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Volumn 9, Issue 6, 2002, Pages 761-773

Occurrence probability of structured motifs in random sequences

Author keywords

Markov models; Motif occurrences; Promoters; Structured motifs

Indexed keywords

AMINO ACID SEQUENCE; AMINO ACID SUBSTITUTION; ANALYTIC METHOD; ARTICLE; BACILLUS SUBTILIS; ESCHERICHIA COLI; EXTRACTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN MOTIF; PROTEIN STRUCTURE; STATISTICAL SIGNIFICANCE; TRANSCRIPTION INITIATION;

EID: 0036997774     PISSN: 10665277     EISSN: None     Source Type: Journal    
DOI: 10.1089/10665270260518254     Document Type: Article
Times cited : (35)

References (13)
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    • Van Helden, J.1    Rios, A.F.2    Collado-Vides, J.3
  • 7
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    • Compilation and analysis of Bacillus subtilis α-dependent promoter sequences: Evidence for extended contact between RNA polymerase and upstream promoter DNA
    • Helmann, J.D. 1995. Compilation and analysis of Bacillus subtilis α-dependent promoter sequences: Evidence for extended contact between RNA polymerase and upstream promoter DNA. Nucl. Acids Res. 23, 2351-2360.
    • (1995) Nucl. Acids Res. , vol.23 , pp. 2351-2360
    • Helmann, J.D.1
  • 8
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    • Algorithms for extracting structured motifs using a suffix tree with an application to promoter and regulatory site consensus identification
    • Marsan, L., and Sagot, M.-F. 2000a. Algorithms for extracting structured motifs using a suffix tree with an application to promoter and regulatory site consensus identification. J. Comp. Biol. 7, 345-362.
    • (2000) J. Comp. Biol. , vol.7 , pp. 345-362
    • Marsan, L.1    Sagot, M.-F.2
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    • Extracting structured motifs using a suffix tree - Algorithms and application to promoter consensus identification
    • Marsan, L., and Sagot, M.-F. 2000b. Extracting structured motifs using a suffix tree - algorithms and application to promoter consensus identification. RECOMB'00. Proc. 4th Ann. Int. Conf. Computational Molecular Biology, 210-219.
    • (2000) RECOMB'00. Proc. 4th Ann. Int. Conf. Computational Molecular Biology , pp. 210-219
    • Marsan, L.1    Sagot, M.-F.2
  • 10
    • 0030686456 scopus 로고    scopus 로고
    • Non-canonical sequence elements in the promoter structure. Cluster analysis of promoters recognized by Escherichia coli RNA polymerase
    • Ozoline, O.N., Deev, A.A., and Arkhipova, M.V. 1998. Non-canonical sequence elements in the promoter structure. Cluster analysis of promoters recognized by Escherichia coli RNA polymerase. Nucl. Acids Res. 25, 4703-4709.
    • (1998) Nucl. Acids Res. , vol.25 , pp. 4703-4709
    • Ozoline, O.N.1    Deev, A.A.2    Arkhipova, M.V.3
  • 12
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    • Exact distribution of word occurrences in a random sequence of letters
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    • Robin, S.1    Daudin, J.-J.2
  • 13
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    • Exact distribution of the distances between any occurrences of a set of words
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    • Robin, S.1    Daudin, J.-J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.