Near full-length genome characterization of three additional HIV type 1 CRF13_cpx strains from Cameroon

AIDS Research and Human Retroviruses

Volumn 23, Issue 2, 2007, Pages 297-302

  Luk, Ka Cheung ^a   Holzmayer, Vera ^a   Yamaguchi, Julie ^a   Swanson, Priscilla ^a   Brennan, Catherine A ^a   Ngansop, Charlotte ^b   Mbanya, Dora ^b   Gayum, Hermine ^c   Djuidje, Marcelline Ngounoue ^c   Ndembi, Nicaise ^c   Kamdem, Donatien ^c   Kaptué, Lazare ^c   Gürtler, Lutz ^d   Devare, Sushil G ^a   Hackett Jr , John ^a  

^a ABBOTT LABORATORIES   (United States)

^b UNIVERSITY OF YAOUNDÉ I   (Cameroon)

^c Higher Institute of Public Health Sciences   (Cameroon)

^d UNIVERSITY OF GREIFSWALD   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CAMEROON; EPIDEMIC; GENE CLUSTER; GENE SEQUENCE; GENE STRUCTURE; GENETIC VARIABILITY; HUMAN IMMUNODEFICIENCY VIRUS 1; MOSAICISM; NONHUMAN; PHYLOGENETIC TREE; PRIORITY JOURNAL; VIRUS GENOME; VIRUS RECOMBINANT; VIRUS RECOMBINATION; VIRUS STRAIN;

ADULT; CAMEROON; FEMALE; HIV INFECTIONS; HIV-1; HUMANS; MALE; MOLECULAR SEQUENCE DATA; PHYLOGENY; REASSORTANT VIRUSES; SEQUENCE ANALYSIS, RNA;

EID: 33947225784     PISSN: 08892229     EISSN: None     Source Type: Journal    
DOI: 10.1089/aid.2006.0177     Document Type: Article

References (12)

1. Osmanov S, Pattou C, Walker N, Schwardlander B, Esparza J, and WHO-UNAIDS Network for HIV Isolation and Characterization: Estimated global distribution and regional spread of HIV-1 genetic subtypes in the year 2000. J Acquir Immune Defic Syndr 2002;29:184-190.
2. Yamaguchi J, Bodelle P, Vallari AS, Coffey R, McArthur CP, Schochetman G, Devare SG, and Brennan CA: HIV infections in northwestern Cameroon: Identification of HIV-1 group O and dual HIV-1 group M and group O infections. AIDS Res Hum Retroviruses 2004;20:944-957.
3. Brennan CA, Bodelle P, Coffey R, Harris B, Holzmayer V, Luk KC, Swanson P, Yamaguchi J, Vallari A, Devare SG, Schochetman G, and Hackett J Jr: HIV global surveillance: Foundation for retroviral discovery and assay development. J Med Virol 2006;78:S24-S29.
4. Swanson P, Devare SG, and Hackett J Jr: Molecular characterization of 39 HIV-1 isolates representing group M (subtypes A-G) and group O: Sequence analysis of gag p24, pol integrase, and env gp41. AIDS Res Hum Retroviruses 2003;19:625-629.
5. Wilbe K, Casper C, Albert J, and Leitner T: Identification of two CRF11_cpx genomes and two preliminary representatives of a new circulating recombinant form (CRF13_cpx) of HIV type 1 in Cameroon. AIDS Res Hum Retroviruses 2002;18:849-856.
6. Zhang M, Wilbe K, Wolfe ND, Gaschen B, Carr JK, and Leitner T: HIV type 1 CRF13_cpx revisited: Identification of a new sequence from Cameroon and signal for subsubtype J2. AIDS Res Hum Retroviruses 2005;21:955-960.
7. Harris B, von Truchsess I, Schätzl HM, Devare SG, and Hackett J Jr: Genomic characterization of a novel HIV type 1 B/G intersubtype recombinant strain from an injecting drug user in Germany. AIDS Res Hum Retroviruses 2005;21:654-660.
8. Swanson P, Huang S, Holzmayer V, Bodelle P, Yamaguchi J, Brennan C, Badaro R, Brites C, Abravaya K, Devare SG, and Hackett J Jr: Performance of the automated Abbott RealTime™ HIV-1 assay on a genetically diverse panel of specimens from Brazil. J Virol Methods 2006;134:237-243.
9. Montavon C, Vergne L, Bourgeois A, Mpoudi-Ngole E, Malonga-Mouellet G, Butel C, Toure-Kane C, Delaporte E, and Peeters M: Identification of a new ciruculating recombinant form of HIV type 1, CRF11_cpx, involving subtypes A, G, J, and CRF01_AE, in Central Africa. AIDS Res Hum Retroviruses 2002;18:231-236.
10. Peeters M: Recombinant HIV sequences: Their role in the global epidemic. In: Human Retroviruses and AIDS 2000: A Compilation and Analysis of Nucleic Acid and Amino Acid Sequences (Kuiken C, Foley B, Hahn B, et al., eds.). Theoretical Biology and Biophysics Group, Los Alamos National Laboratory, Los Alamos, NM, 2000, pp. 39-54.
11. Ndembi N, Takehisa J, Zekeng L, Kobayashi E, Ngansop C, Songok EM, Kageyama S, Takemura T, Ido E, Hayami M, Kaptue L, and Ichimura H: Genetic diversity of HIV type 1 in rural eastern Cameroon. J Acquir Immune Defic Syndr 2004;37:1641-1650.
12. McCutchan FE: Global epidemiology of HIV. J Med Virol 2006;78:S7-S12.