC Bioinformatics

Volumn 7, Issue SUPPL.4, 2006, Pages

  Mao, Linyong ^a   Zheng, W Jim ^a  

^a MEDICAL UNIVERSITY OF SOUTH CAROLINA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CLUSTERING ANALYSIS; CO-REGULATED GENES; COMPARATIVE GENOMICS; HUMAN TRANSCRIPTION FACTORS; PREDICTION RATE; REGULATORY ELEMENTS; REGULATORY SIGNALS; UPSTREAM REGION;

SIGNAL PROCESSING; TRANSCRIPTION FACTORS;

GENES;

DNA; MUSCLE PROTEIN; MYOCYTE ENHANCER FACTOR 2; MYOGENIC FACTOR; TRANSCRIPTION FACTOR; PROTEIN BINDING;

ARTICLE; CLUSTER ANALYSIS; COMPARATIVE GENOMIC HYBRIDIZATION; COMPUTER PROGRAM; CONTROLLED STUDY; DNA BINDING; DNA FLANKING REGION; GENE IDENTIFICATION; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC CONSERVATION; GENETIC REGULATION; INTERMETHOD COMPARISON; MATHEMATICAL COMPUTING; METHODOLOGY; MICROARRAY ANALYSIS; PREDICTION; PROTEIN MOTIF; SENSITIVITY ANALYSIS; BINDING SITE; CHROMOSOME MAP; DNA MICROARRAY; DNA SEQUENCE; GENETICS; GENOMICS; HUMAN; MOLECULAR GENETICS; MULTIGENE FAMILY; NUCLEOTIDE SEQUENCE; PROCEDURES; REGULATORY SEQUENCE; REPRODUCIBILITY; SENSITIVITY AND SPECIFICITY; SEQUENCE ALIGNMENT;

AMINO ACID MOTIFS; BASE SEQUENCE; BINDING SITES; CHROMOSOME MAPPING; DNA; GENOMICS; HUMANS; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PROTEIN BINDING; REGULATORY ELEMENTS, TRANSCRIPTIONAL; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; TRANSCRIPTION FACTORS;

EID: 33947403188     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-7-S4-S21     Document Type: Article

References (18)

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