Nucleotide sequence analysis of VP7 gene of Indian isolates of bluetongue virus vis-à-vis other serotypes from different parts of the world

DNA Sequence - Journal of DNA Sequencing and Mapping

Volumn 17, Issue 3, 2006, Pages 187-198

  Kovi, Ramesh C ^a   Dahiya, Swati ^a   Prasad, G ^a   Minakshi, ^a  

^a CCS HARYANA AGRICULTURAL UNIVERSITY   (India)

Author keywords

Bluetongue virus; Nucleotide sequence analysis; Orbivirus; VP7 gene

Indexed keywords

ENZYME; PLASMID VECTOR;

ARTICLE; BACTERIAL CELL; BLUETONGUE ORBIVIRUS; CELL CULTURE; ESCHERICHIA COLI; GENBANK; GENE; GENE SEQUENCE; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RESTRICTION MAPPING; SCREENING; SEROTYPE; VP7 GENE;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; BLUETONGUE; BLUETONGUE VIRUS; GENES, VIRAL; MOLECULAR SEQUENCE DATA; PHYLOGENY; RESTRICTION MAPPING; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY; SHEEP; VIRAL CORE PROTEINS;

BLUETONGUE VIRUS; MICROMESISTIUS POUTASSOU; MIRIDAE; ORBIVIRUS; REOVIRIDAE;

EID: 33847230941     PISSN: 10425179     EISSN: 10292365     Source Type: Journal    
DOI: 10.1080/10425170600807264     Document Type: Article

References (26)

1. Bonneau KR, Zhang NZ, Wilson WC, Zhu JB, Zhang FQ, Li ZH, Zhang KL, Xiao L, Xiang WB, MacLachlan NJ. 2000. Phylogenetic analysis of the S7 gene does not segregate Chinese strains of bluetongue virus into a single topotype. Arch Virol 145:1163-1171.
2. Chomoczynski P, Sacchi N. 1987. Single step method of RNA isolation by acid guanidinium thiocyanate - phenol - chloroform extraction. Anal Biochem 162:156-159.
3. Dahiya S, Prasad G, Minakshi, Kovi RC. 2004. VP2 gene based phylogenetic relationship of Indian isolates of bluetongue virus serotype 1 and other serotypes from different parts of the world. DNA Seq 15:351-361.
4. Dahiya S, Prasad G, Minakshi, Kovi RC. 2005. Typing of bluetongue virus serotype 1 and 23 by RT-PCR. Indian J Biotechnol 4:373-377.
5. Dangler CA, de Mattos EA, de Mattos CC, Osburn BI. 1990. Identifying bluetongue virus ribonucleic acid sequences by the polymerase chain reaction. J Virol Methods 28:281-292.
6. Gibbs EP, Greiner EC. 1994. The epidemiology of bluetongue. Comp Immunol Microbiol Infect Dis 17:207-220.
7. Gould AR. 1987. The complete nucleotide sequence of bluetongue virus serotype 1 RNA 3 and a comparison with other geographic serotypes from Australia, South Africa and United States of America and with other Orbivirus isolates. Virus Res 7:169-183.
8. Huismans H. 1979. Protein synthesis in bluetongue virus infected cells. Virology 92:385-396.
9. Hwang GY, Chiou JF, Yang YY, Li JKK. 1993. High sequence conservation among the United States bluetongue virus cognate M2 genes which encodes the non structural NS1 tubule protein. Virology 192:321-327.
10. Jain NC, Sharma R, Prasad G. 1986. Isolation of bluetongue virus from sheep in India. Vet Rec 119:17-18.
11. Kowalik FT, Li KJ. 1991. Bluetongue virus evolution; sequence analysis of the genomic S1 segments and major core protein VP7. Virology 181:749-755.
12. MacLachlan NJ. 1994. The pathogenesis and immunology of bluetongue virus infection of ruminants. Comp Immunol Microbiol Infect Dis 17:97-206.
13. MacLachlan NJ, Osburn BI, Stott JL. 1989. Is bluetongue virus infection of cattle a truly persistent viral infection? Proc US Anim Health Assoc 94:89-98.
14. Mertens PPC, Bamford DH. 2001. The RNAs and proteins of dsRNA viruses, Accession numbers for currently available RNA sequences of bluetongue virus (BTV) serotypes 1-24. Website: http://www.iah.bbsrc.ac.uk/dsRNA virus proteins/
15. Mertens PPC, Brown F, Sanger DV. 1984. Assignment of the genome segments of bluetongue virus type 1 to the proteins which they encode. Virology 135:207-217.
16. OIE. 2000. Manual of standards for diagnostic tests and vaccines: List A and B diseases of mammals, birds and bees. 4th ed. Paris: OIE. p 957.
17. Oldfield S, Adachi A, Urakawa T, Hirasawa T, Roy P. 1990. Purification and characterization of the major group specific core antigen VP7 of bluetongue virus synthesized by a recombinant baculovirus. J Gen Virol 71:2649-2656.
18. Osburn BI. 1994. The impact of bluetongue virus on reproduction. Comp Immunol Microbiol Infect Dis 17:189-196.
19. Prasad G. 2000. Wither bluetongue research in India. Indian J Microbiol 40:163-175.
20. Reed LI, Muench H. 1938. A simple method of estimating fifty per cent end points. Am J Hyg 27:493.
21. Roy P, Goorman M. 1990. Bluetongue virus. Curr Top Microbiol Immunol 162:1-200.
22. Sambrook J, Russell DW. 2001. Plasmids and their usefulness in molecular cloning: A laboratory manual. 3rd ed., New York: Cold Spring Harbor Laboratory Press. p 1.1-1.34.
23. Tatiana AT, Thomas LM. 1999. Blast 2 sequences - a new tool for comparing protein and nucleotide sequences. FEMS Microbiol Lett 174:247-250, website: http://www. ncbi.nlm.nih.gov/-blast/bl2seq/bl2.html.
24. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876-4882.
25. Tiwari AK, Kataria RS, Desai G, Butchaiah G, Bandyopadhyay SK. 2000. Characterization of an Indian bluetongue virus isolate by RT-PCR and restriction enzyme analysis of the VP7 gene sequence. Vet Res Commun 24:401-409.
26. Wang L, Kattenbelt AJ, Gould RA, Pritchard IL, Crameri SG, Eaton TB. 1994. Major core protein VP7 of Australian bluetongue virus serotype 15; sequence and antigenicity divergence from other BTV serotypes. J Gen Virol 75:2421-2425.