메뉴 건너뛰기




Volumn 70, Issue SUPPL. A, 2007, Pages 45-59

Allelic and haplotypic diversity at the major histocompatibility class II within domesticated Australian Atlantic salmon (Salmo salar L.)

Author keywords

Genetic variation; Heterozygosity; MHC; Salmo salar

Indexed keywords

SALMO SALAR; SASA;

EID: 33847055470     PISSN: 00221112     EISSN: 10958649     Source Type: Journal    
DOI: 10.1111/j.1095-8649.2007.01364.x     Document Type: Article
Times cited : (6)

References (39)
  • 1
    • 0033822582 scopus 로고    scopus 로고
    • Screening of DNA polymorphisms in samples of archived scales from New Zealand snapper
    • doi: 10.1006/jfbi.2000.1242
    • Adcock, G. J., Ramirez, J. H. B., Hauser, L., Smith, P. & Carvalho, G. R. (2000). Screening of DNA polymorphisms in samples of archived scales from New Zealand snapper. Journal of Fish Biology 56, 1283-1287. doi: 10.1006/jfbi.2000.1242
    • (2000) Journal of Fish Biology , vol.56 , pp. 1283-1287
    • Adcock, G.J.1    Ramirez, J.H.B.2    Hauser, L.3    Smith, P.4    Carvalho, G.R.5
  • 3
    • 0036381627 scopus 로고    scopus 로고
    • Resistance to three pathogens in the endangered winter-run chinook salmon (Oncorhynchus tshawytscha): Effects of inbreeding and major histocompatibility complex genotypes
    • Arkush, K. D., Giese, A. R., Mendonca, H. L., McBride, A. M., Marty, G. D. & Hedrick, P. W. (2002). Resistance to three pathogens in the endangered winter-run chinook salmon (Oncorhynchus tshawytscha): effects of inbreeding and major histocompatibility complex genotypes. Canadian Journal of Fisheries and Aquatic Sciences 59, 966-975.
    • (2002) Canadian Journal of Fisheries and Aquatic Sciences , vol.59 , pp. 966-975
    • Arkush, K.D.1    Giese, A.R.2    Mendonca, H.L.3    McBride, A.M.4    Marty, G.D.5    Hedrick, P.W.6
  • 4
    • 0037884727 scopus 로고    scopus 로고
    • MHC studies in nonmodel vertebrates: What have we learned about natural selection in 15 years?
    • doi: 10.1046/j.1420-9101.2003.00531.x
    • Bernatchez, L. & Landry, C. (2003). MHC studies in nonmodel vertebrates: what have we learned about natural selection in 15 years? Journal of Evolutionary Biology 16, 363-377. doi: 10.1046/j.1420-9101.2003.00531.x
    • (2003) Journal of Evolutionary Biology , vol.16 , pp. 363-377
    • Bernatchez, L.1    Landry, C.2
  • 5
    • 17844391311 scopus 로고    scopus 로고
    • Patterns of variability at the major histocompatibility class II alpha locus in Atlantic salmon contrast with those at the class I locus
    • Consuegra, S., Megens, H. J., Leon, K., Stet, R. J. M. & Jordan, W. C. (2005). Patterns of variability at the major histocompatibility class II alpha locus in Atlantic salmon contrast with those at the class I locus. Immunogenetics 57, 16-24.
    • (2005) Immunogenetics , vol.57 , pp. 16-24
    • Consuegra, S.1    Megens, H.J.2    Leon, K.3    Stet, R.J.M.4    Jordan, W.C.5
  • 6
    • 0037427748 scopus 로고    scopus 로고
    • Likelihood of bottleneck event in the history of the Australian population of Atlantic salmon (Salmo salar L.)
    • Elliott, N. G. & Reilly, A. (2003). Likelihood of bottleneck event in the history of the Australian population of Atlantic salmon (Salmo salar L.). Aquaculture 215, 31-44.
    • (2003) Aquaculture , vol.215 , pp. 31-44
    • Elliott, N.G.1    Reilly, A.2
  • 8
    • 33847077933 scopus 로고    scopus 로고
    • Excoffier, L. G. L. & Schneider, S, 2005, Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online 1, 47-50
    • Excoffier, L. G. L. & Schneider, S. (2005). Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online 1, 47-50.
  • 9
    • 0033955861 scopus 로고    scopus 로고
    • Genetic improvement of cold-water fish species
    • doi: 10.1046/j.1365-2109.2000. 00389.x
    • Gjedrem, T. (2000). Genetic improvement of cold-water fish species. Aquaculture Research 31, 25-33. doi: 10.1046/j.1365-2109.2000. 00389.x
    • (2000) Aquaculture Research , vol.31 , pp. 25-33
    • Gjedrem, T.1
  • 10
    • 0028923217 scopus 로고
    • Complete coding sequence of rainbow trout MHC II beta-chain
    • doi: 10.1111/j.1365-3083.1995.tb03580.x
    • Glamann, J. (1995). Complete coding sequence of rainbow trout MHC II beta-chain. Scandinavian Journal of Immunology 41, 365-372. doi: 10.1111/j.1365-3083.1995.tb03580.x
    • (1995) Scandinavian Journal of Immunology , vol.41 , pp. 365-372
    • Glamann, J.1
  • 11
    • 85007320774 scopus 로고    scopus 로고
    • Goudet, J, 1995, FSTAT Version 1.2, a computer program to calculate F-statistics. Journal of Heredity 86, 485-486
    • Goudet, J. (1995). FSTAT (Version 1.2): a computer program to calculate F-statistics. Journal of Heredity 86, 485-486.
  • 13
    • 18744366617 scopus 로고    scopus 로고
    • The major histocompatibility class I locus in Atlantic salmon (Salmo salar L.): Polymorphism, linkage analysis and protein modelling
    • Grimholt, U., Drablos, F., Jorgensen, S. M., Hoyheim, B. & Stet, R. J. M. (2002). The major histocompatibility class I locus in Atlantic salmon (Salmo salar L.): polymorphism, linkage analysis and protein modelling. Immunogenetics 54, 570-581.
    • (2002) Immunogenetics , vol.54 , pp. 570-581
    • Grimholt, U.1    Drablos, F.2    Jorgensen, S.M.3    Hoyheim, B.4    Stet, R.J.M.5
  • 14
    • 0041657798 scopus 로고    scopus 로고
    • MHC polymorphism and disease resistance in Atlantic salmon (Salmo salar); facing pathogens with single expressed major histocompatibility class I and class II loci
    • Grimholt, U., Larsen, S., Nordmo, R., Midtlyng, P., Kjoeglum, S., Storset, A., Saebo, S. & Stet, R. J. M. (2003). MHC polymorphism and disease resistance in Atlantic salmon (Salmo salar); facing pathogens with single expressed major histocompatibility class I and class II loci. Immunogenetics 55, 210-219.
    • (2003) Immunogenetics , vol.55 , pp. 210-219
    • Grimholt, U.1    Larsen, S.2    Nordmo, R.3    Midtlyng, P.4    Kjoeglum, S.5    Storset, A.6    Saebo, S.7    Stet, R.J.M.8
  • 15
    • 33847077124 scopus 로고    scopus 로고
    • Hall, T. A. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 41, 95-98.
    • Hall, T. A. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 41, 95-98.
  • 16
    • 0027457729 scopus 로고
    • Cloning and sequence analysis of cDNAs encoding the MHC class II beta chain in Atlantic salmon (Salmo salar)
    • Hordvik, I., Grimholt, U., Fosse, V. M., Lie, O. & Endresen, C. (1993). Cloning and sequence analysis of cDNAs encoding the MHC class II beta chain in Atlantic salmon (Salmo salar). Immunogenetics 37, 437-441.
    • (1993) Immunogenetics , vol.37 , pp. 437-441
    • Hordvik, I.1    Grimholt, U.2    Fosse, V.M.3    Lie, O.4    Endresen, C.5
  • 18
    • 33645782248 scopus 로고    scopus 로고
    • Genetic diversity in a Tasmanian hatchery population of Atlantic salmon (Salmo salar L.) compared with its Canadian progenitor population
    • doi: 10.1111/j.1365-2109.2006.01463.x
    • Innes, B. H. & Elliott, N. G. (2006). Genetic diversity in a Tasmanian hatchery population of Atlantic salmon (Salmo salar L.) compared with its Canadian progenitor population. Aquaculture Research 37, 563-569. doi: 10.1111/j.1365-2109.2006.01463.x
    • (2006) Aquaculture Research , vol.37 , pp. 563-569
    • Innes, B.H.1    Elliott, N.G.2
  • 19
    • 0033778423 scopus 로고    scopus 로고
    • Do infectious diseases drive MHC diversity?
    • Jeffery, K. J. M. & Bangham, C. R. M. (2000). Do infectious diseases drive MHC diversity? Microbes and Infection 2, 1335-1341.
    • (2000) Microbes and Infection , vol.2 , pp. 1335-1341
    • Jeffery, K.J.M.1    Bangham, C.R.M.2
  • 21
    • 0035051254 scopus 로고    scopus 로고
    • Population structure of Atlantic salmon (Salmo salar L.): A range-wide perspective from microsatellite DNA variation
    • doi: 10.1046/j.1365-294X.2001. 01231.x
    • King, T. L., Kalinowski, S. T., Schill, W. B., Spidle, A. P. & Lubinski, B. A. (2001). Population structure of Atlantic salmon (Salmo salar L.): a range-wide perspective from microsatellite DNA variation. Molecular Ecology 10, 807-821. doi: 10.1046/j.1365-294X.2001. 01231.x
    • (2001) Molecular Ecology , vol.10 , pp. 807-821
    • King, T.L.1    Kalinowski, S.T.2    Schill, W.B.3    Spidle, A.P.4    Lubinski, B.A.5
  • 22
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings in Bioinformatics 5, 150-163.
    • (2004) Briefings in Bioinformatics , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 23
    • 0034755842 scopus 로고    scopus 로고
    • Comparative analysis of population structure across environments and geographical scales at major histocompatibility complex and microsatellite loci in Atlantic salmon (Salmo salar)
    • doi: 10.1046/j.1365-294X.2001.01383.x
    • Landry, C. & Bernatchez, L. (2001). Comparative analysis of population structure across environments and geographical scales at major histocompatibility complex and microsatellite loci in Atlantic salmon (Salmo salar). Molecular Ecology 10, 2525-2539. doi: 10.1046/j.1365-294X.2001.01383.x
    • (2001) Molecular Ecology , vol.10 , pp. 2525-2539
    • Landry, C.1    Bernatchez, L.2
  • 27
    • 0034043423 scopus 로고    scopus 로고
    • Major histocompatibility complex class II A genes in cichlid fishes: Identification, expression, linkage relationships, and haplotype variation
    • Murray, B. W., Shintani, S., Sultmann, H. & Klein, J. (2000). Major histocompatibility complex class II A genes in cichlid fishes: identification, expression, linkage relationships, and haplotype variation. Immunogenetics 51, 576-586.
    • (2000) Immunogenetics , vol.51 , pp. 576-586
    • Murray, B.W.1    Shintani, S.2    Sultmann, H.3    Klein, J.4
  • 29
    • 0001276478 scopus 로고    scopus 로고
    • Comparative genomics of medaka: The major histocompatibility complex (MHC)
    • Nonaka, M., Matsuo, M., Naruse, K. & Shima, A. (2001). Comparative genomics of medaka: the major histocompatibility complex (MHC). Marine Biotechnology 3, S141-S144.
    • (2001) Marine Biotechnology , vol.3
    • Nonaka, M.1    Matsuo, M.2    Naruse, K.3    Shima, A.4
  • 31
    • 0000262278 scopus 로고
    • Genepop (Version-1.2) - population genetics software for exact tests and ecumenicism
    • Raymond, M. & Rousset, F. (1995). Genepop (Version-1.2) - population genetics software for exact tests and ecumenicism. Journal of Heredity 86, 248-249.
    • (1995) Journal of Heredity , vol.86 , pp. 248-249
    • Raymond, M.1    Rousset, F.2
  • 32
    • 0033616753 scopus 로고    scopus 로고
    • Genetic differentiation between Tasmanian cultured Atlantic salmon (Salmo salar L.) and their ancestral Canadian population: Comparison of microsatellite DNA and allozyme and mitochondrial DNA variation
    • Reilly, A., Elliott, N. G., Grewe, P. M., Clabby, C., Powell, R. & Ward, R. D. (1999). Genetic differentiation between Tasmanian cultured Atlantic salmon (Salmo salar L.) and their ancestral Canadian population: comparison of microsatellite DNA and allozyme and mitochondrial DNA variation. Aquaculture 173, 459-469.
    • (1999) Aquaculture , vol.173 , pp. 459-469
    • Reilly, A.1    Elliott, N.G.2    Grewe, P.M.3    Clabby, C.4    Powell, R.5    Ward, R.D.6
  • 35
    • 0036088746 scopus 로고    scopus 로고
    • Structures of two major histocompatibility complex class I genes of the rainbow trout (Oncorhynchus mykiss)
    • Shum, B. P., Mason, P. M., Magor, K. E., Flodin, L. R., Stet, R. J. M. & Parham, P. (2002). Structures of two major histocompatibility complex class I genes of the rainbow trout (Oncorhynchus mykiss). Immunogenetics 54, 193-199.
    • (2002) Immunogenetics , vol.54 , pp. 193-199
    • Shum, B.P.1    Mason, P.M.2    Magor, K.E.3    Flodin, L.R.4    Stet, R.J.M.5    Parham, P.6
  • 36
    • 27744606052 scopus 로고    scopus 로고
    • The importance of immune gene variability (MHC) in evolutionary ecology and conservation
    • Sommer, S. (2005). The importance of immune gene variability (MHC) in evolutionary ecology and conservation. Frontiers in Zoology 2, 16.
    • (2005) Frontiers in Zoology , vol.2 , pp. 16
    • Sommer, S.1
  • 37
    • 0036373794 scopus 로고    scopus 로고
    • Unique haplotypes of co-segregating major histocompatibility class II A and class II B alleles in Atlantic salmon (Salmo salar) give rise to diverse class II genotypes
    • Stet, R. J. M., de Vries, B., Mudde, K., Hermsen, T., van Heerwaarden, J., Shum, B. P. & Grimholt, U. (2002). Unique haplotypes of co-segregating major histocompatibility class II A and class II B alleles in Atlantic salmon (Salmo salar) give rise to diverse class II genotypes. Immunogenetics 54, 320-331.
    • (2002) Immunogenetics , vol.54 , pp. 320-331
    • Stet, R.J.M.1    de Vries, B.2    Mudde, K.3    Hermsen, T.4    van Heerwaarden, J.5    Shum, B.P.6    Grimholt, U.7
  • 38
    • 0025255468 scopus 로고
    • Allelic genealogy under overdominant and frequency-dependent selection and polymorphism of major histocompatibility complex loci
    • Takahata, N. & Nei, M. (1990). Allelic genealogy under overdominant and frequency-dependent selection and polymorphism of major histocompatibility complex loci. Genetics 124, 967-978.
    • (1990) Genetics , vol.124 , pp. 967-978
    • Takahata, N.1    Nei, M.2
  • 39
    • 0028066159 scopus 로고
    • A comparison of allozymes and mitochondrial-DNA in Atlantic salmon from Tasmania and from the ancestral population in Canada
    • Ward, R. D., Grewe, P. M. & Smolenski, A. J. (1994). A comparison of allozymes and mitochondrial-DNA in Atlantic salmon from Tasmania and from the ancestral population in Canada. Aquaculture 126, 257-264.
    • (1994) Aquaculture , vol.126 , pp. 257-264
    • Ward, R.D.1    Grewe, P.M.2    Smolenski, A.J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.