Cryptic plasmids isolated from Campylobacter strains represent multiple, novel incompatibility groups

Plasmid

Volumn 57, Issue 2, 2007, Pages 108-117

  Miller, William G ^a   Heath, Sekou ^a   Mandrell, Robert E ^a  

^a WESTERN REGIONAL RESEARCH CENTER   (United States)

Author keywords

Campylobacter; Copy number; Incompatibility; Iteron; Plasmids; Rolling circle

Indexed keywords

ARTICLE; BACTERIAL STRAIN; CAMPYLOBACTER; CAMPYLOBACTER COLI; CAMPYLOBACTER HYOINTESTINALIS; CAMPYLOBACTER JEJUNI; CONTROLLED STUDY; FIRMICUTES; GENE ISOLATION; GENE REPLICATION; GENE SEQUENCE; GENETIC INCOMPATIBILITY; GENETIC TRAIT; GENETIC TRANSFORMATION; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PLASMID; RESTRICTION SITE; SEQUENCE ANALYSIS; SHUTTLE VECTOR;

BACTERIAL PROTEINS; BASE COMPOSITION; BASE SEQUENCE; CAMPYLOBACTER; CAMPYLOBACTER COLI; CAMPYLOBACTER HYOINTESTINALIS; CAMPYLOBACTER JEJUNI; CAMPYLOBACTER LARI; DRUG RESISTANCE, MICROBIAL; GENE DOSAGE; GENES, BACTERIAL; MOLECULAR SEQUENCE DATA; PHYLOGENY; PLASMIDS; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID;

CAMPYLOBACTER; CAMPYLOBACTER COLI; CAMPYLOBACTER HYOINTESTINALIS; CAMPYLOBACTER JEJUNI; CAMPYLOBACTER LARI; FIRMICUTES;

EID: 33847198591     PISSN: 0147619X     EISSN: 10959890     Source Type: Journal    
DOI: 10.1016/j.plasmid.2006.08.005     Document Type: Article

References (32)

1. Alfredson D.A., and Korolik V. Sequence analysis of a cryptic plasmid pCJ419 from Campylobacter jejuni and construction of an Escherichia coli-Campylobacter shuttle vector. Plasmid 50 (2003) 152-160
2. Chattoraj D.K. Control of plasmid DNA replication by iterons: no longer paradoxical. Mol. Microbiol. 37 (2000) 467-476
3. De Ungria M.C., Kolesnikow T., Cox P.T., and Lee A. Molecular characterization and interstrain variability of pHPS1, a plasmid isolated from the Sydney strain (SS1) of Helicobacter pylori. Plasmid 41 (1999) 97-109
4. Fouts D.E., Mongodin E.F., Mandrell R.E., Miller W.G., Rasko D.A., Ravel J., Brinkac L.M., Deboy R.T., Parker C.T., Daugherty S.C., Dodson R.J., Durkin A.S., Madupu R., Sullivan S.A., Shetty J.U., Ayodeji M.A., Shvartsbeyn A., Schatz M.C., Badger J.H., Fraser C.M., and Nelson K.E. Major structural differences and novel potential virulence mechanisms from the genomes of multiple Campylobacter species. PLoS Biol. 3 (2005) e15
5. Guerry P., Alm R.A., Power M.E., Logan S.M., and Trust T.J. Role of two flagellin genes in Campylobacter motility. J. Bacteriol. 173 (1991) 4757-4764
6. Guerry P., Yao R., Alm R.A., Burr D.H., and Trust T.J. Systems of experimental genetics for Campylobacter species. Methods Enzymol. 235 (1994) 474-481
7. Hefford M.A., Kobayashi Y., Allard S.E., Forster R.J., and Teather R.M. Sequence analysis and characterization of pOM1, a small cryptic plasmid from Butyrivibrio fibrisolvens, and its use in construction of a new family of cloning vectors for Butyrivibrios. Appl. Environ. Microbiol. 63 (1997) 1701-1711
8. Helinski D.R., Toukdarian A.E., and Novick R.P. Replication control and other stable maintenance mechanisms of plasmids. In: Neidhardt F.C., Curtiss R.I., Ingraham J.L., Lin E.C.C., Low K.B., and Magasanik B. (Eds). Escherichia coli and Salmonella: Cellular and molecular biology. second ed. (1996), American Society for Microbiology, Washington, DC 2295-2324
9. Hofreuter D., and Haas R. Characterization of two cryptic Helicobacter pylori plasmids: a putative source for horizontal gene transfer and gene shuffling. J. Bacteriol. 184 (2002) 2755-2766
10. Jesse T.W., Pittenger-Alley L.G., and Englen M.D. Sequence analysis of two cryptic plasmids from an agricultural isolate of Campylobacter coli. Plasmid 55 (2006) 64-69
11. Khan S.A., and Novick R.P. Structural analysis of plasmid pSN2 in Staphylococcus aureus: no involvement in enterotoxin B production. J. Bacteriol. 149 (1982) 642-649
12. Kleanthous H., Clayton C.L., and Tabaqchali S. Characterization of a plasmid from Helicobacter pylori encoding a replication protein common to plasmids in Gram-positive bacteria. Mol. Microbiol. 5 (1991) 2377-2389
13. Kumar S., Tamura K., Jakobsen I.B., and Nei M. MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17 (2001) 1244-1245
14. Labigne-Roussel A., Harel J., and Tompkins L. Gene transfer from Escherichia coli to Campylobacter species: development of shuttle vectors for genetic analysis of Campylobacter jejuni. J. Bacteriol. 169 (1987) 5320-5323
15. Lawley T., Wilkins B.M., and Frost L.S. Bacterial conjugation in Gram-negative bacteria. In: Funnell B.E., and Phillips G.J. (Eds). Plasmid Biol. (2004), ASM Press, Washington, DC 203-226
16. - Δ Δ CT Method. Methods 25 (2001) 402-408
17. Luo N., and Zhang Q. Molecular characterization of a cryptic plasmid from Campylobacter jejuni. Plasmid 45 (2001) 127-133
18. Miller W.G., and Simons R.W. Chromosomal supercoiling in Escherichia coli. Mol. Microbiol. 10 (1993) 675-684
19. Miller W.G., Bates A.H., Horn S.T., Brandl M.T., Wachtel M.R., and Mandrell R.E. Detection on surfaces and in Caco-2 cells of Campylobacter jejuni cells transformed with new gfp, yfp, and cfp marker plasmids. Appl. Environ. Microbiol. 66 (2000) 5426-5436
20. Miller W.G., Pearson B.M., Wells J.M., Parker C.T., Kapitonov V.V., and Mandrell R.E. Diversity within the Campylobacter jejuni type I restriction-modification loci. Microbiology 151 (2005) 337-351
21. Minnis J.A., Taylor T.E., Knesek J.E., Peterson W.L., and McIntire S.A. Characterization of a 3.5-kbp plasmid from Helicobacter pylori. Plasmid 34 (1995) 22-36
22. Nakamura M., Nagamine T., Ogata K., Tajima K., Aminov R.I., and Benno Y. Sequence analysis of small cryptic plasmids isolated from Selenomonas ruminantium S20. Curr. Microbiol. 38 (1999) 107-112
23. Pavitt G.D., and Higgins C.F. Chromosomal domains of supercoiling in Salmonella typhimurium. Mol. Microbiol. 10 (1993) 685-696
24. Rasmussen R. Quantification on the LightCycler. In: Meuer S., Wittwer C., and Nakagawara K. (Eds). Rapid Cycle Real-time PCR. Methods and Applications (2001), Springer-Verlag, Heidelberg, Germany 21-34
25. Song J.Y., Choi S.H., Byun E.Y., Lee S.G., Park Y.H., Park S.G., Lee S.K., Kim K.M., Park J.U., Kang H.L., Baik S.C., Lee W.K., Cho M.J., Youn H.S., Ko G.H., Bae D.W., and Rhee K.H. Characterization of a small cryptic plasmid, pHP51, from a Korean isolate of strain 51 of Helicobacter pylori. Plasmid 50 (2003) 145-151
26. Sousa C., de Lorenzo V., and Cebolla A. Modulation of gene expression through chromosomal positioning in Escherichia coli. Microbiology 143 (1997) 2071-2078
27. Trieber C.A., and Taylor D.E. Mechanisms of antibiotic resistance in Campylobacter. In: Nachamkin I., and Blaser M.J. (Eds). Campylobacter. 2nd ed. (2000), American Society for Microbiology, Washington, D.C 441-454
28. Wang Y., and Taylor D.E. Chloramphenicol resistance in Campylobacter coli: nucleotide sequence, expression, and cloning vector construction. Gene 94 (1990) 23-28
29. Wang Y., and Taylor D.E. Natural transformation in Campylobacter species. J. Bacteriol. 172 (1990) 949-955
30. Waterman S.R., Hackett J., and Manning P.A. Characterization of the replication region of the small cryptic plasmid of Campylobacter hyointestinalis. Gene 125 (1993) 11-17
31. Wosten M.M., Boeve M., Koot M.G., van Nuene A.C., and van der Zeijst B.A. Identification of Campylobacter jejuni promoter sequences. J. Bacteriol. 180 (1998) 594-599
32. Yao R., Alm R.A., Trust T.J., and Guerry P. Construction of new Campylobacter cloning vectors and a new mutational cat cassette. Gene. 130 (1993) 127-130