-
1
-
-
0033552961
-
Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori
-
Alm R.A., Ling L.S.L., Moir D.T., King B.L., Brown E.D., Doig P.C., Smith D.R., Noonan B., Guild B.C., deJonge B.L., Carmel G., Tummino P.J., Caruso A., Uria-Nickelsen M., Mills D.M., Ives C., Gibson R., Merberg D., Mills S.D., Jiang Q., Taylor D.E., Vovis G.F., Trust T.J. Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori. Nature. 397:1999;176-180.
-
(1999)
Nature
, vol.397
, pp. 176-180
-
-
Alm, R.A.1
Ling, L.S.L.2
Moir, D.T.3
King, B.L.4
Brown, E.D.5
Doig, P.C.6
Smith, D.R.7
Noonan, B.8
Guild, B.C.9
DeJonge, B.L.10
Carmel, G.11
Tummino, P.J.12
Caruso, A.13
Uria-Nickelsen, M.14
Mills, D.M.15
Ives, C.16
Gibson, R.17
Merberg, D.18
Mills, S.D.19
Jiang, Q.20
Taylor, D.E.21
Vovis, G.F.22
Trust, T.J.23
more..
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul S.F., Madden T.L., Schaffer A.A., Zhang J., Zhang Z., Miller W., Lipman D.J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:1997;3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
0033868538
-
Control of plasmid DNA replication by iterons: No longer paradoxical
-
Chattoraj D.K. Control of plasmid DNA replication by iterons: no longer paradoxical. Mol. Microbiol. 37:2000;467-476.
-
(2000)
Mol. Microbiol.
, vol.37
, pp. 467-476
-
-
Chattoraj, D.K.1
-
4
-
-
85031076361
-
Construction of a shuttle vector of Helicobacter pylori and Escherichia coli
-
Cho M.J., Lee W.K., Lee S.Y., Kim K.H., An Y.S., Kim S.H., Kim H.J., Ryu B.D., Choi Y.J., Yoon Y.H., Paik S.C., Jeon Y.S., Rhee K.H. Construction of a shuttle vector of Helicobacter pylori and Escherichia coli. J. Kor. Soc. Microbiol. 31:1996;557-564.
-
(1996)
J. Kor. Soc. Microbiol.
, vol.31
, pp. 557-564
-
-
Cho, M.J.1
Lee, W.K.2
Lee, S.Y.3
Kim, K.H.4
An, Y.S.5
Kim, S.H.6
Kim, H.J.7
Ryu, B.D.8
Choi, Y.J.9
Yoon, Y.H.10
Paik, S.C.11
Jeon, Y.S.12
Rhee, K.H.13
-
5
-
-
0032252623
-
A novel method of extracting plasmid DNA from Helicobacter species
-
de Ungria M.C., Tillett D., Neilan B.A., Cox P.T., Lee A. A novel method of extracting plasmid DNA from Helicobacter species. Helicobacter. 3:1998;269-277.
-
(1998)
Helicobacter
, vol.3
, pp. 269-277
-
-
De Ungria, M.C.1
Tillett, D.2
Neilan, B.A.3
Cox, P.T.4
Lee, A.5
-
6
-
-
0032907933
-
Molecular characterization and interstrain variability of pHPS1, a plasmid isolated from the Sydney strain (SS1) of Helicobacter pylori
-
de Ungria M.C., Kolesnikow T., Cox P.T., Lee A. Molecular characterization and interstrain variability of pHPS1, a plasmid isolated from the Sydney strain (SS1) of Helicobacter pylori. Plasmid. 41:1999;97-109.
-
(1999)
Plasmid
, vol.41
, pp. 97-109
-
-
De Ungria, M.C.1
Kolesnikow, T.2
Cox, P.T.3
Lee, A.4
-
7
-
-
0031811125
-
Replication and control of circular bacterial plasmids
-
del Solar G., Giraldo R., Ruiz-Echevarria M.J., Espinosa M., Diaz-Orejas R. Replication and control of circular bacterial plasmids. Microbiol. Mol. Biol. Rev. 62:1998;434-464.
-
(1998)
Microbiol. Mol. Biol. Rev.
, vol.62
, pp. 434-464
-
-
Del Solar, G.1
Giraldo, R.2
Ruiz-Echevarria, M.J.3
Espinosa, M.4
Diaz-Orejas, R.5
-
8
-
-
0029941581
-
Sequence of plasmid pGT5 from the Archaeon Pyrococcus abyssi: Evidence for rolling-circle replication in a hyperthermophilic
-
Erauso G., Marsin S., Benbouzid-Rollet N., Baucher M.F., Barbeyron T., Zivanovic Y., Prieur D., Forterre P. Sequence of plasmid pGT5 from the Archaeon Pyrococcus abyssi: evidence for rolling-circle replication in a hyperthermophilic. J. Bacteriol. 178:1996;3232-3237.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 3232-3237
-
-
Erauso, G.1
Marsin, S.2
Benbouzid-Rollet, N.3
Baucher, M.F.4
Barbeyron, T.5
Zivanovic, Y.6
Prieur, D.7
Forterre, P.8
-
9
-
-
0028879978
-
Genetic organization of a small cryptic plasmid of Helicobacter pylori
-
Heuermann D., Haas R. Genetic organization of a small cryptic plasmid of Helicobacter pylori. Gene. 165:1995;17-24.
-
(1995)
Gene
, vol.165
, pp. 17-24
-
-
Heuermann, D.1
Haas, R.2
-
10
-
-
0036236199
-
Characterization of two cryptic Helicobacter pylori plasmids: A putative source for horizontal gene transfer and gene shuffling
-
Hofreuter D., Haas R. Characterization of two cryptic Helicobacter pylori plasmids: a putative source for horizontal gene transfer and gene shuffling. J. Bacteriol. 184:2002;2755-2766.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 2755-2766
-
-
Hofreuter, D.1
Haas, R.2
-
11
-
-
0036557988
-
Characterization of pKU701, a 2.5-kb plasmid, in a Japanese Helicobacter pylori isolate
-
Hosaka Y., Okamoto R., Irinoda K., Kaieda S., Koizumi W., Saigenji K., Inoue M. Characterization of pKU701, a 2.5-kb plasmid, in a Japanese Helicobacter pylori isolate. Plasmid. 47:2002;193-200.
-
(2002)
Plasmid
, vol.47
, pp. 193-200
-
-
Hosaka, Y.1
Okamoto, R.2
Irinoda, K.3
Kaieda, S.4
Koizumi, W.5
Saigenji, K.6
Inoue, M.7
-
12
-
-
0026056409
-
Characterization of a plasmid from Helicobacter pylori encoding a replication protein common to plasmids in Gram-positive bacteria
-
Kleanthous H., Clayton C.L., Tabaqchali S. Characterization of a plasmid from Helicobacter pylori encoding a replication protein common to plasmids in Gram-positive bacteria. Mol. Microbiol. 5:1991;2377-2389.
-
(1991)
Mol. Microbiol.
, vol.5
, pp. 2377-2389
-
-
Kleanthous, H.1
Clayton, C.L.2
Tabaqchali, S.3
-
13
-
-
0025861991
-
Functional analysis of the fic gene involved in regulation of cell division
-
Komano T., Utsumi R., Kawamukai M. Functional analysis of the fic gene involved in regulation of cell division. Res. Microbiol. 142:1991;269-277.
-
(1991)
Res. Microbiol.
, vol.142
, pp. 269-277
-
-
Komano, T.1
Utsumi, R.2
Kawamukai, M.3
-
14
-
-
0030832902
-
Construction of a Helicobacter pylori-Escherichia coli shuttle vector for gene transfer in Helicobacter pylori
-
Lee W.K., An Y.S., Kim K.H., Kim S.H., Song J.Y., Ryu B.D., Choi Y.J., Yoon Y.H., Baik S.C., Rhee K.H., Cho M.J. Construction of a Helicobacter pylori-Escherichia coli shuttle vector for gene transfer in Helicobacter pylori. Appl. Environ. Microbiol. 63:1997;4866-4871.
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 4866-4871
-
-
Lee, W.K.1
An, Y.S.2
Kim, K.H.3
Kim, S.H.4
Song, J.Y.5
Ryu, B.D.6
Choi, Y.J.7
Yoon, Y.H.8
Baik, S.C.9
Rhee, K.H.10
Cho, M.J.11
-
15
-
-
0029117273
-
Characterization of a 3.5-kbp plasmid from Helicobacter pylori
-
Minnis J.A., Taylor T.E., Knesek J.E., Peterson W.L., McIntire S.A. Characterization of a 3.5-kbp plasmid from Helicobacter pylori. Plasmid. 34:1995;22-36.
-
(1995)
Plasmid
, vol.34
, pp. 22-36
-
-
Minnis, J.A.1
Taylor, T.E.2
Knesek, J.E.3
Peterson, W.L.4
McIntire, S.A.5
-
16
-
-
84920247287
-
Unidentified curved bacilli on gastric epithelium in active chronic gastritis
-
Marshall B., Warren J.R. Unidentified curved bacilli on gastric epithelium in active chronic gastritis. Lancet. 4:1983;1273-1275.
-
(1983)
Lancet
, vol.4
, pp. 1273-1275
-
-
Marshall, B.1
Warren, J.R.2
-
17
-
-
0034691183
-
Replication-induced transcription of an autorepressed gene: The replication initiator gene of plasmid P1
-
Mukhopadhyay S., Chattoraj D.K. Replication-induced transcription of an autorepressed gene: the replication initiator gene of plasmid P1. Proc. Natl. Acad. Sci. USA. 97:2000;7142-7147.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 7142-7147
-
-
Mukhopadhyay, S.1
Chattoraj, D.K.2
-
18
-
-
0028064779
-
Negative control of plasmid DNA replication by iterons. Correlation with initiator binding affinity
-
Papp P.P., Mukhopadhyay G., Chattoraj D.K. Negative control of plasmid DNA replication by iterons. Correlation with initiator binding affinity. J. Biol. Chem. 269:1994;23563-23568.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 23563-23568
-
-
Papp, P.P.1
Mukhopadhyay, G.2
Chattoraj, D.K.3
-
19
-
-
0037126609
-
Origin pairing ('handcuffing') as a mode of negative control of P1 plasmid copy number
-
Park K., Han E., Paulsson J., Chattoraj D.K. Origin pairing ('handcuffing') as a mode of negative control of P1 plasmid copy number. EMBO J. 20:2001;7323-7332.
-
(2001)
EMBO J.
, vol.20
, pp. 7323-7332
-
-
Park, K.1
Han, E.2
Paulsson, J.3
Chattoraj, D.K.4
-
20
-
-
0025945933
-
Helicobacter pylori infection and the risk of gastric carcinoma
-
Parsonnet J., Friedman G.D., Vandersteen D.P., Chang Y., Vogelman J.H., Orentreich N., Sibley R.K. Helicobacter pylori infection and the risk of gastric carcinoma. N. Engl. J. Med. 325:1991;1127-1131.
-
(1991)
N. Engl. J. Med.
, vol.325
, pp. 1127-1131
-
-
Parsonnet, J.1
Friedman, G.D.2
Vandersteen, D.P.3
Chang, Y.4
Vogelman, J.H.5
Orentreich, N.6
Sibley, R.K.7
-
21
-
-
0035663551
-
Sequence and gene expression analyses of plasmid pHPM8 from Helicobacter pylori reveal the presence of two operons with putative roles in plasmid replication and antibiotic activity
-
Quinones M., Knesek J.E., McIntire S.A. Sequence and gene expression analyses of plasmid pHPM8 from Helicobacter pylori reveal the presence of two operons with putative roles in plasmid replication and antibiotic activity. Plasmid. 46:2001;223-228.
-
(2001)
Plasmid
, vol.46
, pp. 223-228
-
-
Quinones, M.1
Knesek, J.E.2
McIntire, S.A.3
-
23
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
-
Thompson J.D., Higgins D.G., Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:1994;4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
24
-
-
0030835739
-
The complete genome sequence of the gastric pathogen Helicobacter pylori
-
Tomb J.F., White O., Kerlavage A.R., Clayton R.A., Sutton G.G., Fleischmann R.D., Ketchum K.A., Klenk H.P., Gill S., Dougherty B.A., Nelson K., Quackenbush J., Zhou L., Kirkness E.F., Peterson S., Loftus B., Richardson D., Dodson R., Khalak H.G., Glodek A., McKenney K., Fitzegerald L.M., Lee N., Adams M.D., Hickey E.K., Berg D.E., Gocayne J.D., Utterback T.R., Peterson J.D., Kelley J.M., Karp P.D., Smith H.O., Fraser C.M., Venter J.C. The complete genome sequence of the gastric pathogen Helicobacter pylori. Nature. 388:1997;539-547.
-
(1997)
Nature
, vol.388
, pp. 539-547
-
-
Tomb, J.F.1
White, O.2
Kerlavage, A.R.3
Clayton, R.A.4
Sutton, G.G.5
Fleischmann, R.D.6
Ketchum, K.A.7
Klenk, H.P.8
Gill, S.9
Dougherty, B.A.10
Nelson, K.11
Quackenbush, J.12
Zhou, L.13
Kirkness, E.F.14
Peterson, S.15
Loftus, B.16
Richardson, D.17
Dodson, R.18
Khalak, H.G.19
Glodek, A.20
McKenney, K.21
Fitzegerald, L.M.22
Lee, N.23
Adams, M.D.24
Hickey, E.K.25
Berg, D.E.26
Gocayne, J.D.27
Utterback, T.R.28
Peterson, J.D.29
Kelley, J.M.30
Karp, P.D.31
Smith, H.O.32
Fraser, C.M.33
Venter, J.C.34
more..
-
25
-
-
0020419109
-
Involvement of cyclic AMP and its receptor protein in filamentation of an Escherichia coli fic mutant
-
Utsumi R., Nakamoto Y., Kawamukai M., Himeno M., Komano T. Involvement of cyclic AMP and its receptor protein in filamentation of an Escherichia coli fic mutant. J. Bacteriol. 151:1982;807-812.
-
(1982)
J. Bacteriol.
, vol.151
, pp. 807-812
-
-
Utsumi, R.1
Nakamoto, Y.2
Kawamukai, M.3
Himeno, M.4
Komano, T.5
-
26
-
-
0034052595
-
Nucleotide sequence analysis of the lactococcal EPS plasmid pNZ4000
-
van Kranenburg R., Kleerebezem M., de Vos W.M. Nucleotide sequence analysis of the lactococcal EPS plasmid pNZ4000. Plasmid. 43:2000;130-136.
-
(2000)
Plasmid
, vol.43
, pp. 130-136
-
-
Van Kranenburg, R.1
Kleerebezem, M.2
De Vos, W.M.3
|