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Volumn 27, Issue 4, 2007, Pages 1191-1206

Analysis of sequence and structural features that identify the B/C motif of U3 small nucleolar RNA as the recognition site for the Snu13p-Rrp9p protein pair

Author keywords

[No Author keywords available]

Indexed keywords

CELL PROTEIN; PROTEIN NOP1P; PROTEIN NOP56P; PROTEIN NOP58P; PROTEIN RRP9P; PROTEIN SNU13P; PROTEIN SNU13P RRP9P; SMALL NUCLEAR RIBONUCLEOPROTEIN; SMALL NUCLEAR RNA; SMALL NUCLEOLAR RNA; SMALL NUCLEOLAR RNA U3; UNCLASSIFIED DRUG;

EID: 33846907471     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/MCB.01287-06     Document Type: Article
Times cited : (25)

References (73)
  • 1
    • 0036794074 scopus 로고    scopus 로고
    • The SBP2 and 15.5 kD/Snu13p proteins share the same RNA binding domain: Identification of SBP2 amino acids important to SECIS RNA binding
    • Allmang, C., P. Carbon, and A. Krol. 2002. The SBP2 and 15.5 kD/Snu13p proteins share the same RNA binding domain: identification of SBP2 amino acids important to SECIS RNA binding. RNA 8:1308-1318.
    • (2002) RNA , vol.8 , pp. 1308-1318
    • Allmang, C.1    Carbon, P.2    Krol, A.3
  • 3
    • 0034637111 scopus 로고    scopus 로고
    • The complete atomic structure of the large ribosomal subunit at 2.4 Å resolution
    • Ban, N., P. Nissen, J. Hansen, P. B. Moore, and T. A. Steitz. 2000. The complete atomic structure of the large ribosomal subunit at 2.4 Å resolution. Science 289:905-920.
    • (2000) Science , vol.289 , pp. 905-920
    • Ban, N.1    Nissen, P.2    Hansen, J.3    Moore, P.B.4    Steitz, T.A.5
  • 4
    • 77957219751 scopus 로고
    • Mutational analysis of an essential binding site for the U3 snoRNA in the 5′ external transcribed spacer of yeast pre-rRNA
    • Beltrame, M., Y. Henry, and D. Tollervey. 1994. Mutational analysis of an essential binding site for the U3 snoRNA in the 5′ external transcribed spacer of yeast pre-rRNA. Nucleic Acids Res. 22:5139-5147.
    • (1994) Nucleic Acids Res , vol.22 , pp. 5139-5147
    • Beltrame, M.1    Henry, Y.2    Tollervey, D.3
  • 5
    • 0029093602 scopus 로고
    • Base pairing between U3 and the pre-ribosomal RNA is required for 18S rRNA synthesis
    • Beltrame, M., and D. Tollervey. 1995. Base pairing between U3 and the pre-ribosomal RNA is required for 18S rRNA synthesis. EMBO J. 14:4350-4356.
    • (1995) EMBO J , vol.14 , pp. 4350-4356
    • Beltrame, M.1    Tollervey, D.2
  • 6
    • 0028302637 scopus 로고
    • Synthetic lethality with fibrillarin identifies NOP77p, a nucleolar protein required for prerRNA processing and modification
    • Berges, T., E. Petfalski, D. Tollervey, and E. C. Hurt. 1994. Synthetic lethality with fibrillarin identifies NOP77p, a nucleolar protein required for prerRNA processing and modification. EMBO J. 13:3136-3148.
    • (1994) EMBO J , vol.13 , pp. 3136-3148
    • Berges, T.1    Petfalski, E.2    Tollervey, D.3    Hurt, E.C.4
  • 7
    • 0033548450 scopus 로고    scopus 로고
    • U3 small nucleolar RNA is essential for cleavage at sites 1, 2 and 3 in pre-rRNA and determines which rRNA processing pathway is taken in Xenopus oocytes
    • Borovjagin, A. V., and S. A. Gerbi. 1999. U3 small nucleolar RNA is essential for cleavage at sites 1, 2 and 3 in pre-rRNA and determines which rRNA processing pathway is taken in Xenopus oocytes. J. Mol. Biol. 286:1347-1363.
    • (1999) J. Mol. Biol , vol.286 , pp. 1347-1363
    • Borovjagin, A.V.1    Gerbi, S.A.2
  • 8
    • 0035726287 scopus 로고    scopus 로고
    • Xenopus U3 snoRNA GAC-Box A′ and Box A sequences play distinct functional roles in rRNA processing
    • Borovjagin, A. V., and S. A. Gerbi. 2001. Xenopus U3 snoRNA GAC-Box A′ and Box A sequences play distinct functional roles in rRNA processing. Mol. Cell. Biol. 21:6210-6221.
    • (2001) Mol. Cell. Biol , vol.21 , pp. 6210-6221
    • Borovjagin, A.V.1    Gerbi, S.A.2
  • 9
    • 2442670274 scopus 로고    scopus 로고
    • Xenopus U3 snoRNA docks on pre-rRNA through a novel base-pairing interaction
    • Borovjagin, A. V., and S. A. Gerbi. 2004. Xenopus U3 snoRNA docks on pre-rRNA through a novel base-pairing interaction. RNA 10:942-953.
    • (2004) RNA , vol.10 , pp. 942-953
    • Borovjagin, A.V.1    Gerbi, S.A.2
  • 10
    • 24744441329 scopus 로고    scopus 로고
    • An evolutionary intra-molecular shift in the preferred U3 snoRNA binding site on pre-ribosomal RNA
    • Borovjagin, A. V., and S. A. Gerbi. 2005. An evolutionary intra-molecular shift in the preferred U3 snoRNA binding site on pre-ribosomal RNA. Nucleic Acids Res. 33:4995-5005.
    • (2005) Nucleic Acids Res , vol.33 , pp. 4995-5005
    • Borovjagin, A.V.1    Gerbi, S.A.2
  • 11
    • 0037099680 scopus 로고    scopus 로고
    • Site-specific cross-linking analyses reveal an asymmetric protein distribution for a box C/D snoRNP
    • Cahill, N. M., K. Friend, W. Speckmann, Z. H. Li, R. M. Terns, M. P. Terns, and J. A. Steitz. 2002. Site-specific cross-linking analyses reveal an asymmetric protein distribution for a box C/D snoRNP. EMBO J. 21:3816-3828.
    • (2002) EMBO J , vol.21 , pp. 3816-3828
    • Cahill, N.M.1    Friend, K.2    Speckmann, W.3    Li, Z.H.4    Terns, R.M.5    Terns, M.P.6    Steitz, J.A.7
  • 12
    • 3142608984 scopus 로고    scopus 로고
    • Joint X-ray and NMR refinement of the yeast L30e-mRNA complex
    • Chao, J. A., and J. R. Williamson. 2004. Joint X-ray and NMR refinement of the yeast L30e-mRNA complex. Structure 12:1165-1176.
    • (2004) Structure , vol.12 , pp. 1165-1176
    • Chao, J.A.1    Williamson, J.R.2
  • 13
    • 20144374350 scopus 로고    scopus 로고
    • Reconstitution of archaeal H/ACA small ribonucleoprotein complexes active in pseudouridylation
    • Charpentier, B., S. Muller, and C. Branlant. 2005. Reconstitution of archaeal H/ACA small ribonucleoprotein complexes active in pseudouridylation. Nucleic Acids Res. 33:3133-3144.
    • (2005) Nucleic Acids Res , vol.33 , pp. 3133-3144
    • Charpentier, B.1    Muller, S.2    Branlant, C.3
  • 14
    • 4444326475 scopus 로고    scopus 로고
    • The archaeal sRNA binding protein L7Ae has a 3D structure very similar to that of its eukaryal counterpart while having a broader RNA-binding specificity
    • Charron, C., X. Manival, A. Clery, V. Senty-Segault, B. Charpentier, N. Mannier-Gourrier, C. Branlant, and A. Aubry. 2004. The archaeal sRNA binding protein L7Ae has a 3D structure very similar to that of its eukaryal counterpart while having a broader RNA-binding specificity. J. Mol. Biol. 342:757-773.
    • (2004) J. Mol. Biol , vol.342 , pp. 757-773
    • Charron, C.1    Manival, X.2    Clery, A.3    Senty-Segault, V.4    Charpentier, B.5    Mannier-Gourrier, N.6    Branlant, C.7    Aubry, A.8
  • 15
    • 12844270442 scopus 로고    scopus 로고
    • The snRNP 15.5K protein folds its cognate K-turn RNA: A combined theoretical and biochemical study
    • Cojocaru, V., S. Nottrott, R. Klement, and T. M. Jovin. 2005. The snRNP 15.5K protein folds its cognate K-turn RNA: a combined theoretical and biochemical study. RNA 11:197-209.
    • (2005) RNA , vol.11 , pp. 197-209
    • Cojocaru, V.1    Nottrott, S.2    Klement, R.3    Jovin, T.M.4
  • 16
    • 0036629250 scopus 로고    scopus 로고
    • rRNA modifications and ribosome function
    • Decatur, W. A., and M. J. Fournier. 2002. rRNA modifications and ribosome function. Trends Biochem. Sci. 27:344-351.
    • (2002) Trends Biochem. Sci , vol.27 , pp. 344-351
    • Decatur, W.A.1    Fournier, M.J.2
  • 17
    • 1642458391 scopus 로고    scopus 로고
    • Analysis of Snu13p mutations reveals differential interactions with the U4 snRNA and U3 snoRNA
    • Dobbyn, H. C., and R. T. O'Keefe. 2004. Analysis of Snu13p mutations reveals differential interactions with the U4 snRNA and U3 snoRNA. RNA 10:308-320.
    • (2004) RNA , vol.10 , pp. 308-320
    • Dobbyn, H.C.1    O'Keefe, R.T.2
  • 19
    • 0037073729 scopus 로고    scopus 로고
    • The hU3-55K protein requires 15.5K binding to the box B/C motif as well as flanking RNA elements for its association with the U3 small nucleolar RNA in vitro
    • Granneman, S., G. J. Pruijn, W. Horstman, W. J. van Venrooiy, R. Luhrmann, and N. J. Watkins. 2002. The hU3-55K protein requires 15.5K binding to the box B/C motif as well as flanking RNA elements for its association with the U3 small nucleolar RNA in vitro. J. Biol. Chem. 277:48490-48500.
    • (2002) J. Biol. Chem , vol.277 , pp. 48490-48500
    • Granneman, S.1    Pruijn, G.J.2    Horstman, W.3    van Venrooiy, W.J.4    Luhrmann, R.5    Watkins, N.J.6
  • 20
    • 2142754126 scopus 로고    scopus 로고
    • Ribosome biogenesis: Of knobs and RNA processing
    • Granneman, S., and S. J. Baserga. 2004. Ribosome biogenesis: of knobs and RNA processing. Exp. Cell Res. 296:43-50.
    • (2004) Exp. Cell Res , vol.296 , pp. 43-50
    • Granneman, S.1    Baserga, S.J.2
  • 21
    • 2342638215 scopus 로고    scopus 로고
    • Structure of protein L7Ae bound to a K-turn derived from an archaeal box H/ACA sRNA at 1.8 Å resolution
    • Hamma, T., and A. R. Ferre-D'Amare. 2004. Structure of protein L7Ae bound to a K-turn derived from an archaeal box H/ACA sRNA at 1.8 Å resolution. Structure 12:893-903.
    • (2004) Structure , vol.12 , pp. 893-903
    • Hamma, T.1    Ferre-D'Amare, A.R.2
  • 23
    • 0025932166 scopus 로고    scopus 로고
    • Hughes, J. M., and M. Ares, Jr. 1991. Depletion of U3 small nucleolar RNA inhibits cleavage in the 5′ external transcribed spacer of yeast pre-ribosomal RNA and impairs formation of 18S ribosomal RNA. EMBO J.10:4231-4239.
    • Hughes, J. M., and M. Ares, Jr. 1991. Depletion of U3 small nucleolar RNA inhibits cleavage in the 5′ external transcribed spacer of yeast pre-ribosomal RNA and impairs formation of 18S ribosomal RNA. EMBO J.10:4231-4239.
  • 24
    • 0035798607 scopus 로고    scopus 로고
    • A second exon splicing silencer within human immunodeficiency virus type 1 tat exon 2 represses splicing of Tat mRNA and binds protein hnRNP H
    • Jacquenet, S., A. Mereau, P. S. Bilodeau, L. Damier, C. M. Stoltzfus, and C. Branlant. 2001. A second exon splicing silencer within human immunodeficiency virus type 1 tat exon 2 represses splicing of Tat mRNA and binds protein hnRNP H. J. Biol. Chem. 276:40464-40475.
    • (2001) J. Biol. Chem , vol.276 , pp. 40464-40475
    • Jacquenet, S.1    Mereau, A.2    Bilodeau, P.S.3    Damier, L.4    Stoltzfus, C.M.5    Branlant, C.6
  • 25
    • 0345005029 scopus 로고
    • Improved predictions of secondary structures for RNA
    • Jaeger, J. A., D. H. Turner, and M. Zuker. 1989. Improved predictions of secondary structures for RNA. Proc. Natl. Acad. Sci. USA 86:7706-7710.
    • (1989) Proc. Natl. Acad. Sci. USA , vol.86 , pp. 7706-7710
    • Jaeger, J.A.1    Turner, D.H.2    Zuker, M.3
  • 26
    • 0024296524 scopus 로고
    • Nucleotide sequence determination and secondary structure of Xenopus U3 snRNA
    • Jeppesen, C., B. Stebbins-Boaz, and S. A. Gerbi. 1988. Nucleotide sequence determination and secondary structure of Xenopus U3 snRNA. Nucleic Acids Res. 16:2127-2148.
    • (1988) Nucleic Acids Res , vol.16 , pp. 2127-2148
    • Jeppesen, C.1    Stebbins-Boaz, B.2    Gerbi, S.A.3
  • 27
    • 0025276512 scopus 로고
    • The U3 small nucleolar ribonucleoprotein functions in the first step of preribosomal RNA processing
    • Kass, S., K. Tyc, J. A. Steitz, and B. Sollner-Webb. 1990. The U3 small nucleolar ribonucleoprotein functions in the first step of preribosomal RNA processing. Cell 60:897-908.
    • (1990) Cell , vol.60 , pp. 897-908
    • Kass, S.1    Tyc, K.2    Steitz, J.A.3    Sollner-Webb, B.4
  • 28
    • 0035898634 scopus 로고    scopus 로고
    • Small nucleolar RNA-guided post-transcriptional modification of cellular RNAs
    • Kiss, T. 2001. Small nucleolar RNA-guided post-transcriptional modification of cellular RNAs. EMBO J. 20:3617-3622.
    • (2001) EMBO J , vol.20 , pp. 3617-3622
    • Kiss, T.1
  • 29
    • 0035423087 scopus 로고    scopus 로고
    • The kink-turn: A new RNA secondary structure motif
    • Klein, D. J., T. M. Schmeing, P. B. Moore, and T. A. Steitz. 2001. The kink-turn: a new RNA secondary structure motif. EMBO J. 20:4214-4221.
    • (2001) EMBO J , vol.20 , pp. 4214-4221
    • Klein, D.J.1    Schmeing, T.M.2    Moore, P.B.3    Steitz, T.A.4
  • 30
    • 0028225137 scopus 로고
    • A novel RNA-binding motif in omnipotent suppressors of translation termination, ribosomal proteins and a ribosome modification enzyme?
    • Koonin, E. V., P. Bork, and C. Sander. 1994. A novel RNA-binding motif in omnipotent suppressors of translation termination, ribosomal proteins and a ribosome modification enzyme? Nucleic Acids Res. 22:2166-2167.
    • (1994) Nucleic Acids Res , vol.22 , pp. 2166-2167
    • Koonin, E.V.1    Bork, P.2    Sander, C.3
  • 31
    • 0033509092 scopus 로고    scopus 로고
    • Protein trans-acting factors involved in ribosome biogenesis in Saccharomyces cerevisiae
    • Kressler, D., P. Linder, and J. de La Cruz. 1999. Protein trans-acting factors involved in ribosome biogenesis in Saccharomyces cerevisiae. Mol. Cell. Biol. 19:7897-7912.
    • (1999) Mol. Cell. Biol , vol.19 , pp. 7897-7912
    • Kressler, D.1    Linder, P.2    de La Cruz, J.3
  • 32
    • 0037082424 scopus 로고    scopus 로고
    • Archaeal ribosomal protein L7 is a functional homolog of the eukaryotic 15.5kD/Snu13p snoRNP core protein
    • Kuhn, J. F., E. J. Tran, and E. S. Maxwell. 2002. Archaeal ribosomal protein L7 is a functional homolog of the eukaryotic 15.5kD/Snu13p snoRNP core protein. Nucleic Acids Res. 30:931-941.
    • (2002) Nucleic Acids Res , vol.30 , pp. 931-941
    • Kuhn, J.F.1    Tran, E.J.2    Maxwell, E.S.3
  • 33
    • 0030614970 scopus 로고    scopus 로고
    • RNA apatamers for yeast ribosomal protein L32 have a conserved purine-rich internal loop
    • Li, H., and S. A. White. 1997. RNA apatamers for yeast ribosomal protein L32 have a conserved purine-rich internal loop. RNA 3:245-254.
    • (1997) RNA , vol.3 , pp. 245-254
    • Li, H.1    White, S.A.2
  • 34
    • 0027500884 scopus 로고
    • Isolation of U3 snoRNP from CHO cells: A novel 55-kDa protein binds to the central part of U3 snoRNA
    • Lubben, B., C. Marshallsay, N. Rottmann, and R. Luhrmann. 1993. Isolation of U3 snoRNP from CHO cells: a novel 55-kDa protein binds to the central part of U3 snoRNA. Nucleic Acids Res. 21:5377-5385.
    • (1993) Nucleic Acids Res , vol.21 , pp. 5377-5385
    • Lubben, B.1    Marshallsay, C.2    Rottmann, N.3    Luhrmann, R.4
  • 36
    • 0028244439 scopus 로고
    • The POP1 gene encodes a protein component common to the RNase MRP and RNase P ribonucleoproteins
    • Lygerou, Z., P. Mitchell, E. Petfalski, B. Seraphin, and D. Tollervey. 1994. The POP1 gene encodes a protein component common to the RNase MRP and RNase P ribonucleoproteins. Genes Dev. 8:1423-1433.
    • (1994) Genes Dev , vol.8 , pp. 1423-1433
    • Lygerou, Z.1    Mitchell, P.2    Petfalski, E.3    Seraphin, B.4    Tollervey, D.5
  • 37
    • 0032710024 scopus 로고    scopus 로고
    • A novel loop-loop recognition motif in the yeast ribosomal protein L30 autoregulatory RNA complex
    • Mao, H., S. A. White, and J. R. Williamson. 1999. A novel loop-loop recognition motif in the yeast ribosomal protein L30 autoregulatory RNA complex. Nat. Struct. Biol 6:1139-1147.
    • (1999) Nat. Struct. Biol , vol.6 , pp. 1139-1147
    • Mao, H.1    White, S.A.2    Williamson, J.R.3
  • 40
    • 0031592930 scopus 로고    scopus 로고
    • An in vivo and in vitro structure-function analysis of the Saccharomyces cerevisiae U3A snoRNP: Protein-RNA contacts and base-pair interaction with the pre-ribosomal RNA
    • Mereau, A., R. Fournier, A. Gregoire, A. Mougin, P. Fabrizio, R. Luhrmann, and C. Branlant. 1997. An in vivo and in vitro structure-function analysis of the Saccharomyces cerevisiae U3A snoRNP: protein-RNA contacts and base-pair interaction with the pre-ribosomal RNA. J. Mol. Biol. 273:552-571.
    • (1997) J. Mol. Biol , vol.273 , pp. 552-571
    • Mereau, A.1    Fournier, R.2    Gregoire, A.3    Mougin, A.4    Fabrizio, P.5    Luhrmann, R.6    Branlant, C.7
  • 41
    • 2342475659 scopus 로고    scopus 로고
    • Molecular basis of box C/D RNA-protein interactions: Cocrystal structure of archaeal L7Ae and a box C/D RNA
    • Moore, T., Y. Zhang, M. O. Fenley, and H. Li. 2004. Molecular basis of box C/D RNA-protein interactions: cocrystal structure of archaeal L7Ae and a box C/D RNA. Structure 12:807-818.
    • (2004) Structure , vol.12 , pp. 807-818
    • Moore, T.1    Zhang, Y.2    Fenley, M.O.3    Li, H.4
  • 42
    • 0027447757 scopus 로고
    • Yeast snR30 is a small nucleolar RNA required for 18S rRNA synthesis
    • Morrissey, J. P., and D. Tollervey. 1993. Yeast snR30 is a small nucleolar RNA required for 18S rRNA synthesis. Mol. Cell. Biol. 13:2469-2477.
    • (1993) Mol. Cell. Biol , vol.13 , pp. 2469-2477
    • Morrissey, J.P.1    Tollervey, D.2
  • 43
    • 0029973545 scopus 로고    scopus 로고
    • Secondary structure of the yeast Saccharomyces cerevisiae pre-U3A snoRNA and its implication for splicing efficiency
    • Mougin, A., A. Gregoire, J. Banroques, V. Segault, R. Fournier, F. Brule, M. Chevrier-Miller, and C. Branlant. 1996. Secondary structure of the yeast Saccharomyces cerevisiae pre-U3A snoRNA and its implication for splicing efficiency. RNA 2:1079-1093.
    • (1996) RNA , vol.2 , pp. 1079-1093
    • Mougin, A.1    Gregoire, A.2    Banroques, J.3    Segault, V.4    Fournier, R.5    Brule, F.6    Chevrier-Miller, M.7    Branlant, C.8
  • 44
    • 0036297657 scopus 로고    scopus 로고
    • Direct probing of RNA structure and RNA-protein interactions in purified HeLa cell's and yeast spliceosomal U4/U6U5 tri-snRNP particles
    • Mougin, A., A. Gottschalk, P. Fabrizio, R. Luhrmann, and C. Branlant. 2002. Direct probing of RNA structure and RNA-protein interactions in purified HeLa cell's and yeast spliceosomal U4/U6U5 tri-snRNP particles. J. Mol. Biol. 317:631-649.
    • (2002) J. Mol. Biol , vol.317 , pp. 631-649
    • Mougin, A.1    Gottschalk, A.2    Fabrizio, P.3    Luhrmann, R.4    Branlant, C.5
  • 45
    • 18644372079 scopus 로고    scopus 로고
    • 60S pre-ribosome formation viewed from assembly in the nucleolus until export to the cytoplasm
    • Nissan, T. A., J. Bassler, E. Petfalski, D. Tollervey, and E. Hurt. 2002. 60S pre-ribosome formation viewed from assembly in the nucleolus until export to the cytoplasm. EMBO J. 21:5539-5547.
    • (2002) EMBO J , vol.21 , pp. 5539-5547
    • Nissan, T.A.1    Bassler, J.2    Petfalski, E.3    Tollervey, D.4    Hurt, E.5
  • 46
    • 29144449192 scopus 로고    scopus 로고
    • The K-loop, a general feature of the Pyrococcus C/D guide RNAs, is an RNA structural motif related to the K-turn
    • Nolivos, S., A. J. Carpousis, and B. Clouet-d'Orval. 2005. The K-loop, a general feature of the Pyrococcus C/D guide RNAs, is an RNA structural motif related to the K-turn. Nucleic Acids Res. 33:6507-6514.
    • (2005) Nucleic Acids Res , vol.33 , pp. 6507-6514
    • Nolivos, S.1    Carpousis, A.J.2    Clouet-d'Orval, B.3
  • 47
    • 0033229873 scopus 로고    scopus 로고
    • Functional interaction of a novel 15.5kD [U4/U6.U5] tri-snRNP protein with the 5′ stem-loop of U4 snRNA
    • Nottrott, S., K. Hartmuth, P. Fabrizio, H. Urlaub, I. Vidovic, R. Ficner, and R. Luhrmann. 1999. Functional interaction of a novel 15.5kD [U4/U6.U5] tri-snRNP protein with the 5′ stem-loop of U4 snRNA. EMBO J. 18:6119-6133.
    • (1999) EMBO J , vol.18 , pp. 6119-6133
    • Nottrott, S.1    Hartmuth, K.2    Fabrizio, P.3    Urlaub, H.4    Vidovic, I.5    Ficner, R.6    Luhrmann, R.7
  • 48
    • 0037107418 scopus 로고    scopus 로고
    • Hierarchical, clustered protein interactions with U4/U6 snRNA: A biochemical role for U4/U6 proteins
    • Nottrott, S., H. Urlaub, and R. Luhrmann. 2002. Hierarchical, clustered protein interactions with U4/U6 snRNA: a biochemical role for U4/U6 proteins. EMBO J. 21:5527-5538.
    • (2002) EMBO J , vol.21 , pp. 5527-5538
    • Nottrott, S.1    Urlaub, H.2    Luhrmann, R.3
  • 49
    • 0037117533 scopus 로고    scopus 로고
    • In vitro reconstitution and activity of a C/D box methylation guide ribonucleoprotein complex
    • Omer, A. D., S. Ziesche, H. Ebhardt, and P. P. Dennis. 2002. In vitro reconstitution and activity of a C/D box methylation guide ribonucleoprotein complex. Proc. Natl. Acad. Sci. USA 99:5289-5294.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 5289-5294
    • Omer, A.D.1    Ziesche, S.2    Ebhardt, H.3    Dennis, P.P.4
  • 50
    • 20544468675 scopus 로고    scopus 로고
    • Structural comparison of yeast snoRNP and spliceosomal protein Snu13p with its homologs
    • Oruganti, S., Y. Zhang, and H. Li. 2005. Structural comparison of yeast snoRNP and spliceosomal protein Snu13p with its homologs. Biochem. Biophys. Res. Commun. 333:550-554.
    • (2005) Biochem. Biophys. Res. Commun , vol.333 , pp. 550-554
    • Oruganti, S.1    Zhang, Y.2    Li, H.3
  • 51
    • 0023395345 scopus 로고
    • Structural analysis of the human U3 ribonucleoprotein particle reveal a conserved sequence available for base pairing with pre-rRNA
    • Parker, K. A., and J. A. Steitz. 1987. Structural analysis of the human U3 ribonucleoprotein particle reveal a conserved sequence available for base pairing with pre-rRNA. Mol. Cell. Biol. 7:2899-2913.
    • (1987) Mol. Cell. Biol , vol.7 , pp. 2899-2913
    • Parker, K.A.1    Steitz, J.A.2
  • 52
    • 0031982809 scopus 로고    scopus 로고
    • cDNA cloning and characterization of the human U3 small nucleolar ribonucleo-protein complex-associated 55-kilodalton protein
    • Pluk, H., J. Soffner, R. Luhrmann, and W. J. van Venrooij. 1998. cDNA cloning and characterization of the human U3 small nucleolar ribonucleo-protein complex-associated 55-kilodalton protein. Mol. Cell. Biol. 18:488-498.
    • (1998) Mol. Cell. Biol , vol.18 , pp. 488-498
    • Pluk, H.1    Soffner, J.2    Luhrmann, R.3    van Venrooij, W.J.4
  • 53
    • 0037324527 scopus 로고    scopus 로고
    • Binding of L7Ae protein to the K-turn of archaeal snoRNAs: A shared RNA binding motif for C/D and H/ACA box snoRNAs in Archaea
    • Rozhdestvensky, T. S., T. H. Tang, I. V. Tchirkova, J. Brosius, J. P. Bachellerie, and A. Huttenhofer. 2003. Binding of L7Ae protein to the K-turn of archaeal snoRNAs: a shared RNA binding motif for C/D and H/ACA box snoRNAs in Archaea. Nucleic Acids Res. 31:869-877.
    • (2003) Nucleic Acids Res , vol.31 , pp. 869-877
    • Rozhdestvensky, T.S.1    Tang, T.H.2    Tchirkova, I.V.3    Brosius, J.4    Bachellerie, J.P.5    Huttenhofer, A.6
  • 54
    • 0031816004 scopus 로고    scopus 로고
    • Functional mapping of the U3 small nucleolar RNA from the yeast Saccharomyces cerevisiae
    • Samarsky, D. A., and M. J. Fournier. 1998. Functional mapping of the U3 small nucleolar RNA from the yeast Saccharomyces cerevisiae. Mol. Cell. Biol. 18:3431-3444.
    • (1998) Mol. Cell. Biol , vol.18 , pp. 3431-3444
    • Samarsky, D.A.1    Fournier, M.J.2
  • 56
    • 33748778456 scopus 로고    scopus 로고
    • RNA structural requirements for the association of the spliceosomal hPrp31 protein with the U4 and U4atac small nuclear ribonucleoproteins
    • Schultz, A., S. Nottrott, K. Hartmuth, and R. Luhrmann. 2006. RNA structural requirements for the association of the spliceosomal hPrp31 protein with the U4 and U4atac small nuclear ribonucleoproteins. J. Biol. Chem. 281:28278-28286.
    • (2006) J. Biol. Chem , vol.281 , pp. 28278-28286
    • Schultz, A.1    Nottrott, S.2    Hartmuth, K.3    Luhrmann, R.4
  • 57
    • 33745477012 scopus 로고    scopus 로고
    • Protein-protein and protein-RNA contacts both contribute to the 15.5K-mediated assembly of the U4/U6 snRNP and the box C/D snoRNPs
    • Schultz, A., S. Nottrott, N. J. Watkins, and R. Luhrmann. 2006. Protein-protein and protein-RNA contacts both contribute to the 15.5K-mediated assembly of the U4/U6 snRNP and the box C/D snoRNPs. Mol. Cell. Biol. 26:5146-5154.
    • (2006) Mol. Cell. Biol , vol.26 , pp. 5146-5154
    • Schultz, A.1    Nottrott, S.2    Watkins, N.J.3    Luhrmann, R.4
  • 58
    • 0026652896 scopus 로고
    • An experimental study of Saccharomyces cerevisiae U3 snRNA conformation in solution
    • Segault, V., A. Mougin, A. Gregoire, J. Banroques, and C. Branlant. 1992. An experimental study of Saccharomyces cerevisiae U3 snRNA conformation in solution. Nucleic Acids Res. 20:3443-3451.
    • (1992) Nucleic Acids Res , vol.20 , pp. 3443-3451
    • Segault, V.1    Mougin, A.2    Gregoire, A.3    Banroques, J.4    Branlant, C.5
  • 59
    • 0032771416 scopus 로고    scopus 로고
    • Base pairing between U3 small nucleolar RNA and the 5′ end of 18S rRNA is required for pre-rRNA processing
    • Sharma, K., and D. Tollervey. 1999. Base pairing between U3 small nucleolar RNA and the 5′ end of 18S rRNA is required for pre-rRNA processing. Mol. Cell. Biol. 19:6012-6019.
    • (1999) Mol. Cell. Biol , vol.19 , pp. 6012-6019
    • Sharma, K.1    Tollervey, D.2
  • 60
    • 0033595016 scopus 로고    scopus 로고
    • Purification of the yeast U4/U6.U5 small nuclear ribonucleoprotein particle and identification of its proteins
    • Stevens, S. W., and J. Abelson. 1999. Purification of the yeast U4/U6.U5 small nuclear ribonucleoprotein particle and identification of its proteins. Proc. Natl. Acad. Sci. USA 96:7226-7231.
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 7226-7231
    • Stevens, S.W.1    Abelson, J.2
  • 61
    • 24044431940 scopus 로고    scopus 로고
    • Molecular basis for RNA kink-turn recognition by the h15.5K small RNP protein
    • Szewczak, L. B., J. S. Gabrielsen, S. J. Degregorio, S. A. Strobel, and J. A. Steitz. 2005. Molecular basis for RNA kink-turn recognition by the h15.5K small RNP protein. RNA 11:1407-1419.
    • (2005) RNA , vol.11 , pp. 1407-1419
    • Szewczak, L.B.1    Gabrielsen, J.S.2    Degregorio, S.J.3    Strobel, S.A.4    Steitz, J.A.5
  • 62
    • 0036176517 scopus 로고    scopus 로고
    • Small nucleolar RNAs: Versatile trans-acting molecules of ancient evolutionary origin
    • Terns, M. P., and R. M. Terns. 2002. Small nucleolar RNAs: versatile trans-acting molecules of ancient evolutionary origin. Gene Expr. 10:17-39.
    • (2002) Gene Expr , vol.10 , pp. 17-39
    • Terns, M.P.1    Terns, R.M.2
  • 63
    • 22244483207 scopus 로고    scopus 로고
    • Induced fit of RNA on binding the L7Ae protein to the kink-turn motif
    • Turner, B., S. E. Melcher, T. J. Wilson, D. G. Norman, and D. M. Lilley. 2005. Induced fit of RNA on binding the L7Ae protein to the kink-turn motif. RNA 11:1192-1200.
    • (2005) RNA , vol.11 , pp. 1192-1200
    • Turner, B.1    Melcher, S.E.2    Wilson, T.J.3    Norman, D.G.4    Lilley, D.M.5
  • 64
    • 0026783010 scopus 로고
    • A new interaction between the mouse 5′ external transcribed spacer of pre-rRNA and U3 snRNA detected by psoralen crosslinking
    • Tyc, K., and J. A. Steitz. 1992. A new interaction between the mouse 5′ external transcribed spacer of pre-rRNA and U3 snRNA detected by psoralen crosslinking. Nucleic Acids Res. 20:5375-5382.
    • (1992) Nucleic Acids Res , vol.20 , pp. 5375-5382
    • Tyc, K.1    Steitz, J.A.2
  • 65
    • 0033367325 scopus 로고    scopus 로고
    • Ribosome synthesis in Saccharomyces cerevisiae
    • Venema, J., and D. Tollervey. 1999. Ribosome synthesis in Saccharomyces cerevisiae. Annu. Rev. Genet. 33:261-311.
    • (1999) Annu. Rev. Genet , vol.33 , pp. 261-311
    • Venema, J.1    Tollervey, D.2
  • 66
    • 0033730378 scopus 로고    scopus 로고
    • Yeast Rrp9p is an evolutionarily conserved U3 snoRNP protein essential for early pre-rRNA processing cleavages and requires box C for its association
    • Venema, J., H. R. Vos, A. W. Faber, W. J. van Venroovj, and H. A. Raue. 2000. Yeast Rrp9p is an evolutionarily conserved U3 snoRNP protein essential for early pre-rRNA processing cleavages and requires box C for its association. RNA 6:1660-1671.
    • (2000) RNA , vol.6 , pp. 1660-1671
    • Venema, J.1    Vos, H.R.2    Faber, A.W.3    van Venroovj, W.J.4    Raue, H.A.5
  • 68
    • 0034509631 scopus 로고    scopus 로고
    • Crystal structure of the spliceosomal 15.5kD protein bound to a U4 snRNA fragment
    • Vidovic, I., S. Nottrott, K. Hartmuth, R. Luhrmann, and R. Ficner. 2000. Crystal structure of the spliceosomal 15.5kD protein bound to a U4 snRNA fragment. Mol. Cell 6:1331-1342.
    • (2000) Mol. Cell , vol.6 , pp. 1331-1342
    • Vidovic, I.1    Nottrott, S.2    Hartmuth, K.3    Luhrmann, R.4    Ficner, R.5
  • 70
    • 0036889385 scopus 로고    scopus 로고
    • Conserved stem II of the box C/D motif is essential for nucleolar localization and is required, along with the 15.5K protein, for the hierarchical assembly of the box C/D snoRNP
    • Watkins, N. J., A. Dickmanns, and R. Luhrmann. 2002. Conserved stem II of the box C/D motif is essential for nucleolar localization and is required, along with the 15.5K protein, for the hierarchical assembly of the box C/D snoRNP. Mol. Cell. Biol. 22:8342-8352.
    • (2002) Mol. Cell. Biol , vol.22 , pp. 8342-8352
    • Watkins, N.J.1    Dickmanns, A.2    Luhrmann, R.3
  • 71
    • 9744222917 scopus 로고    scopus 로고
    • Assembly and maturation of the U3 snoRNP in the nudeoplasm in a large dynamic multiprotein complex
    • Watkins, N. J., I. Lemm, D. Ingelfinger, C. Schneider, M. Hossbach, H. Urlaub, and R. Luhrmann. 2004. Assembly and maturation of the U3 snoRNP in the nudeoplasm in a large dynamic multiprotein complex. Mol. Cell 16:789-798.
    • (2004) Mol. Cell , vol.16 , pp. 789-798
    • Watkins, N.J.1    Lemm, I.2    Ingelfinger, D.3    Schneider, C.4    Hossbach, M.5    Urlaub, H.6    Luhrmann, R.7
  • 73
    • 25844527373 scopus 로고    scopus 로고
    • Detecting protein-induced folding of the U4 snRNA kink-turn by single-molecule multiparameter fluorescent resonance energy transfer measurements
    • Wozniak, A. K., S. Nottrott, E. Kuhn-Holsken, G. F. Schroder, H. Grubmuller, R. Luhrmann, C. A. Seidel, and F. Oesterhelt. 2005. Detecting protein-induced folding of the U4 snRNA kink-turn by single-molecule multiparameter fluorescent resonance energy transfer measurements. RNA 11:1545-1554.
    • (2005) RNA , vol.11 , pp. 1545-1554
    • Wozniak, A.K.1    Nottrott, S.2    Kuhn-Holsken, E.3    Schroder, G.F.4    Grubmuller, H.5    Luhrmann, R.6    Seidel, C.A.7    Oesterhelt, F.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.