Cloning, expression and functional analysis of a novel-chemokine gene of Japanese flounder, Paralichthys olivaceus, containing two additional cysteines and an extra fourth exon

Fish and Shellfish Immunology

Volumn 22, Issue 6, 2007, Pages 651-662

  Khattiya, Rutch ^a   Kondo, Hidehiro ^a   Hirono, Ikuo ^a   Aoki, Takashi ^a  

^a TOKYO UNIVERSITY OF MARINE SCIENCE AND TECHNOLOGY   (Japan)

Author keywords

CC chemokine; Cytokine; Flounder chemokine; Gene structure

Indexed keywords

MAMMALIA; PARALICHTHYS; PARALICHTHYS OLIVACEUS; PLEURONECTOIDEI;

EID: 33847760717     PISSN: 10504648     EISSN: 10959947     Source Type: Journal    
DOI: 10.1016/j.fsi.2006.08.012     Document Type: Article

References (39)

1. Van Coillie E., Van Damme J., and Opdenakker G. The MCP/eotaxin subfamily of CC chemokines. Cytokine Growth Factor Rev 10 (1999) 61-86
2. Fernandez E.J., and Lolis E. Structure, function, and inhibition of chemokines. Annu Rev Pharmacol Toxicol 42 (2002) 469-499
3. Vaddi K., Keller M., and Newton R.C. The chemokine facts book (1997), Academic Press, New York
4. Baggiolini M. Chemokines and leukocyte traffic. Nature 392 (1998) 565-568
5. Rossi D.L., Hardiman G., Copeland N.G., Gilbert D.J., Jenkins N., Zlotnik A., et al. Cloning and characterization of a new type of mouse chemokine. Genomics 47 (1998) 163-170
6. Pan Y., Lloyd C., Zhou H., Dolich S., Deeds J., Gonzalo J.A., et al. Neurotactin, a membrane-anchored chemokine upregulated in brain inflammation. Nature 387 (1997) 611-617
7. Dixon B., Shum B., Adams A.J., Magor K.E., Hedrick R.O., Muir D.G., et al. CK-1, a putative chemokine of rainbow trout (Oncorhynchus mykiss). Immunol Rev 166 (1998) 341-348
8. Fujiki K., Shin D.H., Nakao M., and Yano T. Molecular cloning of carp (Cyprinus carpio) CC chemokine, CXC chemokine receptors, allograft inflammatory factor-1, and natural killer cell enhancing factor by use of suppression subtractive hybridization. Immunogenetics 49 (1999) 909-914
9. Liu L., Fujiki K., Dixon B., and Sundick R.S. Cloning of a novel rainbow trout (Oncorhynchus mykiss) CC chemokine with a fractalkine-like stalk and a TNF decoy receptor using cDNA fragments containing AU-rich elements. Cytokine 17 (2001) 71-81
10. Kono T., Kusuda R., Kawahara E., and Sakai M. The analysis of immune response of a novel CC-chemokine gene from Japanese flounder Paralichthys olivaceus. Vaccine 21 (2003) 446-457
11. Khattiya R., Hirono I., and Aoki T. Molecular cloning, gene structure and expression of two CC chemokines from Japanese flounder Paralichthys olivaceus. Fish Sci 68 (2003) 1063-1072
12. Laing K.J., and Secombes C.J. Trout CC chemokines: comparison of their sequences and expression patterns. Mol Immunol 41 (2004) 793-808
13. Laing K.J., and Secombes C.J. Chemokines. Dev Comp Immunol 28 (2004) 443-460
14. Peatman E., Bao B., Baoprasertkul P., and Liu Z. In silico identification and expression analysis of 12 novel CC chemokines in catfish. Immunogenetics 57 (2005) 409-419
15. Peatman E., and Liu Z. CC chemokines in zebrafish: Evidence for extensive intrachromosomal gene duplications. Genomics 88 (2006) 381-385
16. Najakshin A.M., Mechetina L.V., Alabyev B.Y., and Taranin A.V. Identification of an IL-8 homolog in lamprey (Lampetra fluviatilis): early evolutionary divergence of chemokines. Eur J Immunol 29 (1999) 375-382
17. Lee E.Y., Park H.H., Kim Y.T., and Choi T.J. Cloning and sequence analysis of the interleukin-8 gene from flounder (Paralichthys olivaceous). Gene 274 (2001) 237-243
18. Savan R., Kono T., Aman A., and Sakai M. Isolation and characterization of CXC chemokine in common carp (Cyprinus carpio L.). Mol Immunol 39 (2003) 829-834
19. Edgerton M.D., Gerlach L., Boeson T.P., and Allet B. Expression of chemokines in Escherichia coli. Methods Mol Biol 138 (2000) 33-40
20. Lally J., Al-Anout F., Bols N., and Dixon B. The functional characterization of CK-1, a putative CC chemokine from rainbow trout (Oncorhynchus mykiss). Fish Shellfish Immunol 15 (2003) 411-424
21. Nam B.H., Hirono I., and Aoki T. Bulk isolation of immune response-related genes by expressed sequenced tags of Japanese flounder Paralichthys olivaceous leucocytes stimulated with ConA/PMA. Fish Shellfish Immunol 14 (2003) 467-476
22. Katagiri T., Asakawa S., Hirono I., Aoki T., and Shimuzu N. Genomic BAC library of Japanese flounder Paralichthys olivaceus. Mar Biotechnol 2 (2000) 571-576
23. Hirono I., Nam B.H., Kurobe T., and Aoki T. Molecular cloning, characterization, and expression of TNF cDNA and gene from Japanese flounder Paralichthys olivaceus. J Immunol 165 (2000) 4423-4427
24. Nielsen H., Engelbrecht J., Brunak S., and Heijne G. Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. Protein Eng 10 (1997) 1-6
25. Katagiri T., Hirono I., and Aoki T. Identification of a cDNA for medaka cytoskeleton β-actin and construction for the reverse transcriptase-polymerase chain reaction (RT-PCR) primers. Fish Sci 63 (1997) 73-76
26. Park C.I., Kurobe T., Hirono I., and Aoki T. Cloning and characterization of cDNAs for two distinct tumor necrosis factor receptor superfamily genes from Japanese flounder Paralichthys olivaceus. Dev Comp Immunol 27 (2003) 365-375
27. Van Damme J., and Conings R. Assays for chemotaxis. In: Balkwill P.R. (Ed). Cytokines; a practical approach (1995), Oxford University Press, New York 215-224
28. Huising M.O., Stolte E., Flik G., Savelkoul H.F.J., and Verburg-van Kemenade B.M. CXC chemokines and leukocyte chemotaxis in common carp (Cyprinus carpio L.). Dev Comp Immunol 27 (2003) 875-888
29. Chen C.A., and Shyu A. AU-rich elements, characterization and importance in mRNA degradation. Trends Biochem Sci 20 (1995) 465-470
30. Hansen J.E., Lund O., Tolstrup N., Gooley A.A., Williams K.L., and Brunak S. NetOglyc: Prediction of mucin type O-glycosylation sites based on sequence context and surface accessibility. Glycoconjugate J 15 (1998) 115-130
31. Hedrick J.A., and Zlotnik A. Identification and characterization of a novel β chemokine containing six conserved cysteines. J Immunol 159 (1997) 1589-1593
32. Van Coillie E., Proost P., Van Aelst I., Struyf S., Polfliet M., De Meester I., et al. Functional comparison of two human monocyte chemotactic protein-2 isoforms, role of the amino-terminal pyroglutamic acid and processing by CD26/dipeptidyl peptidase IV. Biochemistry 37 (1998) 12672-12680
33. Zhang Y.J., Rutledge B.J., and Rollins B.J. Structure/activity analysis of human monocyte chemoattractant protein-1 (MCP-1) by mutagenesis. Identification of a mutated protein that inhibits MCP-1-mediated monocyte chemotaxis. J Biol Chem 269 (1994) 15918-15924
34. Kitamura M., Nakajima T., Imai T., Harada S., Combadiere C., Tiffany H.L., et al. Molecular cloning of human eotaxin, an eosinophil-selective CC chemokine, and identification of a specific eosinophil eotaxin receptor, CC chemokine receptor 3. J Biol Chem 271 (1996) 7725-7730
35. Graham G.J., Wilkinson P.C., Nibbs R.J., Lowe S., Kolset S.O., Parker A., et al. Uncoupling of stem cell inhibition from monocyte chemoattraction in MIP-1α by mutagenesis of the proteoglycan binding site. EMBO J 15 (1996) 6506-6515
36. Kuroda N., Uinuk-ool T.S., Sato A., Samonte I.E., Figueroa F., Mayer W.E., et al. Identification of chemokines and a chemokine receptor in cichlid fish, shark and lamprey. Immunogenetics 54 (2003) 884-895
37. Menten P., Wuyts A., and Van Damme J. Macrophage inflammatory protein-1. Cytokine Growth Factor Rev 13 (2002) 455-481
38. Ponath P.D., Qin S., Ringler D.J., Clark-Lewis I., Wang J., Kassam N., et al. Cloning of the human eosinophil chemoattractant, eotaxin. Expression, receptor binding, and functional properties suggest a mechanism for the selective recruitment of eosinophils. J Clin Invest 97 (1996) 604-612
39. Gu L., Tseng S.C., and Rollins B.J. Monocyte chemoattractant protein-1. Chem Immunol 72 (1999) 7-29