Phylogeny of the freshwater crab genus Somanniathelphusa Bott (Decapoda:Parathelphusidae) from Taiwan and the coastal regions of China, with notes on their biogeography

Invertebrate Systematics

Volumn 21, Issue 1, 2007, Pages 29-37

  Shih, Hsi Te ^a   Fang, Shao Hua ^b   Ng, Peter K L ^c  

^a NATIONAL CHUNG HSING UNIVERSITY   (Taiwan)

^b Fujian Institute of Oceanology   (China)

^c NATIONAL UNIVERSITY OF SINGAPORE   (Singapore)

Author keywords

Cytochrome oxidase I; Glaciations; Mitochondrial 16S rRNA; Phylogeography; Somanniathelphusa

Indexed keywords

BIOLOGICAL INVASION; BIOMARKER; CLADISTICS; COASTAL ZONE; CRAB; ENZYME; FRESHWATER ENVIRONMENT; GLACIATION; HOME RANGE; INTRODUCED SPECIES; ISOLATED POPULATION; PHYLOGENY; PHYLOGEOGRAPHY; RNA;

ASIA; CHINA; EURASIA; FAR EAST; TAIWAN;

BRACHYURA; CRUSTACEA; DECAPODA (CRUSTACEA); PARATHELPHUSIDAE; SOMANNIATHELPHUSA;

EID: 33847793337     PISSN: 14455226     EISSN: None     Source Type: Journal    
DOI: 10.1071/IS06007     Document Type: Article

References (57)

1. Bahir, M. M., and Yeo, D. C. J. (2005). A revision of the genus Oziotelphusa Müller, 1887 (Crustacea: Decapoda: Parathelphusidae), with descriptions of eight new species. The Raffles Bulletin of Zoology 12, 77-120.
2. Balss, H. (1914). Potamonidenstudien. Zoologische Jahrbücher, Abtheilung für Systematik, Geographie und Biologie der Thiere 37, 401-410.
3. Boggs, S. J., Wang, W.-C., Lewis, F. S., and Chen, J.-C. (1979). Sediment properties and water characteristics of the Taiwan Shelf and Slope. Acta Oceanographica Taiwanica 10, 10-49.
4. Bott, R. (1968). Parathelphusiden aus Hinterindien (Crustacea, Decapoda, Parathelphsidae). Senckenbergiana Biologica 49, 403-422.
5. Bott, R. (1970). Die Süßwasserkrabben von Europa, Asien, Australien und ihre Stammesgeschichte. Abhandlungen der Senckenbergischen Naturforschenden Gesellschaft 526, 1-338.
6. Cai, B.-Q. (1999). The Late Pleistocene fossil mammals and the palaeogeographical environment of the Taiwan Strait. Journal of Xiamen University (Arts and Social Sciences) 140, 29-33. [in Chinese]
7. Chan, T.-Y., Ng, P. K. L., and Ng, N. K. (2005). The nomenclature and taxonomy of Eriocheir formosa Chan, Hung & Yu, 1995 (Brachyura, Varunidae) from Taiwan: a rebuttal to Tang et al. (2003, 2004). Crustaceana 78, 457-464. doi:10.1163/1568540054473459
8. Chiu, J.-K. (1964). Prevalence of Paragonimus infection in crab hosts in Taiwan. Bulletin of the Institute of Zoology, Academia Sinica 3, 63-73.
9. Crandall, K. A., and Fitzpatrick, J. F. J. (1996). Crayfish molecular systematics: using a combination of procedures to estimate phylogeny. Systematic Biology 45, 1-26. doi:10.2307/2413509
10. Cruickshank, R. H. (2002). Molecular markers for the phylogenetics of mites and ticks. Systematic and Applied Acarology 7, 3-14.
11. Dai, A.-Y. (1999). 'Fauna Sinica. Arthropoda: Crustacea: Malacostraca: Decapoda: Parathelphusidae, Potamidae.' (Science Press: Beijing, China.) [In Chinese]
12. Dai, A.-Y., Feng, Z.-Q., Chen, G.-X., and Song, Y.-Z. (1984). 'Medical Crustaceans in China.' (Science Press: Beijing, China.) [In Chinese]
13. Daniels, S. R. (2003). Examining the genetic structure among populations of the common Cape river crab Potamonautes perlatus from river systems in South Africa reveals hydrographic boundaries. Journal of Crustacean Biology 23, 936-950. doi:10.1651/C-2383
14. Daniels, S. R., Stewart, B. A., and Cook, P. A. (2002a). Congruent patterns of genetic variation in a burrowing freshwater crab revealed by allozymes and mtDNA sequence analysis. Hydrobiologia 468, 171-179. doi:10.1023/A:1015203909091
15. Daniels, S. R., Stewart, B. A., Gouws, G., Cunningham, M., and Matthee, C. A. (2002b). Phylogenetic relationships of the southern African freshwater crab fauna (Decapoda: Potamonautidae: Potamonautes) derived from multiple data sets reveal biogeographic patterning. Molecular Phylogenetics and Evolution 25, 511-523. doi:10.1016/S1055-7903(02) 00281-6
16. Daniels, S. R., Gouws, G., Stewart, B. A., and Coke, M. (2003). Molecular and morphometric data demonstrate the presence of cryptic lineages among freshwater crabs (Decapoda: Potamonautidae: Potamonautes) from the Drakensberg Mountains, South Africa. Biological Journal of the Linnean Society 78, 129-147. doi:10.1046/j.1095-8312.2003.00143.x
17. Daniels, S. R., Cumberlidge, N., Pérez-Losada, M., Marijnissen, S. A. E., and Crandall, K. A. (2006). Evolution of Afrotropical freshwater crab lineages obscured by morphological convergence. Molecular Phylogenetics and Evolution 40, 227-235. doi:10.1016/j.ympev.2006.02.022
18. Folmer, O., Black, M., Hoeh, W., Lutz, R., and Vrijenhoek, R. (1994). DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology and Biotechnology 3, 294-299.
19. Hall, T. A. (2001). 'BioEdit: A User-Friendly Biological Sequence Alignment Editor and Analysis, version 5.09.' (Department of Microbiology, North Carolina State University: Raleigh, North Carolina, USA.)
20. Ho, C.-K., Qi, G.-Q., and Chang, C.-H. (1997). A preliminary study of Late Pleistocene carnivore fossils from the Penghu Channel, Taiwan. Annual of Taiwan Museum 40, 195-224. . [In Chinese]
21. Ho, C.-K., Qi, G.-Q., and Chang, C.-H. (2000). Systematic description and classification of Late Pleistocene Palaeoloxodon. Annual of National Taiwan Museum 43, 49-105. . [In Chinese]
22. Ho, P.-H. (1998). True freshwater crabs (3). Fisheries Extension, Taipei 143, 9-12. . [In Chinese]
23. Hwang, J.-J., and Mizue, K. (1985). Fresh-water crabs of Taiwan. Bulletin of the Faculty of Fisheries, Nagasaki University 57, 1-21.
24. Hwang, U. W., and Kim, W. (1999). General properties and phylogenetic utilities of nuclear ribosomal DNA and mitochondrial DNA commonly used in molecular systematics. Korean Journal of Parasitology 37, 215-228.
25. Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution 16, 111-120. doi:10.1007/BF01731581
26. Koba, K. (1936). Studies on the Japanese Potamonidae (I): notes on Potamon rathbuni de Man as a second intermediate host of Paragonimus westermani (Kerbert) in Formosa. Transactions of the Natural History Society of Formosa 26, 164-174. [In Japanese]
27. Kumar, S., Tamura, K., Jakobsen, I. B., and Nei, M. (2001). MEGA2: molecular evolutionary genetics analysis software. Bioinformatics (Oxford, England) 17, 1244-1245. doi:10.1093/bioinformatics/17.12.1244
28. Li, Y.-S., and Lin, J.-X. (1994). Investigation on etiology of paragonimaisis in Minhou County, Fujian Province. Wuyi Science Journal 11, 162-166. [In Chinese]
29. Maki, M., and Tsuchiya, K. (1923). 'A Monograph of the Decapod Crustacea of Formosa.' (Department of Agriculture, Government Research Institute: Taihoku (=Taipei), Taiwan.) [In Japanese]
30. Minei, H. (1974). Potamoid crabs of Taiwan, with description of one new species (Crustacea, Decapoda). Journal of the Faculty of Agriculture, Kyushu University 18, 239-251.
31. Naiyanetr, P. (1994). On three new genera of Thai ricefield crabs allied to Somanniathelphusa Bott, 1968 (Crustacea: Decapoda: Brachyura: Parathelphusidae). The Raffles Bulletin of Zoology 42, 695-700.
32. Naiyanetr, P., and Dai, A.-Y. (1997). On eleven new species of freshwater crabs of the genus Somanniathelphusa Bott, 1968, from southern China (Crustacea: Decapoda: Brachyura: Parathelphusidae). The Raffles Bulletin of Zoology 45, 73-96.
33. Ng, P. K. L. (1988). 'The Freshwater Crabs of Peninsular Malaysia and Singapore.' (Shing Lee Publishers Ltd.: Singapore.)
34. Ng, P. K. L. (2000). Review of: Crustacea: Decapoda: Parathelphusidae, Potamidae. In 'Fauna Sinica'. (Ed. A.-Y. Dai 1999.) 501 pp. (Science Press: Beijing, China.) Crustaceana 73, 249-251. doi:10.1163/ 156854000504336
35. Ng, P. K. L., and Dudgeon, D. (1992). The Potamidae and Parathelphusidae (Crustacea: Decapoda: Brachyura) of Hong Kong. Invertebrate Taxonomy 6, 741-768. doi:10.1071/IT9920741
36. Ng, P. K. L., and Kosuge, T. (1995). On a new Somanniathelphusa Bott, 1968, from Vietnam (Crustacea: Decapoda: Brachyura: Parathelphusidae). Proceedings. Biological Society of Washington 108, 61-67.
37. Nylander, J. A. A. (2005). 'MrModeltest version 2.2.'Program distributed by the author. (Evolutionary Biology Centre, Uppsala University: Uppsala, Sweden.)
38. Posada, D., and Crandall, K. A. (1998). MODELTEST: testing the model of DNA substitution. Bioinformatics (Oxford, England) 14, 817-818. doi:10.1093/bioinformatics/14.9.817
39. Rathbun, M. J. (1905). Les crabes d'eau douce (Potamonidae). Nouvelles Archives du Muséum d'Histoire Naturelle 4ème série 7, 159-323.
40. Ronquist, F., and Huelsenbeck, J. P. (2003). MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics (Oxford, England) 19, 1572-1574. doi:10.1093/bioinformatics/btg180
41. Sakai, T. (1939). IV. Brachygnatha. Brachyrhyncha. In 'Studies on the Crabs of Japan'. pp. 365-741. (Yokendo Ltd.: Tokyo, Japan.)
42. Sakai, T. (1976). 'Crabs of Japan and the Adjacent Seas.' (Kodansha Ltd.: Tokyo, Japan.)
43. Schubart, C. D., Neigel, J. E., and Felder, D. L. (2000). Use of the mitochondrial 16S rRNA gene for phylogenetic and population studies of Crustacea. Crustacean Issues 12, 817-830.
44. Segawa, R. (2000). Molecular phylogeny of the genus Geothelphusa of Ryukyus Islands. Kaiyo Monthly 32, 241-245. [In Japanese]
45. Shih, H.-T., Ng, P. K. L., and Chang, H.-W. (2004). Systematics of the genus Geothelphusa (Crustacea, Decapoda, Brachyura, Potamidae) from southern Taiwan: a molecular appraisal. Zoological Studies 43, 561-570.
46. Shih, H.-T., Chen, G.-X., and Wang, L.-M. (2005). A new species of freshwater crab (Decapoda: Brachyura: Potamidae) from Dongyin Island, Matsu, Taiwan, defined by morphological and molecular characters, with notes on its biogeography. Journal of Natural History 39, 2901-2911. doi:10.1080/00222930500214010
47. Shih, H.-T., Hung, H.-C., Schubart, C. D., Chen, C. A., and Chang, H.-W. (2006). Intraspecific genetic diversity of the endemic freshwater crab Candidiopotamon rathbunae (Decapoda, Brachyura, Potamidae) reflects five million years of geological history of Taiwan. Journal of Biogeography 33, 980-989. doi:10.1111/j.1365-2699.2006.01472.x
48. Shih, H.-T., Ng, P. K. L., Schubart, C. D., and Chang, H.-W. (2007). Phylogeny and phylogeography of the genus Geothelphusa (Crustacea: Decapoda, Brachyura, Potamidae) in southwestern Taiwan based on two mitochondrial genes. Zoological Science 24, 57-66.
49. Shy, J.-Y., and Yu, H.-P. (1999). 'Freshwater Crabs of Taiwan.' (National Museum of Marine Biology/Aquarium: Kaohsiung, Taiwan.) [In Chinese]
50. Shy, J.-Y., Lai, H.-T., and Yu, H.-P. (1996). On the freshwater shrimps and crabs from the three southwestern counties Yunlin, Chiayi and Tainan of Taiwan. Annual of Taiwan Museum 39, 201-247. [In Chinese]
51. Swofford, D. L. (2003). 'PAUP*. Phylogenetic Analysis Using Parsimony (and Other Methods), version 4.' (Sinauer Associates: Sunderland, Massachusetts, USA.)
52. Terao, S. (1915). The second intermediate host of lung Distoma (IV). Zoological Magazine 27, 642. [In Japanese]
53. Thompson, J. D., Higgins, D. G., and Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22, 4673-4680. doi:10.1093/nar/22.22.4673
54. Voris, H. K. (2000). Maps of Pleistocene sea levels in Southeast Asia: shorelines, river systems and time durations. Journal of Biogeography 27, 1153-1167. doi:10.1046/j.1365-2699.2000.00489.x
55. Yeo, D. C. J., and Ng, P. K. L. (1999). The state of freshwater crab taxonomy in Indochina (Decapoda, Brachyura). In 'Crustaceans and the Biodiversity Crisis, Proceedings of the Fourth International Crustacean Congress, 1998, Vol. I'. (Eds F. R. Schram and J. C. von Vaupel Klein.) pp. 637-646. (Brill: Leiden, the Netherlands.)
56. Yeo, D. C. J., and Nguyen, X. Q. (1999). Description of a new species of Somanniathelphusa (Decapoda, Brachyura, Parathelphusidae) from Vietnam. Crustaceana 72, 339-349. doi:10.1163/156854099503410
57. You, Y.-Z., Dong, X.-R., Cai, B.-Q., and Sun, Y.-L. (1995). The mammalian fossils from western Taiwan Strait. Vertebrata PalAsiatica 33, 231-237. [In Chinese]