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Volumn 6, Issue 4, 2007, Pages 478-488

A probabilistic model for cell cycle distributions in synchrony experiments

Author keywords

Cell cycle; Population distribution; Probabilistic model; Synchrony

Indexed keywords

ARTICLE; CELL CYCLE; CELL DIVISION; CELL GROWTH; CELL POPULATION; CELLULAR DISTRIBUTION; CONTROLLED STUDY; NONHUMAN; SACCHAROMYCES CEREVISIAE; SCHIZOSACCHAROMYCES;

EID: 33847770912     PISSN: 15384101     EISSN: 15514005     Source Type: Journal    
DOI: 10.4161/cc.6.4.3859     Document Type: Article
Times cited : (32)

References (35)
  • 1
    • 0036628541 scopus 로고    scopus 로고
    • Analysis of cell-cycle gene expression in Saccharomyces cerevisiae using microarrays and multiple synchronization methods
    • Shedden K, Cooper S. Analysis of cell-cycle gene expression in Saccharomyces cerevisiae using microarrays and multiple synchronization methods. Nucleic Acids Res 2002; 30:2920-9.
    • (2002) Nucleic Acids Res , vol.30 , pp. 2920-2929
    • Shedden, K.1    Cooper, S.2
  • 2
    • 0035985177 scopus 로고    scopus 로고
    • Identification of genes periodically expressed in the human cell cycle and their expression in tumors
    • Whitfield ML, Sherlock G, Saldanha AJ, Murray JI, Ball CA, et al. Identification of genes periodically expressed in the human cell cycle and their expression in tumors. Mol Biol Cell 2002; 13:1977-2000.
    • (2002) Mol Biol Cell , vol.13 , pp. 1977-2000
    • Whitfield, M.L.1    Sherlock, G.2    Saldanha, A.J.3    Murray, J.I.4    Ball, C.A.5
  • 3
    • 0042838315 scopus 로고    scopus 로고
    • Expression deconvolution: A reinterpretation of DNA microarray data reveals dynamic changes in cell populations
    • Lu P, Nakorchevskiy A, Marcotte EM. Expression deconvolution: A reinterpretation of DNA microarray data reveals dynamic changes in cell populations. PNAS 2003; 100:10370-75.
    • (2003) PNAS , vol.100 , pp. 10370-10375
    • Lu, P.1    Nakorchevskiy, A.2    Marcotte, E.M.3
  • 4
    • 8844241676 scopus 로고    scopus 로고
    • Deconvolving cell cycle expression data with complementary information
    • Bar-Joseph Z, Farkash S, Gifford DK, Simon I, Rosenfeld R. Deconvolving cell cycle expression data with complementary information. Bioinformatics 2004; 20(Suppl 1):123-130.
    • (2004) Bioinformatics , vol.20 , Issue.SUPPL. 1 , pp. 123-130
    • Bar-Joseph, Z.1    Farkash, S.2    Gifford, D.K.3    Simon, I.4    Rosenfeld, R.5
  • 5
    • 33645804629 scopus 로고    scopus 로고
    • Polynomial model approach for resynchronization analysis of cell-cycle gene expression data
    • Qiu P, Wang ZJ, Liu JR. Polynomial model approach for resynchronization analysis of cell-cycle gene expression data. Bioinformatics 2006; 22:959-66.
    • (2006) Bioinformatics , vol.22 , pp. 959-966
    • Qiu, P.1    Wang, Z.J.2    Liu, J.R.3
  • 6
    • 0015193588 scopus 로고
    • Genetic control of the cell division cycle in yeast
    • Hartwell L. Genetic control of the cell division cycle in yeast. Experimental Cell Res 1971; 69:265-76.
    • (1971) Experimental Cell Res , vol.69 , pp. 265-276
    • Hartwell, L.1
  • 7
    • 0017359404 scopus 로고
    • Fractionation of Saccharomyces cerevisiae cell populations by centrifugal elutriation
    • Gordon CN, Elliott SC. Fractionation of Saccharomyces cerevisiae cell populations by centrifugal elutriation. J Bacteriol 1977; 129:97-100.
    • (1977) J Bacteriol , vol.129 , pp. 97-100
    • Gordon, C.N.1    Elliott, S.C.2
  • 8
    • 0017581306 scopus 로고
    • Coordination of growth with cell division in the yeast S. cerevisiae
    • Johnston GC, Pringle JP, Hartwell LH. Coordination of growth with cell division in the yeast S. cerevisiae. Exp Cell Res 1977; 105:75-98.
    • (1977) Exp Cell Res , vol.105 , pp. 75-98
    • Johnston, G.C.1    Pringle, J.P.2    Hartwell, L.H.3
  • 9
    • 85078505418 scopus 로고    scopus 로고
    • Improved flow cytometric analysis of the budding yeast cell cycle
    • Haase SB, Reed SI. Improved flow cytometric analysis of the budding yeast cell cycle. Cell Cycle 2002; 1:132-6.
    • (2002) Cell Cycle , vol.1 , pp. 132-136
    • Haase, S.B.1    Reed, S.I.2
  • 10
    • 0017527790 scopus 로고    scopus 로고
    • Cell cycle of Saccharomyces cerevisiae in populations growing at different rates
    • Slater ML, Sharrow SO, Gart JJ. Cell cycle of Saccharomyces cerevisiae in populations growing at different rates. Proc Natl Acad Sci USA 1997; 74:3850-4.
    • (1997) Proc Natl Acad Sci USA , vol.74 , pp. 3850-3854
    • Slater, M.L.1    Sharrow, S.O.2    Gart, J.J.3
  • 11
    • 0016807084 scopus 로고
    • Unique techniques for cell analysis utilizing mithramycin and flow microfluorometry
    • Tobey RA, Crissman HA. Unique techniques for cell analysis utilizing mithramycin and flow microfluorometry. Exp Cell Res 1975; 93:235-9.
    • (1975) Exp Cell Res , vol.93 , pp. 235-239
    • Tobey, R.A.1    Crissman, H.A.2
  • 13
    • 0029321234 scopus 로고
    • A survey of structured cell population dynamics
    • Arino O. A survey of structured cell population dynamics. Acta Biotheor 1995; 43:3-25.
    • (1995) Acta Biotheor , vol.43 , pp. 3-25
    • Arino, O.1
  • 14
    • 0142122311 scopus 로고    scopus 로고
    • Dynamic modeling of microbial cell populations
    • Henson MA. Dynamic modeling of microbial cell populations. Curr Opin Biotechnol 2003; 14:460-7.
    • (2003) Curr Opin Biotechnol , vol.14 , pp. 460-467
    • Henson, M.A.1
  • 15
    • 5044222331 scopus 로고    scopus 로고
    • Modelling of mammalian cells and cell culture processes
    • Sidoli FR, Mantalaris A, Asprey SP. Modelling of mammalian cells and cell culture processes. Cytotechnology 2004; 44:27-46.
    • (2004) Cytotechnology , vol.44 , pp. 27-46
    • Sidoli, F.R.1    Mantalaris, A.2    Asprey, S.P.3
  • 16
    • 0031149205 scopus 로고    scopus 로고
    • Solutions of population balance models based on a successive generations approach
    • Liou JJ, Srienc F, Fredrickson AG. Solutions of population balance models based on a successive generations approach. Chem Eng Sci 1997; 52:1529-40.
    • (1997) Chem Eng Sci , vol.52 , pp. 1529-1540
    • Liou, J.J.1    Srienc, F.2    Fredrickson, A.G.3
  • 17
    • 0035438332 scopus 로고    scopus 로고
    • On the existence of the stable birth-type distribution in a general branching process cell cycle model with unequal cell division
    • Alexandersson M. On the existence of the stable birth-type distribution in a general branching process cell cycle model with unequal cell division. J Appl Probab 2001; 38:685-95.
    • (2001) J Appl Probab , vol.38 , pp. 685-695
    • Alexandersson, M.1
  • 18
    • 0017660982 scopus 로고
    • Unequal division in Saccharomyces cerevisiae and its implications for the control of cell division
    • Hartwell L, Unger M. Unequal division in Saccharomyces cerevisiae and its implications for the control of cell division. J Cell Biol 1977; 75:422-35.
    • (1977) J Cell Biol , vol.75 , pp. 422-435
    • Hartwell, L.1    Unger, M.2
  • 19
    • 0019022991 scopus 로고
    • Asymmetrical division of Saccharomyces cerevisiae
    • Lord PG, Wheals AE. Asymmetrical division of Saccharomyces cerevisiae. J Bacteriol 1980; 142:808-18.
    • (1980) J Bacteriol , vol.142 , pp. 808-818
    • Lord, P.G.1    Wheals, A.E.2
  • 20
    • 0019731956 scopus 로고
    • Variability in individual cell cycles of Saccharomyces cerevisiae
    • Lord PG, Wheals AE. Variability in individual cell cycles of Saccharomyces cerevisiae. J Cell Sci 1981; 50:361-76.
    • (1981) J Cell Sci , vol.50 , pp. 361-376
    • Lord, P.G.1    Wheals, A.E.2
  • 21
    • 0027155830 scopus 로고
    • Volume growth of daughter and parent cells during the cell cycle of Saccharomyces cerevisiae a/alpha as determined by image cytometry
    • Woldringh CL, Huls PG, Vischer NO. Volume growth of daughter and parent cells during the cell cycle of Saccharomyces cerevisiae a/alpha as determined by image cytometry. J Bacteriol 1993; 175:3174-81.
    • (1993) J Bacteriol , vol.175 , pp. 3174-3181
    • Woldringh, C.L.1    Huls, P.G.2    Vischer, N.O.3
  • 23
    • 0035114070 scopus 로고    scopus 로고
    • 1 cell cycle delay and downregulation of cln3/cdc28 activity in Saccharomyces cerevisiae
    • 1 cell cycle delay and downregulation of cln3/cdc28 activity in Saccharomyces cerevisiae. Mol Microbiol 2007; 39:1022-35.
    • (2007) Mol Microbiol , vol.39 , pp. 1022-1035
    • Belli, G.1    Gari, E.2    Aldea, M.3    Herrero, E.4
  • 24
    • 0017186833 scopus 로고
    • Estimation of the length of cell cycle phases from asynchronous cultures of Saccharomyces cerevisiae
    • Barford JP, Hall RJ. Estimation of the length of cell cycle phases from asynchronous cultures of Saccharomyces cerevisiae. Exp Cell Res 1976; 102:276-84.
    • (1976) Exp Cell Res , vol.102 , pp. 276-284
    • Barford, J.P.1    Hall, R.J.2
  • 25
    • 29544443112 scopus 로고    scopus 로고
    • Coherence and timing of cell cycle start examined at single-cell resolution
    • Bean JM, Siggia ED, Cross FR. Coherence and timing of cell cycle start examined at single-cell resolution. Mol Cell 2006; 21:3-14.
    • (2006) Mol Cell , vol.21 , pp. 3-14
    • Bean, J.M.1    Siggia, E.D.2    Cross, F.R.3
  • 26
    • 10344222155 scopus 로고    scopus 로고
    • How cells coordinate growth and division
    • Jorgensen P, Tyers M. How cells coordinate growth and division. Curr Biol 2004; 14:R1014-27.
    • (2004) Curr Biol , vol.14
    • Jorgensen, P.1    Tyers, M.2
  • 27
    • 3543042493 scopus 로고    scopus 로고
    • Periodic gene expression program of the fission yeast cell cycle
    • Rustici G, Mata J, Kivinen K, Lio P, Penkett CJ, et al. Periodic gene expression program of the fission yeast cell cycle. Nat Genet 2004; 36:809-17.
    • (2004) Nat Genet , vol.36 , pp. 809-817
    • Rustici, G.1    Mata, J.2    Kivinen, K.3    Lio, P.4    Penkett, C.J.5
  • 28
    • 33747379083 scopus 로고    scopus 로고
    • The forkhead transcription factor Hcm1 regulates chromosome segregation genes and fills the S-phase gap in the transcriptional circuitry of the cell cycle
    • Pramila T, Wu W, Miles S, Noble WS, Breeden LL. The forkhead transcription factor Hcm1 regulates chromosome segregation genes and fills the S-phase gap in the transcriptional circuitry of the cell cycle. Genes Dev 2006; 20:2266-78.
    • (2006) Genes Dev , vol.20 , pp. 2266-2278
    • Pramila, T.1    Wu, W.2    Miles, S.3    Noble, W.S.4    Breeden, L.L.5
  • 29
    • 3542993849 scopus 로고    scopus 로고
    • Starting to recycle
    • Sherlock G. Starting to recycle. Nat Genet 2004; 36:795-6.
    • (2004) Nat Genet , vol.36 , pp. 795-796
    • Sherlock, G.1
  • 30
    • 20044366888 scopus 로고    scopus 로고
    • Identification of cell cycle-regulated genes in fission yeast
    • Peng X, Karuturi RK, Miller LD, Lin K, Jia Y, et al. Identification of cell cycle-regulated genes in fission yeast. Mol Biol Cell 2005; 16:1026-42.
    • (2005) Mol Biol Cell , vol.16 , pp. 1026-1042
    • Peng, X.1    Karuturi, R.K.2    Miller, L.D.3    Lin, K.4    Jia, Y.5
  • 31
    • 0033598334 scopus 로고    scopus 로고
    • 1 events in the budding yeast cell cycle
    • 1 events in the budding yeast cell cycle. Nature 1999; 401:394-7.
    • (1999) Nature , vol.401 , pp. 394-397
    • Haase, S.B.1    Reed, S.I.2
  • 32
    • 0003860037 scopus 로고
    • Gilks WR, Richardson S, Spiegelhalter DJ eds, London: Chapman and Hall
    • Gilks WR, Richardson S, Spiegelhalter DJ eds. Markov Chain Monte Carlo in Practice. London: Chapman and Hall, 1995.
    • (1995) Markov Chain Monte Carlo in Practice
  • 34
    • 0020850136 scopus 로고
    • Simulation run length control in the presence of an initial transient
    • Heidelberger P, Welch PD. Simulation run length control in the presence of an initial transient. Oper Res 1983; 31:1109-44.
    • (1983) Oper Res , vol.31 , pp. 1109-1144
    • Heidelberger, P.1    Welch, P.D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.