메뉴 건너뛰기




Volumn 155, Issue 6-7, 2007, Pages 868-880

Waiting times for clumps of patterns and for structured motifs in random sequences

Author keywords

Clump; DNA sequence; Pattern; Probability generating function; Random sum; Structured motif

Indexed keywords

APPROXIMATION THEORY; DATA STRUCTURES; DNA SEQUENCES; FUNCTION EVALUATION; NUMBER THEORY; PROBABILITY DISTRIBUTIONS;

EID: 33846796002     PISSN: 0166218X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.dam.2005.07.016     Document Type: Article
Times cited : (16)

References (17)
  • 1
    • 35348863193 scopus 로고
    • Numerical inversion of probability generating functions
    • Abate J., and Whitt W. Numerical inversion of probability generating functions. Oper. Res. Lett. 12 (1992) 245-251
    • (1992) Oper. Res. Lett. , vol.12 , pp. 245-251
    • Abate, J.1    Whitt, W.2
  • 2
    • 0035617531 scopus 로고    scopus 로고
    • Poisson approximation for the non-overlapping appearances of several words in Markov chains
    • Chryssaphinou O., Papastavridis S., and Vaggelatou E. Poisson approximation for the non-overlapping appearances of several words in Markov chains. Combin. Probab. Comput. 10 (2001) 293-308
    • (2001) Combin. Probab. Comput. , vol.10 , pp. 293-308
    • Chryssaphinou, O.1    Papastavridis, S.2    Vaggelatou, E.3
  • 3
    • 0344376570 scopus 로고    scopus 로고
    • Finding composite regulatory patterns in DNA sequences
    • Eskin E., and Pevzner P.A. Finding composite regulatory patterns in DNA sequences. Bioinformatics 18 (2002) S354-S363
    • (2002) Bioinformatics , vol.18
    • Eskin, E.1    Pevzner, P.A.2
  • 7
    • 0033677426 scopus 로고    scopus 로고
    • Algorithms for extracting structured motifs using a suffix tree with an application to promoter and regulatory site consensus identification
    • Marsan L., and Sagot M.-F. Algorithms for extracting structured motifs using a suffix tree with an application to promoter and regulatory site consensus identification. J. Comput. Biol. 7 (2000) 345-360
    • (2000) J. Comput. Biol. , vol.7 , pp. 345-360
    • Marsan, L.1    Sagot, M.-F.2
  • 10
    • 0000794292 scopus 로고    scopus 로고
    • A unified approach to word occurrence probabilities
    • Régnier M. A unified approach to word occurrence probabilities. Discrete Appl. Math. 104 (2000) 259-280
    • (2000) Discrete Appl. Math. , vol.104 , pp. 259-280
    • Régnier, M.1
  • 11
    • 0031902984 scopus 로고    scopus 로고
    • Compound Poisson and Poisson process approximations for occurrences of multiple words in Markov chains
    • Reinert G., and Schbath S. Compound Poisson and Poisson process approximations for occurrences of multiple words in Markov chains. J. Comput. Biol. 5 (1998) 223-253
    • (1998) J. Comput. Biol. , vol.5 , pp. 223-253
    • Reinert, G.1    Schbath, S.2
  • 12
    • 0034125366 scopus 로고    scopus 로고
    • Probabilistic and statistical properties of words
    • Reinert G., Schbath S., and Waterman M. Probabilistic and statistical properties of words. J. Comput. Biol. 7 (2000) 1-46
    • (2000) J. Comput. Biol. , vol.7 , pp. 1-46
    • Reinert, G.1    Schbath, S.2    Waterman, M.3
  • 13
    • 0033238297 scopus 로고    scopus 로고
    • Exact distribution of word occurrences in a random sequence of letters
    • Robin S., and Daudin J.-J. Exact distribution of word occurrences in a random sequence of letters. J. Appl. Probab. 36 (1999) 179-193
    • (1999) J. Appl. Probab. , vol.36 , pp. 179-193
    • Robin, S.1    Daudin, J.-J.2
  • 14
    • 0000180851 scopus 로고    scopus 로고
    • Exact distribution of the distances between any occurrences of a set of words
    • Robin S., and Daudin J.-J. Exact distribution of the distances between any occurrences of a set of words. Ann. Inst. Statist. Math. 36 (2001) 895-905
    • (2001) Ann. Inst. Statist. Math. , vol.36 , pp. 895-905
    • Robin, S.1    Daudin, J.-J.2
  • 16
    • 84996141000 scopus 로고
    • Compound Poisson approximation of word counts in DNA sequences
    • Schbath S. Compound Poisson approximation of word counts in DNA sequences. ESAIM: Probab. Statist. 1 (1995) 1-16
    • (1995) ESAIM: Probab. Statist. , vol.1 , pp. 1-16
    • Schbath, S.1
  • 17
    • 0442323012 scopus 로고    scopus 로고
    • The intersite distances between pattern occurrences in strings generated by general discrete- and continuous-time models: an algorithmic approach
    • Stefanov V.T. The intersite distances between pattern occurrences in strings generated by general discrete- and continuous-time models: an algorithmic approach. J. Appl. Probab. 40 (2003) 881-892
    • (2003) J. Appl. Probab. , vol.40 , pp. 881-892
    • Stefanov, V.T.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.