Characterization of a novel Toll/interleukin-1 receptor (TIR)-TIR gene differentially expressed in common bean (Phaseolus vulgaris cv. Othello) undergoing a defence response to the geminivirus Bean dwarf mosaic virus

Molecular Plant Pathology

Volumn 8, Issue 2, 2007, Pages 151-162

  Seo, Young Su ^a   Jeon, Jong Seong ^a,b   Rojas, Maria R ^a   Gilbertson, Robert L ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b Kyung Hee University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

BEAN DWARF MOSAIC VIRUS; BEAN YELLOW MOSAIC VIRUS; BEGOMOVIRUS; DNA VIRUSES; GEMINIVIRIDAE; NICOTIANA BENTHAMIANA; PHASEOLUS VULGARIS; POTYVIRUS;

EID: 33847218308     PISSN: 14646722     EISSN: 13643703     Source Type: Journal    
DOI: 10.1111/j.1364-3703.2007.00379.x     Document Type: Article

References (44)

1. Ayliffe, M.A., Frost, D.V., Finnegan, E.J., Lawrence, G.J., Anderson, P.A. and Ellis, J.G. (1999) Analysis of alternative transcripts of the flax L6 rust resistance gene. Plant J. 23, 287-292.
2. Ayliffe, M.A., Steinau, M., Park, R.F., Rooke, L., Pacheco, M.G., Hulbert, S.H., Trick, H.N. and Pryor, A.J. (2004) Aberrant mRNA processing of the maize Rp1-D rust resistance gene in wheat and barley. Mol. Plant-Microbe Interact. 17, 853-864.
3. Century, K.S., Shapiro, A.D., Repetti, P.P., Dahlbeck, D., Holub, A. and Staskawicz, B. (1997) NDR1, a pathogen-induced component required for Arabidopsis disease resistance. Science, 278, 1963-1965.
4. Dangl, J.L. and Jones, J.D.G. (2001) Plant pathogens and integrated defense responses to infection. Nature, 411, 826-833.
5. Diatchenko, L., Lau, Y.K., Campbell, A.P., Chenchik, A., Moqadam, F., Huang, B., Lukyanov, S., Lukyanov, K., Gurskaya, N., Sverdlov, E.D. and Siebert, P.D. (1996) Suppression subtractive hybridization: a method for generating differentially regulated or tissue-specific cDNA probes and libraries. Proc. Natl Acad. Sci. USA, 93, 6025-6030.
6. Dinesh-Kumar, S.P. and Baker, B. (2000) Alternatively spliced N resistance gene transcripts: their possible role in tobacco mosaic virus resistance. Proc. Natl Acad. Sci. USA, 97, 1908-1913.
7. Durrant, W.E., Rowland, O., Piedras, P., Hammond-Kosack, K.E. and Jones, J.D.G. (2000) cDNA-AFLP reveals a striking overlap in racespecific resistance and wound response gene expression profiles. Plant Cell, 12, 963-977.
8. Falk, A., Feys, B.J., Frost, L.N., Jones, J.D.G., Daniels, M.J. and Parker, J.E. (1999) EDS1, an essential component of R gene-mediated disease resistance in Arabidopsis, has homology to eukaryotic lipase. Proc. Natl Acad. Sci. USA, 96, 3292-3297.
9. Gafni, Y. and Epel, B. (2002) The role of host and viral proteins in intraand inter-cellular trafficking of geminiviruses. Physiol. Mol. Plant Pathol. 60, 231-241.
10. Garrido-Ramirez, E.R., Sudarshana, M.R., Lucas, W.J. and Gilbertson, R.L. (2000) Bean dwarf mosaic virus BV1 protein is a determinant of the hypersensitive response and avirulence in Phaseolus vulgaris. Mol. Plant- Microbe Interact. 13, 1184-1194.
11. Gilbertson, R.L., Hidayat, S.H., Martinez, R.T., Leong, S.A., Morales, F.J. and Maxwell, D.P. (1991) Differentiation of bean-infecting geminiviruses by nucleic acid hybridization probes and aspects of bean golden mosaic virus in Brazil. Plant Dis. 75, 336-342.
12. Gilchrist, D.G. (1998) Programmed cell death in plant disease: the purpose and promise of cellular suicide. Annu. Rev. Phytopathol. 36, 393-414.
13. Glazebrook, J., Rogers, E.E. and Ausubel, F.M. (1997) Use of Arabidopsis for genetic dissection of plant defense responses. Annu. Rev. Genet. 31, 547-569.
14. Hammond-Kosack, K.E. and Jones, J.D.G. (1996) Resistance genedependent plant defense responses. Plant Cell, 8, 1773-1791.
15. Hanley-Bowdoin, L., Settlage, S., Orozco, B.M., Nagar, S. and Robertson, D. (1999) Geminiviruses: models for plant DNA replication, transcription, and cell cycle regulation. Crit. Rev. Plant Sci. 18, 71-106.
16. Hara, E., Kato, T., Kakada, S., Sekiya, S. and Oda, K. (1991) Subtractive cDNA cloning using oligo-dT-30-latex and PCR: isolation of cDNA clones specific to undifferentiated human embryonal carcinoma cells. Nucleic Acids Res. 19, 7097-7104.
17. Hou, Y.-M., Paplomatas, E.J. and Gilbertson, R.L. (1998) Host adaptation and replication properties of two bipartite geminiviruses and their pseudorecombinants. Mol. Plant-Microbe Interact. 11, 208-217.
18. Jefferson, R.A., Kavanagh, T.A. and Bevan, M.V. (1987) GUS fusions: β- glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J. 6, 3901-3907.
19. Kimmerer, T.W. and Kozlowski, T.T. (1982) Ethylene, ethane, acetaldehyde, and ethanol production by plants under stress. Plant Physiol. 69, 840-847.
20. Kopp, E.B. and Medzhitov, R. (1999) The Toll-receptor family and control of innate immunity. Curr. Opin. Immunol. 11, 13-18.
21. Liang, P. and Pardee, A.B. (1992) Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction. Science, 257, 967-971.
22. van Loon, L.C. and van Strien, E.A. (1999) The families of pathogenesis-related proteins, their activities, and comparative analysis of PR1 type proteins. Physiol. Mol. Plant Pathol. 55, 85-97.
23. Maleck, A., Levine, A., Eulgem, T., Morgan, A., Schmid, J., Lawton, K.A., Dangl, J.L. and Dietrich, R.A. (2000) The transcriptome of Arabidopsis thaliana during systemic acquired resistance. Nat. Genet. 26, 403-410.
24. Martin, G.B., Bogdanove, A.J. and Sessa, G. (2003) Understanding the functions of plant disease resistance proteins. Annu. Rev. Plant Biol. 54, 23-61.
25. McCarty, D.R. (1985) A simple method for extraction of RNA from maize tissues. Maize Gen. Coop. Lett. 60, 61.
26. Morales, F., Niessen, A., Ramirez, B. and Castano, M. (1990) Isolation and partial characterization of a geminivirus causing bean dwarf mosaic. Phytopathology, 80, 96-101.
27. Rathjen, J.P., Chang, J.H., Staskawicz, B.J. and Michelmore, R.W. (1999) Constitutively active Pto induces a Prf-dependent hypersensitive response in the absence of avrPto. EMBO J. 18, 3232-3240.
28. Rojas, M.R., Gilbertson, R.L., Russell, D.R. and Maxwell, D.P. (1993) Use of degenerate primers in the polymerase chain reaction to detect whitefly-transmitted geminiviruses. Plant Dis. 77, 340-347.
29. Rojas, M.R., Hagen, C., Lucas, W.J. and Gilbertson, R.L. (2005) Exploiting chinks in the plant's armor: evolution and emergence of geminiviruses. Annu. Rev. Phytopathol. 43, 361-394.
30. Ros, B., Thümmler, F. and Wenzel, G. (2004) Analysis of differentially expressed genes in a susceptible and moderately resistant potato cultivar upon Phytophthora infestans infection. Mol. Plant Pathol. 5, 191-201.
31. Seehaus, K. and Tenhaken, R. (1998) Cloning of genes by mRNA differential display induced during the hypersensitive reaction of soybean after inoculation with Pseudomonas syringae pv. glycinea. Plant Mol. Biol. 38, 1225-1234.
32. Seo, Y.-S., Gepts, P. and Gilbertson, R.L. (2004) Genetics of resistance to the geminivirus, Bean dwarf mosaic virus, and the role of the hypersensitive response in common bean. Theor. Appl. Genet. 108, 786-793.
33. Seo, Y.-S., Rojas, M.R., Lee, J.-Y., Lee, S.-W., Jeon, J.-S., Ronald, P., Lucas, W.J. and Gilbertson, R.L. (2006a) A viral resistance gene from common bean functions across plant families and is upregulated in a nonvirus- specific manner. Proc. Natl Acad. Sci. USA, 103, 11856-11861.
34. Seo, Y.-S., Zhou, Y.-C., Turini, T.A., Cook, C.G., Gilbertson, R.L. and Natwick, E.T. (2006b) Evaluation of cotton germ plasm for resistance to the whitefly and cotton leaf crumple (CLCr) disease and etiology of CLCr in California's Imperial Valley. Plant Dis. 90, 877-884.
35. Shin, R., Lee, G.-J., Park, C.-J., Kim, T.-Y., You, J.-S., Nam, Y.-W. and Paek, K.H. (2001) Isolation of pepper mRNAs differentially expressed during the hypersensitive response to Tobacco mosaic virus and characterization of a proteinase inhibitor gene. Plant Sci. 161, 727-737.
36. Sudarshana, M.R., Wang, H.L., Lucas, W.J. and Gilbertson, R.L. (1998) Dynamics of bean dwarf mosaic geminivirus cell-to-cell and long-distance movement in Phaseolus vulgaris revealed using green fluorescent protein. Mol. Plant-Microbe Interact. 11, 277-291.
37. Tai, T.H., Dahlbeck, D., Clark, E.T., Gajiwala, P., Pasion, R., Whalen, M.C., Stall, R.E. and Staskawicz, B.J. (1999) Expression of the Bs2 pepper gene confers resistance to bacterial spot disease in tomato. Proc. Natl Acad. Sci. USA, 96, 14153-14158.
38. Vallejos, C.E., Astua-Monge, G., Jones, V., Plyler, T.R., Sakiyama, N.S. and Mackenzie, S.A. (2006) Genetic and molecular characterization of the I locus of Phaseolus vulgaris. Genetics, 172, 1229-1242.
39. Wang, H.L., Sudarshana, M.R., Gilbertson, R.L. and Lucas, W.J. (1999a) Analysis of cell-to-cell and long-distance movement of a bean dwarf mosaic geminivirus-green fluorescent protein reporter in host and nonhost species: Identification of sites of resistance. Mol. Plant-Microbe Interact. 12, 345-355.
40. Wang, Z.-X., Yano, M., Yamanouchi, U., Iwamoto, M., Monna, L., Hayasaka, H., Katayose, Y. and Sasaki, T. (1999b) The Pib gene for rice blast resistance belongs to the nucleotide binding and leucine-rich repeat class of plant disease resistance genes. Plant J. 19, 55-64.
41. Whitham, S., Dinesh-Kumer, S.P., Choi, D., Hehl, R., Corr, C. and Baker, B. (1994) The product of the tobacco mosaic virus resistance gene N: similarity to Toll and the interleukin-1 receptor. Cell, 78, 1101-1115.
42. Yoshimura, S., Yamanouchi, U., Katayose, Y., Toki, S., Wang, Z.-W., Kono, I., Iwata, N. and Sasaki, T. (1998) Expression of Xa1, a bacterial blight-resistance gene in rice, is induced by bacterial inoculation. Proc. Natl Acad. Sci. USA, 95, 1663-1668.
43. Zhang, S. and Gassmann, W. (2003) RPS4-mediated disease resistance requires the combined presence of RPS4 transcripts with full-length and truncated open reading frames. Plant Cell, 15, 2333-2342.
44. Zipfel, C., Robatzek, S., Navarro, L., Oakeley, E.J., Jones, J.D.G., Felix, G. and Boller, T. (2004) Bacterial disease resistance in Arabidopsis through flagellin perception. Nature, 428, 764-767.