Investigation of properties of infrared absorption of α-helix protein molecules

International Journal of Infrared and Millimeter Waves

Volumn 27, Issue 5, 2006, Pages 735-752

  Pang, Xiao Feng ^a,b   Zhang, Huai Wu ^a  

^a UNIVERSITY OF ELECTRONIC SCIENCE AND TECHNOLOGY OF CHINA   (China)

^b INTERNATIONAL CENTRE FOR MATERIALS PHYSICS   (China)

Author keywords

helix protein molecule; Bio energy transport; Biological effect; Infrared absorption; Mechanism; Property

Indexed keywords

BIO ENERGY TRANSPORT; BIOLOGICAL EFFECT; BIVINE SERUM ALBUMEN (BSA); INFRARED ABSORPTION; INFRARED LIGHTS;

ENERGY TRANSFER; INFRARED RADIATION; MOLECULAR BIOLOGY; MOLECULAR DYNAMICS; MOLECULAR STRUCTURE;

PROTEINS;

EID: 33847307570     PISSN: 01959271     EISSN: 15729559     Source Type: Journal    
DOI: 10.1007/s10762-006-9118-3     Document Type: Article

References (83)

1. Pang Xiao-feng, experimental studies on properties of infrared lights absorbed by biological tissues, Inter. J.Inf. Mill. Waves, this Volume
2. Chen Kun, Chen Xi and Zhou Lin, The application of bio-frequency spectrum to medicine, The peoples Medical Publishing House, Beijing 1995
3. Pang Xiao-feng, thermally biological effects and its medical functions of the infrared rays absorbed by living systems, Inter. J Inf. Mill.Waves, 23(2002) 375;
4. Pang Xiao-feng, investigation on molecular mechanism cured sickness for infrared medical-instrument, Chin. J. BioMed. Engineering 8(1999)39;
5. the biological effect and medical functions of the infrared rays, ibid 10(2001)613;
6. A. S. Davydov, soliton and energy transfer along protein molecules, J. Theor. Biol. 38 (1973) 559;
7. solitons in molecular systems, Phys. Scr. 20 (1979) 387;
8. Physica 3D (1981)1;
9. biology and quantum mechanics, (Pergaman, New York 1982);
10. nd ed 1991)
11. P.L.Christiansen and A.C.Scott, Davydov's soliton revisited, Plenum Press, New york, 1990.
12. A.C.Scott.dynamics of Davydov soliton, Phys. Rev. A26(1982) 578;
13. the vibrational structure of Davydov soliton, Phys. Scr.25 (1982) 651;
14. Davydov soliton, Phys. Rep.217 (1992) 1;
15. Davydov's soliton revisited, Physica 51D(1990)33.
16. D.W.Brown, balanacing the Schrodinger equation with Davydov solitons, Phys. Rev. A37, (1988) 5010;
17. D.W.Brown, Z.Ivic, unification of polaron and soliton theory of excitation transport, Phys. Rev.B4 (1989) 9876;
18. Z.Ivic, D.W.Brown, soliton excitations of a small-polaron band, Phys. Rev. Lett. 63(1989) 426;
19. D.W.Brown.B.J.West, K.Lindenberg, Davydov soliton: new results at variance with standard derivations, Phys.Rev.A33 (1986)4104and4110.
20. Pang Xiao-feng, soliton transport of incorporate energy in living systems, Chin. J. Biochem.Biophys. 18(1986)1;
21. a new model of energy transport in organic molecules, Chin. J.Atom. Mol. Phys.6 (1986)1986;
22. analytic solutions of Davydov model in protein molecules, Chin. Appl. Math. 10(1986)276
23. J.P.Cottingham and J.W.Schweitzer, calculation of the lifetime of the Davydov soliton at finite temperature, Phys. Rev. Lett. 62(1989) 1792;
24. J.W.Schweitzer, the lifetime of the Davydov soliton, Phys. Rev. A45(1992) 8914
25. X.Wang, D.W.Brown, K.Lindenberg, vibron solitons, Phys. Rev. B 39(1989)5366;
26. quantum Monte Carlo simulations of the Davydov model, Phys.Rev. Lett.62(1989) 1796
27. L.Cruzeio-Hansson, mechanism of thermal destabilization of the Davydov soliton, Phys. Rev. A45(1992) 4111;
28. two reasons why the Davydov soliton may be thermally stable after all, Phys. Rev. Lett. 73(1994) 2929;
29. finite temperature simulations of the semiclassical Davydov model, Physica 68D(1993)65
30. W. Förner, quantum and disorder effects in Davydov soliton, Phys. Rev. A44(1991)2694;
31. Davydov soliton dynamics: two-quantum states and diagonal disorder, J.Phys. Condensed matter 3(1991)3235;
32. Davydov soliton dynamics: temperature effect,4(1992) 4333;
33. effect of temperature and interchain coupling on Davydov solitons, Physica 68D(1993)68;
34. 2〉 state, J. Phys. Condensed matter 10(1998)2631.
35. P.S.Lomdahl and W.C.Kerr, do Davydov solitons exist at 300K? Phys.Rev.Lett.55(1985)1235;
36. W.C.Kerr, P.S.Lomdahl, quantum mechanical derivation of the equations of motion for Davydov soliton, Phys.Rev. B35(1989)3629
37. Pang Xiao-feng, an improvement of the Davydov theory of bioenergy transport in protein molecular systems, Phys. Rev.E62(2000)6989;
38. the lifetime of the soliton in the improved Davydov model at the biological temperature 300K for protein molecules, European.Phys.J.B19(2) (2001)297;
39. the properties of collective excitation in organic protein molecular systems, J. Phys. Condensed Matter.2(1990)9541;
40. the effects of Raman scattering accompanied by the soliton excitation occurring in molecular crystals, Physica D105(2001);
41. the specific heat of the soliton appeared in protein, Chin.Phys.Lett.10(1993)381;
42. quantum-mechanical method of the equation in the protein, ibid, 10(1993)437;
43. the stability of the soliton excited in the protein in biological temperature, ibid, 10(1993)573;
44. the thermodynamic properties of the soliton excited in protein, Chinese Science Bulletin, 38(1993) 1572;
45. the properties of the soliton in the protein molecules with nonlinear neighboring interaction, ibid, 38(1993)1665;
46. Pang Xiao-feng and H. J. W. Muller-Kersten, dynamic properties of proton transfer in hydrogen-bonded molecular systems, J. Phys. Condensed matter 12 (2000) 885;
47. Pang Xiao-feng and Zhang Huai-Wu et al, state and properties of the soliton transported bio-energy in nonuniform protein molecules at physiological temperature, Phys. Lett. A 335(2005) 408
48. Pang Xiao-feng, the theory of nonlinear quantum mechanics,Chinese Chongqing Press, Chongqing 1994;
49. Soliton Physics, Sichuan Sci. Techno. Press, Chengdu, 2003;
50. Pang Xiao-feng and Feng Yuan-ping, Quantum mechanism in nonlinear systems, World Science Publishing Co., New Jersey, 2005;
51. Pang Xiao-feng, Zhang Huai-Wu,and Yu Jia-feng et al, thermal stability of the new soliton transported bio-energy under influence of fluctuations of characteristic Parameters at biological temperature in the protein molecules, Int. J. Modern Physics, 619(2005)4677;
52. Pang Xiao-feng, Zhang Huai-Wu et al, influences of heat bath and structure disorder in protein molecules on the soliton transported bio-energy in the improved model, J.Phys. condensed matter 18(2006)613
53. Pang Xiao-feng, Comment on "thermodynamic properties of alpha-helix protein, a soliton approach", Phys. Rev. E49(1994) 4747;
54. the properties of Raman scattering resulting from the soliton excited in protein, Acta Phys. Slovaca. 48(1998) 99;
55. the features of infrared absorption for protein molecules, Chin. J.InfraredMill.Waves12(1993)377;
56. Pang Xiao-feng, influence of the soliton in anharmonoic molecular crystals with temperature on Mossbauer effect, European Phys. J. B 10(1999) 415;
57. Mossbauer effect arising from the soliton motion in the molecular crystals, Acta. Phys. Sinica 42 (1993) 1841;
58. stabilization of the soliton transport bio-energy in protein molecules in the improved model, Commun. Theor. Phys. 41(2004)470;
59. quantum and disorder effects on the soliton transported bio-energy in the improved model in protein molecules, ibid, 43(2005)104;
60. the characteristics of soliton solution to the improved model of bio-energy transfer,Chin.J.Atom.Mol.Phys.18(2001)278;
61. Pang Xiao-feng, et al, Changes of the Mossbauer effect caused by the excitation of the solitons in the organic molecular crystals at finite temperatures, J. Phys. Chem. Solids, 66 (2005) 963
62. J. C. Eilbeck, P. S.Lomdahl and A. C. Scott,the discrete self-trapping equation, Physica D16(1985) 318;
63. soliton structure in crystalline acetanilide, Phys. Rev. B30(1984)4073.
64. A.C.Scott, Davydov soliton in polypeptides, Phil.Trans. R.Soc.Lond. A315(1985)423;
65. Davydov soliton, Phys. Rep. 217 (1982)1
66. A.C.Scott, J.C.Eilbeck, the quantized discrete self-trapping equation, Phys.Lett.119A(1986) 60;
67. on the CH stretch overtone of benzene, Chem.Phys.Lett. 132 (1986)23.
68. A.C.Scott, D.S.Lomdahl and J.C.Eilbeck, between the local-mode and normal model limits, Chem. Phys. Lett. 113 (1985)29
69. G.Careri, U.Buontempo, F. Galluzzi, A. C. Scott, E. Gratton and E. Shydmsunder, spectroscopic evidence for Davydov-like-solitons in acetanilide, Phys. Rev. B30 (1984)4689
70. Pang Xiao-feng (Pang X.F.), vibrational energy-spectra of water molecule by self-trapping equation, Acta Phys. Sinica 43(1994)1987;
71. quantum vibrational energy-spectra of benzene molecules, Chinese J.Phys. Chem. 12(1995)1062
72. Chen X.R., Gou Q. Q. and Pang X.F., nonlinear vibrational energy-spectra of molecular crystals, Chin. Phys. Lett.13 (1996)660;
73. calculations of stretching vibrational overtones and combinations of arsine by nonlinear model,7(1998)329;
74. a nonlinear model for highly excited vibrational energy levels of silane, Acta Phys. Sinica 8 (1999) 131;
75. high-lying vibrational spectrum of ammonia via nonlinear quantum theory, Commun. Theor. Phys.31(1999) 169;
76. Pang X. F.and Chen X. R., nonlinearly vibrational energy-spectra of molecular crystals, Chinese physics 9 (2000) 108;
77. distribution of vibrational energy levels of protein molecular chains, Commun.Theor.Phys.35 (2001)323;
78. calculation of vibrational energy-spectra of alpha-helical protein molecules and its properties, ibid, 37(2002)715;
79. quantum vibrational energy spectra of molecular chains in crystalline acetanilide, J.Phys.Chem. of Solid, 62(2001)793;
80. vibrational energy-spectra and infrared absorption of alpha-helical protein molecules, Chin. Phys.lett.19(2002)1096;
81. properties of vibrational energy spectra of molecular crystals, Phys. Stat. Sol.(b) 229(2002)1397.
82. M.Daune and W.J.Duftin, molecular biophysics, Oxford, Oxford University Press, 1999
83. R.Weaver, molecular biology, Boston, MC.Graw Hill, 2000