-
1
-
-
0036794074
-
The SBP2 and 15.5 kD/Snu13p proteins share the same RNA binding domain: Identification of SBP2 amino acids important to SECIS RNA binding
-
Allmang, C., P. Carbon, and A. Krol. 2002. The SBP2 and 15.5 kD/Snu13p proteins share the same RNA binding domain: identification of SBP2 amino acids important to SECIS RNA binding. RNA 8:1308-1318.
-
(2002)
RNA
, vol.8
, pp. 1308-1318
-
-
Allmang, C.1
Carbon, P.2
Krol, A.3
-
3
-
-
0034637111
-
The complete atomic structure of the large ribosomal subunit at 2.4 Å resolution
-
Ban, N., P. Nissen, J. Hansen, P. B. Moore, and T. A. Steitz. 2000. The complete atomic structure of the large ribosomal subunit at 2.4 Å resolution. Science 289:905-920.
-
(2000)
Science
, vol.289
, pp. 905-920
-
-
Ban, N.1
Nissen, P.2
Hansen, J.3
Moore, P.B.4
Steitz, T.A.5
-
4
-
-
77957219751
-
Mutational analysis of an essential binding site for the U3 snoRNA in the 5′ external transcribed spacer of yeast pre-rRNA
-
Beltrame, M., Y. Henry, and D. Tollervey. 1994. Mutational analysis of an essential binding site for the U3 snoRNA in the 5′ external transcribed spacer of yeast pre-rRNA. Nucleic Acids Res. 22:5139-5147.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 5139-5147
-
-
Beltrame, M.1
Henry, Y.2
Tollervey, D.3
-
5
-
-
0029093602
-
Base pairing between U3 and the pre-ribosomal RNA is required for 18S rRNA synthesis
-
Beltrame, M., and D. Tollervey. 1995. Base pairing between U3 and the pre-ribosomal RNA is required for 18S rRNA synthesis. EMBO J. 14:4350-4356.
-
(1995)
EMBO J
, vol.14
, pp. 4350-4356
-
-
Beltrame, M.1
Tollervey, D.2
-
6
-
-
0028302637
-
Synthetic lethality with fibrillarin identifies NOP77p, a nucleolar protein required for prerRNA processing and modification
-
Berges, T., E. Petfalski, D. Tollervey, and E. C. Hurt. 1994. Synthetic lethality with fibrillarin identifies NOP77p, a nucleolar protein required for prerRNA processing and modification. EMBO J. 13:3136-3148.
-
(1994)
EMBO J
, vol.13
, pp. 3136-3148
-
-
Berges, T.1
Petfalski, E.2
Tollervey, D.3
Hurt, E.C.4
-
7
-
-
0033548450
-
U3 small nucleolar RNA is essential for cleavage at sites 1, 2 and 3 in pre-rRNA and determines which rRNA processing pathway is taken in Xenopus oocytes
-
Borovjagin, A. V., and S. A. Gerbi. 1999. U3 small nucleolar RNA is essential for cleavage at sites 1, 2 and 3 in pre-rRNA and determines which rRNA processing pathway is taken in Xenopus oocytes. J. Mol. Biol. 286:1347-1363.
-
(1999)
J. Mol. Biol
, vol.286
, pp. 1347-1363
-
-
Borovjagin, A.V.1
Gerbi, S.A.2
-
8
-
-
0035726287
-
Xenopus U3 snoRNA GAC-Box A′ and Box A sequences play distinct functional roles in rRNA processing
-
Borovjagin, A. V., and S. A. Gerbi. 2001. Xenopus U3 snoRNA GAC-Box A′ and Box A sequences play distinct functional roles in rRNA processing. Mol. Cell. Biol. 21:6210-6221.
-
(2001)
Mol. Cell. Biol
, vol.21
, pp. 6210-6221
-
-
Borovjagin, A.V.1
Gerbi, S.A.2
-
9
-
-
2442670274
-
Xenopus U3 snoRNA docks on pre-rRNA through a novel base-pairing interaction
-
Borovjagin, A. V., and S. A. Gerbi. 2004. Xenopus U3 snoRNA docks on pre-rRNA through a novel base-pairing interaction. RNA 10:942-953.
-
(2004)
RNA
, vol.10
, pp. 942-953
-
-
Borovjagin, A.V.1
Gerbi, S.A.2
-
10
-
-
24744441329
-
An evolutionary intra-molecular shift in the preferred U3 snoRNA binding site on pre-ribosomal RNA
-
Borovjagin, A. V., and S. A. Gerbi. 2005. An evolutionary intra-molecular shift in the preferred U3 snoRNA binding site on pre-ribosomal RNA. Nucleic Acids Res. 33:4995-5005.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 4995-5005
-
-
Borovjagin, A.V.1
Gerbi, S.A.2
-
11
-
-
0037099680
-
Site-specific cross-linking analyses reveal an asymmetric protein distribution for a box C/D snoRNP
-
Cahill, N. M., K. Friend, W. Speckmann, Z. H. Li, R. M. Terns, M. P. Terns, and J. A. Steitz. 2002. Site-specific cross-linking analyses reveal an asymmetric protein distribution for a box C/D snoRNP. EMBO J. 21:3816-3828.
-
(2002)
EMBO J
, vol.21
, pp. 3816-3828
-
-
Cahill, N.M.1
Friend, K.2
Speckmann, W.3
Li, Z.H.4
Terns, R.M.5
Terns, M.P.6
Steitz, J.A.7
-
12
-
-
3142608984
-
Joint X-ray and NMR refinement of the yeast L30e-mRNA complex
-
Chao, J. A., and J. R. Williamson. 2004. Joint X-ray and NMR refinement of the yeast L30e-mRNA complex. Structure 12:1165-1176.
-
(2004)
Structure
, vol.12
, pp. 1165-1176
-
-
Chao, J.A.1
Williamson, J.R.2
-
13
-
-
20144374350
-
Reconstitution of archaeal H/ACA small ribonucleoprotein complexes active in pseudouridylation
-
Charpentier, B., S. Muller, and C. Branlant. 2005. Reconstitution of archaeal H/ACA small ribonucleoprotein complexes active in pseudouridylation. Nucleic Acids Res. 33:3133-3144.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 3133-3144
-
-
Charpentier, B.1
Muller, S.2
Branlant, C.3
-
14
-
-
4444326475
-
The archaeal sRNA binding protein L7Ae has a 3D structure very similar to that of its eukaryal counterpart while having a broader RNA-binding specificity
-
Charron, C., X. Manival, A. Clery, V. Senty-Segault, B. Charpentier, N. Mannier-Gourrier, C. Branlant, and A. Aubry. 2004. The archaeal sRNA binding protein L7Ae has a 3D structure very similar to that of its eukaryal counterpart while having a broader RNA-binding specificity. J. Mol. Biol. 342:757-773.
-
(2004)
J. Mol. Biol
, vol.342
, pp. 757-773
-
-
Charron, C.1
Manival, X.2
Clery, A.3
Senty-Segault, V.4
Charpentier, B.5
Mannier-Gourrier, N.6
Branlant, C.7
Aubry, A.8
-
15
-
-
12844270442
-
The snRNP 15.5K protein folds its cognate K-turn RNA: A combined theoretical and biochemical study
-
Cojocaru, V., S. Nottrott, R. Klement, and T. M. Jovin. 2005. The snRNP 15.5K protein folds its cognate K-turn RNA: a combined theoretical and biochemical study. RNA 11:197-209.
-
(2005)
RNA
, vol.11
, pp. 197-209
-
-
Cojocaru, V.1
Nottrott, S.2
Klement, R.3
Jovin, T.M.4
-
16
-
-
0036629250
-
rRNA modifications and ribosome function
-
Decatur, W. A., and M. J. Fournier. 2002. rRNA modifications and ribosome function. Trends Biochem. Sci. 27:344-351.
-
(2002)
Trends Biochem. Sci
, vol.27
, pp. 344-351
-
-
Decatur, W.A.1
Fournier, M.J.2
-
17
-
-
1642458391
-
Analysis of Snu13p mutations reveals differential interactions with the U4 snRNA and U3 snoRNA
-
Dobbyn, H. C., and R. T. O'Keefe. 2004. Analysis of Snu13p mutations reveals differential interactions with the U4 snRNA and U3 snoRNA. RNA 10:308-320.
-
(2004)
RNA
, vol.10
, pp. 308-320
-
-
Dobbyn, H.C.1
O'Keefe, R.T.2
-
18
-
-
18544371820
-
90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors
-
Grandi, P., V. Rybin, J. Bassler, E. Petfalski, D. Strauss, M. Marzioch, T. Schafer, B. Kuster, H. Tschochner, D. Tollervey, A. C. Gavin, and E. Hurt. 2002. 90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors. Mol. Cell 10:105-115.
-
(2002)
Mol. Cell
, vol.10
, pp. 105-115
-
-
Grandi, P.1
Rybin, V.2
Bassler, J.3
Petfalski, E.4
Strauss, D.5
Marzioch, M.6
Schafer, T.7
Kuster, B.8
Tschochner, H.9
Tollervey, D.10
Gavin, A.C.11
Hurt, E.12
-
19
-
-
0037073729
-
The hU3-55K protein requires 15.5K binding to the box B/C motif as well as flanking RNA elements for its association with the U3 small nucleolar RNA in vitro
-
Granneman, S., G. J. Pruijn, W. Horstman, W. J. van Venrooiy, R. Luhrmann, and N. J. Watkins. 2002. The hU3-55K protein requires 15.5K binding to the box B/C motif as well as flanking RNA elements for its association with the U3 small nucleolar RNA in vitro. J. Biol. Chem. 277:48490-48500.
-
(2002)
J. Biol. Chem
, vol.277
, pp. 48490-48500
-
-
Granneman, S.1
Pruijn, G.J.2
Horstman, W.3
van Venrooiy, W.J.4
Luhrmann, R.5
Watkins, N.J.6
-
20
-
-
2142754126
-
Ribosome biogenesis: Of knobs and RNA processing
-
Granneman, S., and S. J. Baserga. 2004. Ribosome biogenesis: of knobs and RNA processing. Exp. Cell Res. 296:43-50.
-
(2004)
Exp. Cell Res
, vol.296
, pp. 43-50
-
-
Granneman, S.1
Baserga, S.J.2
-
21
-
-
2342638215
-
Structure of protein L7Ae bound to a K-turn derived from an archaeal box H/ACA sRNA at 1.8 Å resolution
-
Hamma, T., and A. R. Ferre-D'Amare. 2004. Structure of protein L7Ae bound to a K-turn derived from an archaeal box H/ACA sRNA at 1.8 Å resolution. Structure 12:893-903.
-
(2004)
Structure
, vol.12
, pp. 893-903
-
-
Hamma, T.1
Ferre-D'Amare, A.R.2
-
22
-
-
0032401740
-
Nhp2p and Nop10p are essential for the function of H/ACA snoRNPs
-
Henras, A., Y. Henry, C. Bousquet-Antonelli, J. Noaillac-Depeyre, J. P. Gelugne, and M. Caizergues-Ferrer. 1998. Nhp2p and Nop10p are essential for the function of H/ACA snoRNPs. EMBO J. 17:7078-7090.
-
(1998)
EMBO J
, vol.17
, pp. 7078-7090
-
-
Henras, A.1
Henry, Y.2
Bousquet-Antonelli, C.3
Noaillac-Depeyre, J.4
Gelugne, J.P.5
Caizergues-Ferrer, M.6
-
23
-
-
0025932166
-
-
Hughes, J. M., and M. Ares, Jr. 1991. Depletion of U3 small nucleolar RNA inhibits cleavage in the 5′ external transcribed spacer of yeast pre-ribosomal RNA and impairs formation of 18S ribosomal RNA. EMBO J.10:4231-4239.
-
Hughes, J. M., and M. Ares, Jr. 1991. Depletion of U3 small nucleolar RNA inhibits cleavage in the 5′ external transcribed spacer of yeast pre-ribosomal RNA and impairs formation of 18S ribosomal RNA. EMBO J.10:4231-4239.
-
-
-
-
24
-
-
0035798607
-
A second exon splicing silencer within human immunodeficiency virus type 1 tat exon 2 represses splicing of Tat mRNA and binds protein hnRNP H
-
Jacquenet, S., A. Mereau, P. S. Bilodeau, L. Damier, C. M. Stoltzfus, and C. Branlant. 2001. A second exon splicing silencer within human immunodeficiency virus type 1 tat exon 2 represses splicing of Tat mRNA and binds protein hnRNP H. J. Biol. Chem. 276:40464-40475.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 40464-40475
-
-
Jacquenet, S.1
Mereau, A.2
Bilodeau, P.S.3
Damier, L.4
Stoltzfus, C.M.5
Branlant, C.6
-
26
-
-
0024296524
-
Nucleotide sequence determination and secondary structure of Xenopus U3 snRNA
-
Jeppesen, C., B. Stebbins-Boaz, and S. A. Gerbi. 1988. Nucleotide sequence determination and secondary structure of Xenopus U3 snRNA. Nucleic Acids Res. 16:2127-2148.
-
(1988)
Nucleic Acids Res
, vol.16
, pp. 2127-2148
-
-
Jeppesen, C.1
Stebbins-Boaz, B.2
Gerbi, S.A.3
-
27
-
-
0025276512
-
The U3 small nucleolar ribonucleoprotein functions in the first step of preribosomal RNA processing
-
Kass, S., K. Tyc, J. A. Steitz, and B. Sollner-Webb. 1990. The U3 small nucleolar ribonucleoprotein functions in the first step of preribosomal RNA processing. Cell 60:897-908.
-
(1990)
Cell
, vol.60
, pp. 897-908
-
-
Kass, S.1
Tyc, K.2
Steitz, J.A.3
Sollner-Webb, B.4
-
28
-
-
0035898634
-
Small nucleolar RNA-guided post-transcriptional modification of cellular RNAs
-
Kiss, T. 2001. Small nucleolar RNA-guided post-transcriptional modification of cellular RNAs. EMBO J. 20:3617-3622.
-
(2001)
EMBO J
, vol.20
, pp. 3617-3622
-
-
Kiss, T.1
-
29
-
-
0035423087
-
The kink-turn: A new RNA secondary structure motif
-
Klein, D. J., T. M. Schmeing, P. B. Moore, and T. A. Steitz. 2001. The kink-turn: a new RNA secondary structure motif. EMBO J. 20:4214-4221.
-
(2001)
EMBO J
, vol.20
, pp. 4214-4221
-
-
Klein, D.J.1
Schmeing, T.M.2
Moore, P.B.3
Steitz, T.A.4
-
30
-
-
0028225137
-
A novel RNA-binding motif in omnipotent suppressors of translation termination, ribosomal proteins and a ribosome modification enzyme?
-
Koonin, E. V., P. Bork, and C. Sander. 1994. A novel RNA-binding motif in omnipotent suppressors of translation termination, ribosomal proteins and a ribosome modification enzyme? Nucleic Acids Res. 22:2166-2167.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 2166-2167
-
-
Koonin, E.V.1
Bork, P.2
Sander, C.3
-
31
-
-
0033509092
-
Protein trans-acting factors involved in ribosome biogenesis in Saccharomyces cerevisiae
-
Kressler, D., P. Linder, and J. de La Cruz. 1999. Protein trans-acting factors involved in ribosome biogenesis in Saccharomyces cerevisiae. Mol. Cell. Biol. 19:7897-7912.
-
(1999)
Mol. Cell. Biol
, vol.19
, pp. 7897-7912
-
-
Kressler, D.1
Linder, P.2
de La Cruz, J.3
-
32
-
-
0037082424
-
Archaeal ribosomal protein L7 is a functional homolog of the eukaryotic 15.5kD/Snu13p snoRNP core protein
-
Kuhn, J. F., E. J. Tran, and E. S. Maxwell. 2002. Archaeal ribosomal protein L7 is a functional homolog of the eukaryotic 15.5kD/Snu13p snoRNP core protein. Nucleic Acids Res. 30:931-941.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 931-941
-
-
Kuhn, J.F.1
Tran, E.J.2
Maxwell, E.S.3
-
33
-
-
0030614970
-
RNA apatamers for yeast ribosomal protein L32 have a conserved purine-rich internal loop
-
Li, H., and S. A. White. 1997. RNA apatamers for yeast ribosomal protein L32 have a conserved purine-rich internal loop. RNA 3:245-254.
-
(1997)
RNA
, vol.3
, pp. 245-254
-
-
Li, H.1
White, S.A.2
-
34
-
-
0027500884
-
Isolation of U3 snoRNP from CHO cells: A novel 55-kDa protein binds to the central part of U3 snoRNA
-
Lubben, B., C. Marshallsay, N. Rottmann, and R. Luhrmann. 1993. Isolation of U3 snoRNP from CHO cells: a novel 55-kDa protein binds to the central part of U3 snoRNA. Nucleic Acids Res. 21:5377-5385.
-
(1993)
Nucleic Acids Res
, vol.21
, pp. 5377-5385
-
-
Lubben, B.1
Marshallsay, C.2
Rottmann, N.3
Luhrmann, R.4
-
35
-
-
0034666101
-
Interaction of the U3-55k protein with U3 snoRNA is mediated by the box B/C motif of U3 and the WD repeats of U3-55k
-
Lukowiak, A. A., S. Granneman, S. A. Mattox, W. A. Speckmann, K. Jones, H. Pluk, W. J. Venrooij, R. M. Terns, and M. P. Terns. 2000. Interaction of the U3-55k protein with U3 snoRNA is mediated by the box B/C motif of U3 and the WD repeats of U3-55k. Nucleic Acids Res. 28:3462-3471.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 3462-3471
-
-
Lukowiak, A.A.1
Granneman, S.2
Mattox, S.A.3
Speckmann, W.A.4
Jones, K.5
Pluk, H.6
Venrooij, W.J.7
Terns, R.M.8
Terns, M.P.9
-
36
-
-
0028244439
-
The POP1 gene encodes a protein component common to the RNase MRP and RNase P ribonucleoproteins
-
Lygerou, Z., P. Mitchell, E. Petfalski, B. Seraphin, and D. Tollervey. 1994. The POP1 gene encodes a protein component common to the RNase MRP and RNase P ribonucleoproteins. Genes Dev. 8:1423-1433.
-
(1994)
Genes Dev
, vol.8
, pp. 1423-1433
-
-
Lygerou, Z.1
Mitchell, P.2
Petfalski, E.3
Seraphin, B.4
Tollervey, D.5
-
37
-
-
0032710024
-
A novel loop-loop recognition motif in the yeast ribosomal protein L30 autoregulatory RNA complex
-
Mao, H., S. A. White, and J. R. Williamson. 1999. A novel loop-loop recognition motif in the yeast ribosomal protein L30 autoregulatory RNA complex. Nat. Struct. Biol 6:1139-1147.
-
(1999)
Nat. Struct. Biol
, vol.6
, pp. 1139-1147
-
-
Mao, H.1
White, S.A.2
Williamson, J.R.3
-
38
-
-
0038043490
-
A structural, phylogenetic, and functional study of 15.5-kD/Snu13 protein binding on U3 small nucleolar RNA
-
Marmier-Gourrier, N., A. Clery, V. Senty-Segault, B. Charpentier, F. Schlotter, F. Leclerc, R. Fournier, and C. Branlant. 2003. A structural, phylogenetic, and functional study of 15.5-kD/Snu13 protein binding on U3 small nucleolar RNA. RNA 9:821-838.
-
(2003)
RNA
, vol.9
, pp. 821-838
-
-
Marmier-Gourrier, N.1
Clery, A.2
Senty-Segault, V.3
Charpentier, B.4
Schlotter, F.5
Leclerc, F.6
Fournier, R.7
Branlant, C.8
-
40
-
-
0031592930
-
An in vivo and in vitro structure-function analysis of the Saccharomyces cerevisiae U3A snoRNP: Protein-RNA contacts and base-pair interaction with the pre-ribosomal RNA
-
Mereau, A., R. Fournier, A. Gregoire, A. Mougin, P. Fabrizio, R. Luhrmann, and C. Branlant. 1997. An in vivo and in vitro structure-function analysis of the Saccharomyces cerevisiae U3A snoRNP: protein-RNA contacts and base-pair interaction with the pre-ribosomal RNA. J. Mol. Biol. 273:552-571.
-
(1997)
J. Mol. Biol
, vol.273
, pp. 552-571
-
-
Mereau, A.1
Fournier, R.2
Gregoire, A.3
Mougin, A.4
Fabrizio, P.5
Luhrmann, R.6
Branlant, C.7
-
41
-
-
2342475659
-
Molecular basis of box C/D RNA-protein interactions: Cocrystal structure of archaeal L7Ae and a box C/D RNA
-
Moore, T., Y. Zhang, M. O. Fenley, and H. Li. 2004. Molecular basis of box C/D RNA-protein interactions: cocrystal structure of archaeal L7Ae and a box C/D RNA. Structure 12:807-818.
-
(2004)
Structure
, vol.12
, pp. 807-818
-
-
Moore, T.1
Zhang, Y.2
Fenley, M.O.3
Li, H.4
-
42
-
-
0027447757
-
Yeast snR30 is a small nucleolar RNA required for 18S rRNA synthesis
-
Morrissey, J. P., and D. Tollervey. 1993. Yeast snR30 is a small nucleolar RNA required for 18S rRNA synthesis. Mol. Cell. Biol. 13:2469-2477.
-
(1993)
Mol. Cell. Biol
, vol.13
, pp. 2469-2477
-
-
Morrissey, J.P.1
Tollervey, D.2
-
43
-
-
0029973545
-
Secondary structure of the yeast Saccharomyces cerevisiae pre-U3A snoRNA and its implication for splicing efficiency
-
Mougin, A., A. Gregoire, J. Banroques, V. Segault, R. Fournier, F. Brule, M. Chevrier-Miller, and C. Branlant. 1996. Secondary structure of the yeast Saccharomyces cerevisiae pre-U3A snoRNA and its implication for splicing efficiency. RNA 2:1079-1093.
-
(1996)
RNA
, vol.2
, pp. 1079-1093
-
-
Mougin, A.1
Gregoire, A.2
Banroques, J.3
Segault, V.4
Fournier, R.5
Brule, F.6
Chevrier-Miller, M.7
Branlant, C.8
-
44
-
-
0036297657
-
Direct probing of RNA structure and RNA-protein interactions in purified HeLa cell's and yeast spliceosomal U4/U6U5 tri-snRNP particles
-
Mougin, A., A. Gottschalk, P. Fabrizio, R. Luhrmann, and C. Branlant. 2002. Direct probing of RNA structure and RNA-protein interactions in purified HeLa cell's and yeast spliceosomal U4/U6U5 tri-snRNP particles. J. Mol. Biol. 317:631-649.
-
(2002)
J. Mol. Biol
, vol.317
, pp. 631-649
-
-
Mougin, A.1
Gottschalk, A.2
Fabrizio, P.3
Luhrmann, R.4
Branlant, C.5
-
45
-
-
18644372079
-
60S pre-ribosome formation viewed from assembly in the nucleolus until export to the cytoplasm
-
Nissan, T. A., J. Bassler, E. Petfalski, D. Tollervey, and E. Hurt. 2002. 60S pre-ribosome formation viewed from assembly in the nucleolus until export to the cytoplasm. EMBO J. 21:5539-5547.
-
(2002)
EMBO J
, vol.21
, pp. 5539-5547
-
-
Nissan, T.A.1
Bassler, J.2
Petfalski, E.3
Tollervey, D.4
Hurt, E.5
-
46
-
-
29144449192
-
The K-loop, a general feature of the Pyrococcus C/D guide RNAs, is an RNA structural motif related to the K-turn
-
Nolivos, S., A. J. Carpousis, and B. Clouet-d'Orval. 2005. The K-loop, a general feature of the Pyrococcus C/D guide RNAs, is an RNA structural motif related to the K-turn. Nucleic Acids Res. 33:6507-6514.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 6507-6514
-
-
Nolivos, S.1
Carpousis, A.J.2
Clouet-d'Orval, B.3
-
47
-
-
0033229873
-
Functional interaction of a novel 15.5kD [U4/U6.U5] tri-snRNP protein with the 5′ stem-loop of U4 snRNA
-
Nottrott, S., K. Hartmuth, P. Fabrizio, H. Urlaub, I. Vidovic, R. Ficner, and R. Luhrmann. 1999. Functional interaction of a novel 15.5kD [U4/U6.U5] tri-snRNP protein with the 5′ stem-loop of U4 snRNA. EMBO J. 18:6119-6133.
-
(1999)
EMBO J
, vol.18
, pp. 6119-6133
-
-
Nottrott, S.1
Hartmuth, K.2
Fabrizio, P.3
Urlaub, H.4
Vidovic, I.5
Ficner, R.6
Luhrmann, R.7
-
48
-
-
0037107418
-
Hierarchical, clustered protein interactions with U4/U6 snRNA: A biochemical role for U4/U6 proteins
-
Nottrott, S., H. Urlaub, and R. Luhrmann. 2002. Hierarchical, clustered protein interactions with U4/U6 snRNA: a biochemical role for U4/U6 proteins. EMBO J. 21:5527-5538.
-
(2002)
EMBO J
, vol.21
, pp. 5527-5538
-
-
Nottrott, S.1
Urlaub, H.2
Luhrmann, R.3
-
49
-
-
0037117533
-
In vitro reconstitution and activity of a C/D box methylation guide ribonucleoprotein complex
-
Omer, A. D., S. Ziesche, H. Ebhardt, and P. P. Dennis. 2002. In vitro reconstitution and activity of a C/D box methylation guide ribonucleoprotein complex. Proc. Natl. Acad. Sci. USA 99:5289-5294.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 5289-5294
-
-
Omer, A.D.1
Ziesche, S.2
Ebhardt, H.3
Dennis, P.P.4
-
50
-
-
20544468675
-
Structural comparison of yeast snoRNP and spliceosomal protein Snu13p with its homologs
-
Oruganti, S., Y. Zhang, and H. Li. 2005. Structural comparison of yeast snoRNP and spliceosomal protein Snu13p with its homologs. Biochem. Biophys. Res. Commun. 333:550-554.
-
(2005)
Biochem. Biophys. Res. Commun
, vol.333
, pp. 550-554
-
-
Oruganti, S.1
Zhang, Y.2
Li, H.3
-
51
-
-
0023395345
-
Structural analysis of the human U3 ribonucleoprotein particle reveal a conserved sequence available for base pairing with pre-rRNA
-
Parker, K. A., and J. A. Steitz. 1987. Structural analysis of the human U3 ribonucleoprotein particle reveal a conserved sequence available for base pairing with pre-rRNA. Mol. Cell. Biol. 7:2899-2913.
-
(1987)
Mol. Cell. Biol
, vol.7
, pp. 2899-2913
-
-
Parker, K.A.1
Steitz, J.A.2
-
52
-
-
0031982809
-
cDNA cloning and characterization of the human U3 small nucleolar ribonucleo-protein complex-associated 55-kilodalton protein
-
Pluk, H., J. Soffner, R. Luhrmann, and W. J. van Venrooij. 1998. cDNA cloning and characterization of the human U3 small nucleolar ribonucleo-protein complex-associated 55-kilodalton protein. Mol. Cell. Biol. 18:488-498.
-
(1998)
Mol. Cell. Biol
, vol.18
, pp. 488-498
-
-
Pluk, H.1
Soffner, J.2
Luhrmann, R.3
van Venrooij, W.J.4
-
53
-
-
0037324527
-
Binding of L7Ae protein to the K-turn of archaeal snoRNAs: A shared RNA binding motif for C/D and H/ACA box snoRNAs in Archaea
-
Rozhdestvensky, T. S., T. H. Tang, I. V. Tchirkova, J. Brosius, J. P. Bachellerie, and A. Huttenhofer. 2003. Binding of L7Ae protein to the K-turn of archaeal snoRNAs: a shared RNA binding motif for C/D and H/ACA box snoRNAs in Archaea. Nucleic Acids Res. 31:869-877.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 869-877
-
-
Rozhdestvensky, T.S.1
Tang, T.H.2
Tchirkova, I.V.3
Brosius, J.4
Bachellerie, J.P.5
Huttenhofer, A.6
-
54
-
-
0031816004
-
Functional mapping of the U3 small nucleolar RNA from the yeast Saccharomyces cerevisiae
-
Samarsky, D. A., and M. J. Fournier. 1998. Functional mapping of the U3 small nucleolar RNA from the yeast Saccharomyces cerevisiae. Mol. Cell. Biol. 18:3431-3444.
-
(1998)
Mol. Cell. Biol
, vol.18
, pp. 3431-3444
-
-
Samarsky, D.A.1
Fournier, M.J.2
-
55
-
-
0034268836
-
Structure of functionally activated small ribosomal subunit at 3.3 angstroms resolution
-
Schluenzen, F., A. Tocilj, R. Zarivach, J. Harms, M. Gluehmann, D. Janell, A. Bashan, H. Bartels, I. Agmon, F. Franceschi, and A. Yonath. 2000. Structure of functionally activated small ribosomal subunit at 3.3 angstroms resolution. Cell 102:615-623.
-
(2000)
Cell
, vol.102
, pp. 615-623
-
-
Schluenzen, F.1
Tocilj, A.2
Zarivach, R.3
Harms, J.4
Gluehmann, M.5
Janell, D.6
Bashan, A.7
Bartels, H.8
Agmon, I.9
Franceschi, F.10
Yonath, A.11
-
56
-
-
33748778456
-
RNA structural requirements for the association of the spliceosomal hPrp31 protein with the U4 and U4atac small nuclear ribonucleoproteins
-
Schultz, A., S. Nottrott, K. Hartmuth, and R. Luhrmann. 2006. RNA structural requirements for the association of the spliceosomal hPrp31 protein with the U4 and U4atac small nuclear ribonucleoproteins. J. Biol. Chem. 281:28278-28286.
-
(2006)
J. Biol. Chem
, vol.281
, pp. 28278-28286
-
-
Schultz, A.1
Nottrott, S.2
Hartmuth, K.3
Luhrmann, R.4
-
57
-
-
33745477012
-
Protein-protein and protein-RNA contacts both contribute to the 15.5K-mediated assembly of the U4/U6 snRNP and the box C/D snoRNPs
-
Schultz, A., S. Nottrott, N. J. Watkins, and R. Luhrmann. 2006. Protein-protein and protein-RNA contacts both contribute to the 15.5K-mediated assembly of the U4/U6 snRNP and the box C/D snoRNPs. Mol. Cell. Biol. 26:5146-5154.
-
(2006)
Mol. Cell. Biol
, vol.26
, pp. 5146-5154
-
-
Schultz, A.1
Nottrott, S.2
Watkins, N.J.3
Luhrmann, R.4
-
58
-
-
0026652896
-
An experimental study of Saccharomyces cerevisiae U3 snRNA conformation in solution
-
Segault, V., A. Mougin, A. Gregoire, J. Banroques, and C. Branlant. 1992. An experimental study of Saccharomyces cerevisiae U3 snRNA conformation in solution. Nucleic Acids Res. 20:3443-3451.
-
(1992)
Nucleic Acids Res
, vol.20
, pp. 3443-3451
-
-
Segault, V.1
Mougin, A.2
Gregoire, A.3
Banroques, J.4
Branlant, C.5
-
59
-
-
0032771416
-
Base pairing between U3 small nucleolar RNA and the 5′ end of 18S rRNA is required for pre-rRNA processing
-
Sharma, K., and D. Tollervey. 1999. Base pairing between U3 small nucleolar RNA and the 5′ end of 18S rRNA is required for pre-rRNA processing. Mol. Cell. Biol. 19:6012-6019.
-
(1999)
Mol. Cell. Biol
, vol.19
, pp. 6012-6019
-
-
Sharma, K.1
Tollervey, D.2
-
60
-
-
0033595016
-
Purification of the yeast U4/U6.U5 small nuclear ribonucleoprotein particle and identification of its proteins
-
Stevens, S. W., and J. Abelson. 1999. Purification of the yeast U4/U6.U5 small nuclear ribonucleoprotein particle and identification of its proteins. Proc. Natl. Acad. Sci. USA 96:7226-7231.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 7226-7231
-
-
Stevens, S.W.1
Abelson, J.2
-
61
-
-
24044431940
-
Molecular basis for RNA kink-turn recognition by the h15.5K small RNP protein
-
Szewczak, L. B., J. S. Gabrielsen, S. J. Degregorio, S. A. Strobel, and J. A. Steitz. 2005. Molecular basis for RNA kink-turn recognition by the h15.5K small RNP protein. RNA 11:1407-1419.
-
(2005)
RNA
, vol.11
, pp. 1407-1419
-
-
Szewczak, L.B.1
Gabrielsen, J.S.2
Degregorio, S.J.3
Strobel, S.A.4
Steitz, J.A.5
-
62
-
-
0036176517
-
Small nucleolar RNAs: Versatile trans-acting molecules of ancient evolutionary origin
-
Terns, M. P., and R. M. Terns. 2002. Small nucleolar RNAs: versatile trans-acting molecules of ancient evolutionary origin. Gene Expr. 10:17-39.
-
(2002)
Gene Expr
, vol.10
, pp. 17-39
-
-
Terns, M.P.1
Terns, R.M.2
-
63
-
-
22244483207
-
Induced fit of RNA on binding the L7Ae protein to the kink-turn motif
-
Turner, B., S. E. Melcher, T. J. Wilson, D. G. Norman, and D. M. Lilley. 2005. Induced fit of RNA on binding the L7Ae protein to the kink-turn motif. RNA 11:1192-1200.
-
(2005)
RNA
, vol.11
, pp. 1192-1200
-
-
Turner, B.1
Melcher, S.E.2
Wilson, T.J.3
Norman, D.G.4
Lilley, D.M.5
-
64
-
-
0026783010
-
A new interaction between the mouse 5′ external transcribed spacer of pre-rRNA and U3 snRNA detected by psoralen crosslinking
-
Tyc, K., and J. A. Steitz. 1992. A new interaction between the mouse 5′ external transcribed spacer of pre-rRNA and U3 snRNA detected by psoralen crosslinking. Nucleic Acids Res. 20:5375-5382.
-
(1992)
Nucleic Acids Res
, vol.20
, pp. 5375-5382
-
-
Tyc, K.1
Steitz, J.A.2
-
65
-
-
0033367325
-
Ribosome synthesis in Saccharomyces cerevisiae
-
Venema, J., and D. Tollervey. 1999. Ribosome synthesis in Saccharomyces cerevisiae. Annu. Rev. Genet. 33:261-311.
-
(1999)
Annu. Rev. Genet
, vol.33
, pp. 261-311
-
-
Venema, J.1
Tollervey, D.2
-
66
-
-
0033730378
-
Yeast Rrp9p is an evolutionarily conserved U3 snoRNP protein essential for early pre-rRNA processing cleavages and requires box C for its association
-
Venema, J., H. R. Vos, A. W. Faber, W. J. van Venroovj, and H. A. Raue. 2000. Yeast Rrp9p is an evolutionarily conserved U3 snoRNP protein essential for early pre-rRNA processing cleavages and requires box C for its association. RNA 6:1660-1671.
-
(2000)
RNA
, vol.6
, pp. 1660-1671
-
-
Venema, J.1
Vos, H.R.2
Faber, A.W.3
van Venroovj, W.J.4
Raue, H.A.5
-
67
-
-
0037013939
-
Mammalian and yeast U3 snoRNPs are matured in specific and related nuclear compartments
-
Verheggen, C., D. L. Lafontaine, D. Samarsky, J. Mouaikel, J. M. Blanchard, R. Bordonne, and E. Bertrand. 2002. Mammalian and yeast U3 snoRNPs are matured in specific and related nuclear compartments. EMBO J. 21:2736-2745.
-
(2002)
EMBO J
, vol.21
, pp. 2736-2745
-
-
Verheggen, C.1
Lafontaine, D.L.2
Samarsky, D.3
Mouaikel, J.4
Blanchard, J.M.5
Bordonne, R.6
Bertrand, E.7
-
68
-
-
0034509631
-
Crystal structure of the spliceosomal 15.5kD protein bound to a U4 snRNA fragment
-
Vidovic, I., S. Nottrott, K. Hartmuth, R. Luhrmann, and R. Ficner. 2000. Crystal structure of the spliceosomal 15.5kD protein bound to a U4 snRNA fragment. Mol. Cell 6:1331-1342.
-
(2000)
Mol. Cell
, vol.6
, pp. 1331-1342
-
-
Vidovic, I.1
Nottrott, S.2
Hartmuth, K.3
Luhrmann, R.4
Ficner, R.5
-
69
-
-
0034721649
-
A common core RNP structure shared between the small nucleolar box C/D RNPs and the spliceosomal U4 snRNP
-
Watkins, N. J., V. Segault, B. Charpentier, S. Nottrott, P. Fabrizio, A. Bachi, M. Wilm, M. Rosbash, C. Branlant, and R. Luhrmann. 2000. A common core RNP structure shared between the small nucleolar box C/D RNPs and the spliceosomal U4 snRNP. Cell 103:457-466.
-
(2000)
Cell
, vol.103
, pp. 457-466
-
-
Watkins, N.J.1
Segault, V.2
Charpentier, B.3
Nottrott, S.4
Fabrizio, P.5
Bachi, A.6
Wilm, M.7
Rosbash, M.8
Branlant, C.9
Luhrmann, R.10
-
70
-
-
0036889385
-
Conserved stem II of the box C/D motif is essential for nucleolar localization and is required, along with the 15.5K protein, for the hierarchical assembly of the box C/D snoRNP
-
Watkins, N. J., A. Dickmanns, and R. Luhrmann. 2002. Conserved stem II of the box C/D motif is essential for nucleolar localization and is required, along with the 15.5K protein, for the hierarchical assembly of the box C/D snoRNP. Mol. Cell. Biol. 22:8342-8352.
-
(2002)
Mol. Cell. Biol
, vol.22
, pp. 8342-8352
-
-
Watkins, N.J.1
Dickmanns, A.2
Luhrmann, R.3
-
71
-
-
9744222917
-
Assembly and maturation of the U3 snoRNP in the nudeoplasm in a large dynamic multiprotein complex
-
Watkins, N. J., I. Lemm, D. Ingelfinger, C. Schneider, M. Hossbach, H. Urlaub, and R. Luhrmann. 2004. Assembly and maturation of the U3 snoRNP in the nudeoplasm in a large dynamic multiprotein complex. Mol. Cell 16:789-798.
-
(2004)
Mol. Cell
, vol.16
, pp. 789-798
-
-
Watkins, N.J.1
Lemm, I.2
Ingelfinger, D.3
Schneider, C.4
Hossbach, M.5
Urlaub, H.6
Luhrmann, R.7
-
72
-
-
0034699518
-
Structure of the 30S ribosomal subunit
-
Wimberly, B. T., D. E. Brodersen, W. M. Clemons, Jr., R. J. Morgan-Warren, A. P. Carter, C. Vonrhein, T. Hartsch, and V. Ramakrishnan. 2000. Structure of the 30S ribosomal subunit. Nature 407:327-339.
-
(2000)
Nature
, vol.407
, pp. 327-339
-
-
Wimberly, B.T.1
Brodersen, D.E.2
Clemons Jr., W.M.3
Morgan-Warren, R.J.4
Carter, A.P.5
Vonrhein, C.6
Hartsch, T.7
Ramakrishnan, V.8
-
73
-
-
25844527373
-
Detecting protein-induced folding of the U4 snRNA kink-turn by single-molecule multiparameter fluorescent resonance energy transfer measurements
-
Wozniak, A. K., S. Nottrott, E. Kuhn-Holsken, G. F. Schroder, H. Grubmuller, R. Luhrmann, C. A. Seidel, and F. Oesterhelt. 2005. Detecting protein-induced folding of the U4 snRNA kink-turn by single-molecule multiparameter fluorescent resonance energy transfer measurements. RNA 11:1545-1554.
-
(2005)
RNA
, vol.11
, pp. 1545-1554
-
-
Wozniak, A.K.1
Nottrott, S.2
Kuhn-Holsken, E.3
Schroder, G.F.4
Grubmuller, H.5
Luhrmann, R.6
Seidel, C.A.7
Oesterhelt, F.8
|