-
1
-
-
84956970756
-
The enhanced suffix array and its applications to genome analysis
-
In Proceedings of the Second Workshop on Algorithms in Bioinformatics. Springer-Verlag
-
Abouelhoda,M.I., Kurtz,S. and Ohlebusch,E. (2002) The enhanced suffix array and its applications to genome analysis. In Proceedings of the Second Workshop on Algorithms in Bioinformatics. Lecture Notes in Computer Science 2452, Springer-Verlag, pp. 449-463.
-
(2002)
Lecture Notes in Computer Science 2452
, pp. 449-463
-
-
Abouelhoda, M.I.1
Kurtz, S.2
Ohlebusch, E.3
-
2
-
-
0042318548
-
Associations between inverted repeats and the structural evolution of bacterial genomes
-
Achaz,G. et al. (2003) Associations between inverted repeats and the structural evolution of bacterial genomes. Genetics, 164, 1279-1289.
-
(2003)
Genetics
, vol.164
, pp. 1279-1289
-
-
Achaz, G.1
-
3
-
-
0030801002
-
Gapped blast and psi-blast: A new generation of protein database search programs
-
Altschul,S.F. et al. (1997) Gapped blast and psi-blast: A new generation of protein database search programs. Nucleic Acids Res., 25, 3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
-
4
-
-
0036673472
-
Automated de novo identification of repeat sequence families in sequenced genomes
-
Bao,Z. and Eddy,S.R. (2002) Automated de novo identification of repeat sequence families in sequenced genomes. Genome Res., 12, 1269-1276.
-
(2002)
Genome Res.
, vol.12
, pp. 1269-1276
-
-
Bao, Z.1
Eddy, S.R.2
-
5
-
-
0027175241
-
Applications and statistics for multiple high-scoring segments in molecular sequences
-
Karlin,S. and Altschul,S.F. (1993) Applications and statistics for multiple high-scoring segments in molecular sequences. Proc. Natl Acad. Sci. USA, 90, 5873-5877.
-
(1993)
Proc. Natl Acad. Sci. USA
, vol.90
, pp. 5873-5877
-
-
Karlin, S.1
Altschul, S.F.2
-
6
-
-
0000821054
-
Maximal segmental match length among random sequences from a finite alphabet
-
In Cam,L.M.L. and Olshen,R.A. (eds), Association for Computing Machinery, NY
-
Karlin,S. and Ost,F. (1985) Maximal segmental match length among random sequences from a finite alphabet. In Cam,L.M.L. and Olshen,R.A. (eds), Berkeley Conference in Honor of Jerzy Neyman and Jack Kiefer. Association for Computing Machinery, NY, Vol. 1, pp. 225-243.
-
(1985)
Berkeley Conference in Honor of Jerzy Neyman and Jack Kiefer
, vol.1
, pp. 225-243
-
-
Karlin, S.1
Ost, F.2
-
7
-
-
84976712224
-
Rapid identification of repeated patterns in strings, trees and array
-
ACM
-
Karp,R.M., Miller,R.E. and Rosenberg,A.L. (1972) Rapid identification of repeated patterns in strings, trees and array. In 4th annual ACM symposium theory of computing, ACM, pp. 125-136.
-
(1972)
4th Annual ACM Symposium Theory of Computing
, pp. 125-136
-
-
Karp, R.M.1
Miller, R.E.2
Rosenberg, A.L.3
-
8
-
-
0033066718
-
Reputer: Fast computation of maximal repeats in complete genomes
-
Kurtz,S. and Schleiermacher,C. (1999) Reputer: Fast computation of maximal repeats in complete genomes. Bioinformatics, 15, 426-427.
-
(1999)
Bioinformatics
, vol.15
, pp. 426-427
-
-
Kurtz, S.1
Schleiermacher, C.2
-
9
-
-
4644275238
-
De novo repeat classification and fragment assembly
-
Pevzner,P.A. et al. (2004) De novo repeat classification and fragment assembly. Genome Res., 14, 1786-1796.
-
(2004)
Genome Res.
, vol.14
, pp. 1786-1796
-
-
Pevzner, P.A.1
-
10
-
-
29144455282
-
De novo identification of repeat families in large genomes
-
Price,A.L., Jones,N.C. and Pevzner,P.A. (2005) De novo identification of repeat families in large genomes. Bioinformatics, 21, i351-i358.
-
(2005)
Bioinformatics
, vol.21
-
-
Price, A.L.1
Jones, N.C.2
Pevzner, P.A.3
-
11
-
-
0019887799
-
Identification of common molecular subsequences
-
Smith,T.F. and Waterman,M.S. (1981) Identification of common molecular subsequences. J. Mol. Biol., 147, 195-197.
-
(1981)
J. Mol. Biol.
, vol.147
, pp. 195-197
-
-
Smith, T.F.1
Waterman, M.S.2
-
13
-
-
0031730158
-
A strategy for finding regions of similarity in complete genome sequences
-
Vincens,P. et al. (1998) A strategy for finding regions of similarity in complete genome sequences. Bioinformatics, 14, 715-725.
-
(1998)
Bioinformatics
, vol.14
, pp. 715-725
-
-
Vincens, P.1
-
14
-
-
0023661088
-
A new algorithm for best subsequence alignments with application to tRNA-rRNA comparisons
-
Waterman,M.S. and Eggert,M. (1987) A new algorithm for best subsequence alignments with application to tRNA-rRNA comparisons. J. Mol. Biol., 197, 723-728.
-
(1987)
J. Mol. Biol.
, vol.197
, pp. 723-728
-
-
Waterman, M.S.1
Eggert, M.2
-
15
-
-
0028234758
-
Rapid and accurate estimates of statistical significance for sequence data base searches
-
Waterman,M.S. and Vingron,M. (1994) Rapid and accurate estimates of statistical significance for sequence data base searches. Proc. Natl Acad. Sci. USA, 91, 4625-4628.
-
(1994)
Proc. Natl Acad. Sci. USA
, vol.91
, pp. 4625-4628
-
-
Waterman, M.S.1
Vingron, M.2
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