Forward to a detailed sequence map of bovine chromosome 6

Cytogenetic and Genome Research

Volumn 116, Issue 1-2, 2007, Pages 72-79

  Weikard, R ^a   Goldammer, T ^a   Womack, J E ^b   Kuehn, C ^a  

^a LEIBNIZ INSTITUTE FOR FARM ANIMAL BIOLOGY FBN   (Germany)

^b TEXAS A AND M UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CHROMOSOME 6; COMPUTER MODEL; COW; DNA LIBRARY; DNA POLYMORPHISM; GENE ASSIGNMENT; GENE MAPPING; GENE SEQUENCE; MOLECULAR CLONING; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; QUANTITATIVE TRAIT LOCUS; SEQUENCE HOMOLOGY;

ANIMALS; CATTLE; CHROMOSOME MAPPING; CHROMOSOMES; CHROMOSOMES, ARTIFICIAL, BACTERIAL; CONTIG MAPPING; GENE LIBRARY; GENOME; GENOME, HUMAN; HUMANS; PHYSICAL CHROMOSOME MAPPING; QUANTITATIVE TRAIT LOCI;

BOS; BOVINAE;

EID: 33846698459     PISSN: 14248581     EISSN: None     Source Type: Journal    
DOI: 10.1159/000097420     Document Type: Article

References (17)

1. Andersson L, Georges M: Domestic-animal genomics: deciphering the genetics of complex traits. Nat Rev Genet 5:202-212 (2004).
2. Brunner RM, Sanftleben H, Goldammer T, Kühn C, Weikard R, et al: The telomeric region of BTA18 containing a potential QTL region for health in cattle exhibits high similarity to the HSA19q region in humans. Genomics 81:270-278 (2003).
3. Buitkamp J, Kollers S, Durstewitz G, Fries R, Welzel K, et al: Construction and characterization of a gridded cattle BAC library. Anim Genet 31:347-351 (2000).
4. Cohen-Zinder M, Seroussi E, Larkin DM, Loor JJ, Everts-van der Wind A, et al: Identification of a missense mutation in the bovine ABCG2 gene with a major effect on the QTL on chromosome 6 affecting milk yield and composition in Holstein cattle. Genome Res 15:936-944 (2005).
5. de Koning DJ: Conflicting candidates for cattle QTLs. Trends Genet 22:301-305 (2006).
6. Everts-van der Wind A, Kata SR, Band MR, Rebeiz M, Larkin DM, et al: A 1463 gene cattle-human comparative map with anchor points defined by human genome sequence coordinates. Genome Res 14:1424-1437 (2004).
7. Everts-van der Wind A, Larkin DM, Green CA, Elliott JS, Olmstead CA, et al: A high-resolution whole-genome cattle-human comparative map reveals details of mammalian chromosome evolution. Proc Natl Acad Sci USA 102:18526-18531 (2005).
8. Fujiyama A, Watanabe H, Toyoda A, Taylor TD, Itoh T, et al: Construction and analysis of a human-chimpanzee comparative clone map. Science 295:131-134 (2002).
9. Larkin DM, Everts-van der Wind A, Rebeiz M, Schweitzer PA, Bachman S, et al: A cattle-human comparative map built with cattle BAC-ends and human genome sequence. Genome Res 13:1966-1972 (2003).
10. Mahairas GG, Wallace JC, Smith K, Swartzell S, Holzman T, et al: Sequence-tagged connectors: A sequence approach to mapping and scanning the human genome. Proc Natl Acad Sci USA 96:9739-9744 (1999).
11. Murphy WJ, Larkin DM, Everts-van der Wind A, Bourque G, Tesler G, et al: Dynamics of mammalian chromosome evolution inferred from multispecies comparative maps. Science 309:613-617 (2005). Olsen HG, Lien S, Gautier M, Nilsen H, Roseth A, Berg PR, et al: Mapping of a milk production quantitative trait locus to a 420-kb region on bovine chromosome 6. Genetics 169:275-283 (2005).
12. Schnabel RD, Kim JJ, Ashwell MS, Sonstegard TS, Van Tassell CP, et al: Fine-mapping milk production quantitative trait loci on BTA6: Analysis of the bovine osteopontin gene. Proc Natl Acad Sci USA 102:6896-6901 (2005).
13. Siegel AF, Trask B, Roach JC, Mahairas GG, Hood L, van den Engh G: Analysis of sequence-tagged-connector strategies for DNA sequencing. Genome Res 9:297-307 (1999).
14. Weikard R, Kühn C, Goldammer T, Laurent P, Womack JE, Schwerin M: Targeted construction of a high-resolution, integrated, comprehensive, and comparative map for a region specific to bovine chromosome 6 based on radiation hybrid mapping. Genomics 79:768-776 (2002).
15. Weikard R, Kuhn C, Goldammer T, Freyer G, Schwerin M: The bovine PPARGC1A gene: molecular characterization and association of an SNP with variation of milk fat synthesis. Physiol Genomics 21:1-13 (2005).
16. Weikard R, Goldammer T, Laurent P, Womack JE, Kuehn C: A gene-based high-resolution comparative radiation hybrid map as a framework for genome sequence assembly of a bovine chromosome 6 region associated with QTL for growth, body composition, and milk performance traits. BMC Genomics 7:53 (2006).
17. Zhu BL, Smith JA, Tracey SM, Konfortov BA, Welzel K, et al: A 5x genome coverage bovine BAC library: production, characterization, and distribution. Mamm Genome 10:706-709 (1999).