-
1
-
-
0002367729
-
Molphy version 2.3: programs for molecular phylogenetics based on maximum likelihood
-
Adachi J., and Hasegawa M. Molphy version 2.3: programs for molecular phylogenetics based on maximum likelihood. Comput. Sci. Monogr. 28 (1996) 1-150
-
(1996)
Comput. Sci. Monogr.
, vol.28
, pp. 1-150
-
-
Adachi, J.1
Hasegawa, M.2
-
2
-
-
23044457732
-
Automatic selection of representative proteins for bacterial phylogeny
-
Bern M., and Goldberg D. Automatic selection of representative proteins for bacterial phylogeny. BMC Evol. Biol. 5 (2005) 34
-
(2005)
BMC Evol. Biol.
, vol.5
, pp. 34
-
-
Bern, M.1
Goldberg, D.2
-
3
-
-
0033948149
-
Phylogenetic depth of the bacterial genera Aquifex and Thermotoga inferred from analysis of ribosomal protein, elongation factor, and RNA polymerase subunit sequences
-
Bocchetta M., Gribaldo S., Sanagelantoni A., and Cammarano P. Phylogenetic depth of the bacterial genera Aquifex and Thermotoga inferred from analysis of ribosomal protein, elongation factor, and RNA polymerase subunit sequences. J. Mol. Evol. 50 (2000) 366-380
-
(2000)
J. Mol. Evol.
, vol.50
, pp. 366-380
-
-
Bocchetta, M.1
Gribaldo, S.2
Sanagelantoni, A.3
Cammarano, P.4
-
4
-
-
0037118037
-
A non-hyperthermophilic ancestor for Bacteria
-
Brochier C., and Philippe H. A non-hyperthermophilic ancestor for Bacteria. Nature 417 (2002) 244
-
(2002)
Nature
, vol.417
, pp. 244
-
-
Brochier, C.1
Philippe, H.2
-
5
-
-
0034942865
-
Universal trees based on large combined protein sequence data sets
-
Brown J.R., Douady C.J., Italia M.J., Marshall W.E., and Stanhope J.M. Universal trees based on large combined protein sequence data sets. Nat. Genet. 28 (2001) 281-285
-
(2001)
Nat. Genet.
, vol.28
, pp. 281-285
-
-
Brown, J.R.1
Douady, C.J.2
Italia, M.J.3
Marshall, W.E.4
Stanhope, J.M.5
-
7
-
-
0142124433
-
The ancestor of the Bacteria domain was a hyperthermophiles
-
Di Giulio M. The ancestor of the Bacteria domain was a hyperthermophiles. J. Ther. Biol. 224 (2003) 277-783
-
(2003)
J. Ther. Biol.
, vol.224
, pp. 277-783
-
-
Di Giulio, M.1
-
8
-
-
0346104820
-
The universal ancestor and the ancestor of bacteria were hyperthermophiles
-
Di Giulio M. The universal ancestor and the ancestor of bacteria were hyperthermophiles. J. Mol. Evol. 57 (2003) 721-730
-
(2003)
J. Mol. Evol.
, vol.57
, pp. 721-730
-
-
Di Giulio, M.1
-
9
-
-
0037424668
-
The universal ancestor was a thermophile or a hyperthermophile: tests and further evidence
-
Di Giulio M. The universal ancestor was a thermophile or a hyperthermophile: tests and further evidence. J. Theor. Biol. 221 (2003) 425-436
-
(2003)
J. Theor. Biol.
, vol.221
, pp. 425-436
-
-
Di Giulio, M.1
-
10
-
-
0034818755
-
Taking variation of evolutionary rates between sites into account in inferring phylogenies
-
Felsenstein J. Taking variation of evolutionary rates between sites into account in inferring phylogenies. J. Mol. Evol. 53 (1996) 447-555
-
(1996)
J. Mol. Evol.
, vol.53
, pp. 447-555
-
-
Felsenstein, J.1
-
11
-
-
85194570673
-
-
Felsenstein, J., 2004. Phylip program version 3.63. http://evolution.genetics.washington.edu/phylip/software.html.
-
-
-
-
12
-
-
0026691182
-
The rapid generation of mutation data matrices from protein sequences
-
Jones D.T., Taylor W.R., and Thornton J.M. The rapid generation of mutation data matrices from protein sequences. Comput. Appl. Biosci. 8 (1992) 275-282
-
(1992)
Comput. Appl. Biosci.
, vol.8
, pp. 275-282
-
-
Jones, D.T.1
Taylor, W.R.2
Thornton, J.M.3
-
13
-
-
0025901140
-
Origin of life-facing up to the physical setting
-
Pace N.R. Origin of life-facing up to the physical setting. Cell 65 (1991) 531-533
-
(1991)
Cell
, vol.65
, pp. 531-533
-
-
Pace, N.R.1
-
14
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
Ronquist F., and Huelsenbeck J.P. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 9 (2003) 1572-1574
-
(2003)
Bioinformatics
, vol.9
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
15
-
-
0036205377
-
Tree-Puzzle: maximum likelihood phylogenetics analysis using quartets and parallel computing
-
Schmidt H.A., Strimmer K., Vingron M., and von Haeseler A. Tree-Puzzle: maximum likelihood phylogenetics analysis using quartets and parallel computing. Bioinformatics 18 (2002) 502-504
-
(2002)
Bioinformatics
, vol.18
, pp. 502-504
-
-
Schmidt, H.A.1
Strimmer, K.2
Vingron, M.3
von Haeseler, A.4
-
17
-
-
0031574072
-
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., and Higgins D.G. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucl. Acids Res. 25 (1997) 4876-4882
-
(1997)
Nucl. Acids Res.
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
18
-
-
2942668180
-
Evaluation of the phylogenetic position of the planctomycete 'Rhodopirellula baltica' SH 1 by means of concatenated ribosomal protein sequences DNA-directed RNA polymerase subunit sequences and whole genome trees
-
Teeling H., Lombardot T., Bauer M., Ludwig W., and Glockner F.O. Evaluation of the phylogenetic position of the planctomycete 'Rhodopirellula baltica' SH 1 by means of concatenated ribosomal protein sequences DNA-directed RNA polymerase subunit sequences and whole genome trees. Int. J. Syst. Evol. Microbiol. 54 (2004) 791-801
-
(2004)
Int. J. Syst. Evol. Microbiol.
, vol.54
, pp. 791-801
-
-
Teeling, H.1
Lombardot, T.2
Bauer, M.3
Ludwig, W.4
Glockner, F.O.5
-
19
-
-
0037498150
-
Transfer RNA paralogs: evidence for genetic code-amino acid biosynthesis coevolution and archaeal root of life
-
Xue H., Tong K.L., Marck C., Grosjean H., and Wong J.T. Transfer RNA paralogs: evidence for genetic code-amino acid biosynthesis coevolution and archaeal root of life. Gene 310 (2003) 59-66
-
(2003)
Gene
, vol.310
, pp. 59-66
-
-
Xue, H.1
Tong, K.L.2
Marck, C.3
Grosjean, H.4
Wong, J.T.5
|