Plastic-embedded protein crystals

Journal of Synchrotron Radiation

Volumn 14, Issue 1, 2007, Pages 128-132

  Ravelli, Raimond B G ^a   Haselmann Weiss, Uta ^b   McGeehan, John E ^a   McCarthy, Andrew A ^a   Marquez, Josan A ^a   Antony, Claude ^b   Frangakis, Achilleas S ^b   Stranzl, Gudrun ^a  

^a EUROPEAN MOLECULAR BIOLOGY LABORATORY   (France)

^b EUROPEAN MOLECULAR BIOLOGY LABORATORY   (Germany)

Author keywords

Freeze substitution; Radiation damage; Resin embedding

Indexed keywords

ELECTRON MICROSCOPY; PROTEINS; RADIATION DAMAGE; SOLVENTS; WATER; X RAY DIFFRACTION;

CRYSTALLINE PROTEINS; FREEZE SUBSTITUTION; PLASTIC-EMBEDDED SAMPLES; RESIN EMBEDDING;

CRYSTALLINE MATERIALS;

ACRYLIC ACID RESIN; BIOMATERIAL; HEN EGG LYSOZYME; LYSOZYME; UNCLASSIFIED DRUG;

ARTICLE; CHEMICAL MODEL; CHEMICAL STRUCTURE; CHEMISTRY; COMPUTER SIMULATION; CRYSTALLIZATION; HISTOLOGY; LABORATORY DIAGNOSIS; METHODOLOGY; PROTEIN CONFORMATION; PROTEIN DENATURATION; RADIATION DOSE; RADIATION EXPOSURE; RADIATION RESPONSE; ULTRASTRUCTURE; X RAY; X RAY DIFFRACTION;

ACRYLIC RESINS; COATED MATERIALS, BIOCOMPATIBLE; COMPUTER SIMULATION; CRYSTALLIZATION; DOSE-RESPONSE RELATIONSHIP, RADIATION; MODELS, CHEMICAL; MODELS, MOLECULAR; MURAMIDASE; PLASTIC EMBEDDING; PROTEIN CONFORMATION; PROTEIN DENATURATION; RADIATION DOSAGE; SPECIMEN HANDLING; X-RAY DIFFRACTION; X-RAYS;

EID: 33846047984     PISSN: 09090495     EISSN: 16005775     Source Type: Journal    
DOI: 10.1107/S0909049506043111     Document Type: Conference Paper

References (43)

1. Collaborative Computational Project, Number 4 (1994). Acta Cryst. D50, 760-763.
2. Deshpande, A., Nimsadkar, S. & Mande, S. C. (2005). Acta Cryst. D61,1005-1008.
3. Dobrianov, I., Kriminski, S., Caylor, C. L., Lemay, S. G., Kimmer, C., Kisselev, A., Finkelstein, K. D. & Thorne, R. E. (2001). Acta Cryst. D57, 61-68.
4. Dong, J., Boggon, T. J., Chayen, N. E., Raftery, J., Bi, R.-C. & Helliwell, J. R. (1999). Acta Cryst. D55, 745-752.
5. Dubochet, J., Adrian, M., Chang, J. J., Homo, J. C., Lepault, J., McDowall, A. W. & Schultz, P. (1988). Q. Rev. Biophys. 21, 129-228.
6. Edelmann, L. (1978). Microsc. Acta Suppl. pp. 166-174.
7. Edelmann, L. (2002). J. Microsc. 207, 5-26.
8. Emsley, P. & Cowtan, K. (2004). Acta Cryst. D60, 2126-2132.
9. Fitzpatrick, P. A., Ringe, D. & Klibanov, A. M. (1994). Biochem. Biophys. Res. Commun. 198, 675-681.
10. Flot, D., Gordon, E. J., Hall, D. R., Leonard, G. A., McCarthy, A., McCarthy, J., McSweeney, S., Mitchell, E., Nurizzo, D., Ravelli, R. G. B. & Shepard, W. (2006). Acta Cryst. D62, 65-71.
11. Giddings, T. H. Jr, O'Toole, E. T., Morphew, M., Mastronarde, D. N., McIntosh, J. R. & Winey, M. (2001). Methods Cell Biol. 67, 27-42.
12. Hanson, B. L., Harp, J. M., Kirschbaum, K., Schall, C. A., DeWitt, K., Howard, A., Pinkerton, A. A. & Bunick, G. J. (2002). J. Synchrotron Rad. 9, 375-381.
13. Helliwell, J. R. (1988). J. Cryst. Growth, 90, 259-272.
14. Henderson, R. (1990). Proc. R. Soc. London Ser. B, 241, 6-8.
15. Heras, B. & Martin, J. L. (2005). Acta Cryst. D61, 1173-1180.
16. Johnson, T. J. A. (1985). J. Electron Microsc. Tech. 2,129-138.
17. Kabsch, W. (1988). J. Appl. Cryst. 21, 916-924.
18. Kauffmann, B., Weiss, M. S., Lamzin, V. S. & Schmidt, A. (2006). Structure, 14, 1099-1105.
19. Kitano, H., Murakami, S., Adachi, H., Matsumura, H., Takano, K., Inoue, T., Mori, Y., Doi, M. & Sasaki, T. (2005). J. Biosci. Bioeng. 100, 50-53.
20. Koster, A. J. & Klumperman, J. (2003). Nat. Rev. Mol. Cell Biol. Suppl. pp. SS6-10.
21. Kurinov, I. V. & Harrison, R. W. (1995). Acta Cryst. D51, 98-109.
22. McIntosh, J. R. (2001). J. Cell Biol. 153, F25-32.
23. Massover, W. H. (2007). J. Synchrotron Rad. 14, 116-127.
24. Matsko, N. & Mueller, M. (2005). J. Struct. Biol. 152, 92-103.
25. Matthews, B. W. (1968). J. Mol. Biol. 33, 491-497.
26. Murray, J. & Garman, E. (2002). J. Synchrotron Rad. 9, 347-354.
27. Murray, J. W., Garman, E. F. & Ravelli, R. B. G. (2004). J. Appl. Cryst. 37, 513-522.
28. Nagendra, H. G., Sukumar, N. & Vijayan, M. (1998). Proteins, 32, 229-240.
29. Nanao, M. H., Sheldrick, G. M. & Ravelli, R. B. G. (2005). Acta Cryst. D61, 1227-1237.
30. Nave, C. & Garman, E. F. (2005). J. Synchrotron Rad. 12, 257-260.
31. Owen, R. L., Rudino-Pinera, E. & Garman, E. F. (2006). Proc. Natl. Acad. Sci. USA, 103, 4912-4917.
32. Ravelli, R. B. G. & McSweeney, S. M. (2000). Struct. Fold Des. 8, 315-328.
33. Read, R. (1986). Acta Cryst. A42, 140-149.
34. Schneider, T. (2002). Acta Cryst. D58, 195-208.
35. Steinbrecht, R. A. (1993). Microsc. Res. Tech. 24, 488-504.
36. Steinbrecht, R. A. & Mueller, M. (1987). Cryotechniques in Biological Electron Microscopy, edited by R. A. Steinbrecht and K. Zierolds, pp. 149-172. Berlin: Springer-Verlag.
37. Vagin, A. & Teplyakov, A. (1997). J. Appl. Cryst. 30, 1022-1025.
38. Wang, Z., Zhu, G., Huang, Q., Qian, M., Shao, M., Jia, Y. & Tang, Y. (1998). Biochim, Biophys. Acta, 1384, 335-344.
39. Weik, M. (2003). Eur. Phys. J. E, 12, 153-158.
40. Weik, M., Ravelli, R. B. G., Kryger, G., McSweeney, S., Raves, M. L., Harel, M., Gros, P., Silman, I., Kroon, J. & Sussman, J. L. (2000). Proc. Natl. Acad. Sci. USA, 97, 623-628.
41. Weik, M., Schreurs, A. M., Leiros, H. K., Zaccai, G., Ravelli, R. B. G. & Gros, P. (2005). J. Synchrotron Rad. 12, 310-317.
42. Weik, M., Vernede, X., Royant, A. & Bourgeois, D. (2004). Biophys. J. 86, 3176-3185.
43. Winn, M. D., Isupov, M. N. & Murshudov, G. N. (2001). Acta Cryst. D57, 122-133.