Detection of ostreid herpesvirus 1 DNA by PCR in bivalve molluscs: A critical review

Journal of Virological Methods

Volumn 139, Issue 1, 2007, Pages 1-11

  Batista, Frederico M ^a,b   Arzul, Isabelle ^c   Pepin, Jean François ^c   Ruano, Francisco ^a   Friedman, Carolyn S ^d   Boudry, Pierre ^c   Renault, Tristan ^c  

^a INSTITUTO PORTUGUÊS DO MAR E DA ATMOSFERA   (Portugal)

^b UNIVERSITY OF PORTO   (Portugal)

^c IFREMER   (France)

^d UNIVERSITY OF WASHINGTON   (United States)

Author keywords

Bivalve molluscs; Detection; Herpesvirus; OsHV 1; Oyster; PCR

Indexed keywords

FORMALDEHYDE; PRIMER DNA; VIRUS DNA;

AMPLICON; BIVALVE; DIAGNOSTIC ERROR; DIAGNOSTIC PROCEDURE; DNA DETERMINATION; DNA EXTRACTION; ELECTRON MICROSCOPY; FALSE NEGATIVE RESULT; FALSE POSITIVE RESULT; GENE AMPLIFICATION; GENE SEQUENCE; GENETIC VARIABILITY; GENOME ANALYSIS; HERPES SIMPLEX VIRUS 1; HERPES VIRUS INFECTION; MOLLUSC; MORTALITY; NONHUMAN; OYSTER; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; REVIEW; SENSITIVITY AND SPECIFICITY; TRANSMISSION ELECTRON MICROSCOPY; VIRUS DETECTION; VIRUS DIAGNOSIS; VIRUS GENOME; VIRUS IDENTIFICATION;

BIVALVIA; HERPES; HERPESVIRIDAE; HUMAN HERPESVIRUS 1; MOLLUSCA; OSTREID HERPESVIRUS 1; OSTREIDAE;

EID: 33845337662     PISSN: 01660934     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jviromet.2006.09.005     Document Type: Review

References (46)

1. An S.F., and Fleming K.A. Removal of inhibitor(s) of the polymerase chain reaction from formalin fixed, paraffin wax embedded tissues. J. Clin. Pathol. 44 (1991) 924-927
2. Arzul I., Renault T., and Lipart C. Experimental herpes-like viral infections in marine bivalves: demonstration of interspecies transmission. Dis. Aquat. Org. 46 (2001) 1-6
3. Arzul I., Nicolas J.-L., Davison A.J., and Renault T. French scallops: a new host for ostreid herpesvirus-1. Virology 290 (2001) 342-349
4. Arzul I., Renault T., Lipart C., and Davison A.J. Evidence for interspecies transmission of oyster herpesvirus in marines bivalves. J. Gen. Virol. 82 (2001) 865-870
5. Arzul I., Renault T., Thébault A., and Gérard G. Detection of oyster herpesvirus DNA and proteins in asymptomatic Crassostrea gigas adults. Virus Res. 84 (2002) 151-160
6. Audemard C., Le Roux F., Barnaud A., Collins C., Sautour B., Sauriau P.-G., Montaudouin X., Coustau C., Combes C., and Berthe F. Needle in a haystack: involvement of the copepod Paracartia grani in the life-cycle of the oyster pathogen Marteilia refringens. Parasitology 124 (2002) 315-323
7. Ballagi-Pordány A., and Belák S. The use of mimics as internal standards to avoid false negatives in diagnostic PCR. Mol. Cell. Probes 10 (1996) 159-164
8. Barbosa-Solomieu V., Miossec L., Vazquez-Juarez R., Ascencio-Valle F., and Renault T. Diagnosis of ostreid herpesvirus 1 in fixed paraffin-embedded archival samples using PCR and in situ hybridisation. J. Virol. Meth. 119 (2004) 65-72
9. Barbosa-Solomieu V., Dégremont L., Vazquez-Juarez R., Ascencio-Valle F., Boudry P., and Renault T. Ostreid herpesvirus 1 detection among three successive generations of Pacific oysters (Crassostrea gigas). Virus Res. 107 (2005) 47-56
10. Batista F.M., Taris N., Boudry P., and Renault T. Detection of ostreid herpesvirus-1 (OsHV-1) by PCR using a rapid and simple method of DNA extraction from oyster larvae. Dis. Aquat. Org. 64 (2005) 1-4
11. Burge C.A., Griffin F.J., and Friedman C.S. Mortality and herpes virus infections of the Pacific oyster, Crassostrea gigas, in Tomales Bay, California, USA. Dis. Aquat. Org. 72 (2006) 31-43
12. Chang P.H., Kuo S.T., Lai S.H., Yang H.S., Ting Y.Y., Hsu C.L., and Chen H.C. Herpes-like virus infection causing mortality of cultured abalone Haliotis diversicolor supertexta in Taiwan. Dis. Aquat. Org. 65 (2005) 23-27
13. Coates P.J., d'Ardenne A.J., Khan H.O., Kangro H.O., and Slavin G. Simplified procedures for applying the polymerase chain reaction to routinely fixed paraffin wax sections. J. Clin. Pathol. 44 (1991) 115-118
14. Comps M., and Cochennec N. A herpes-like virus from the European oyster Ostrea edulis L. J. Invertebr. Pathol. 62 (1993) 201-203
15. Davison A.J. Evolution of the herpesviruses. Vet. Microbiol. 86 1/2 (2002) 69-88
16. Davison A.J., Trus B.L., Cheng N., Steven A.C., Watson M.S., Cunningham C., Le Deuff R.-M., and Renault T. A novel class of herpesvirus with bivalve hosts. J. Gen. Virol. 86 (2005) 41-53
17. Farley C.A., Banfield W.G., Kasnic J.R.G., and Foster W.S. Oyster herpes-type virus. Science 178 (1972) 759-760
18. Fox J.C., Ait-Khaled M., Webster A., and Emery V.C. Eliminating PCR contamination: is UV irradiation the answer?. J. Virol. Meth. 33 3 (1991) 375-382
19. Friedman C.S., Estes R.M., Stokes N.A., Burge C.A., Hargove J.S., Barber B.J., Elston R.A., Burreson E.M., and Reece K.S. Herpes virus in juvenile Pacific oysters Crassostrea gigas from Tomales Bay, California, coincides with summer mortality episodes. Dis. Aquat. Org. 63 (2005) 33-41
20. Hine P.M., Wesney B., and Hay B.E. Herpesviruses associated with mortalities among hatchery-reared larval Pacific oysters Crassostrea gigas. Dis. Aquat. Org. 12 (1992) 135-142
21. Hine P.M., and Thorne T. Replication of herpes-like viruses in haemocytes of adult flat oysters Ostrea angasi (Sowerby 1871): an ultrastructural study. Dis. Aquat. Org. 29 (1997) 197-204
22. Hine P.M., Wesney B., and Besant P. Replication of herpes-like viruses in larvae of the flat oyster Tiostrea chilensis at ambient temperatures. Dis. Aquat. Org. 32 (1998) 161-171
23. Jackson D.P., Lewis F.A., Taylor G.R., Boylston A.W., and Quirke P. Tissue extraction of DNA and RNA and analysis by the polymerase chain reaction. J. Clin. Pathol. 43 (1990) 499-504
24. Khadijah S., Neo S.Y., Hossain M.S., Miller L.D., Mathavan S., and Kwang J. Identification of white spot syndrome virus latency-related genes in specific-pathogen-free shrimps by use of a microarray. J. Virol. 77 18 (2003) 10162-10167
25. Kleinschmidt-DeMasters B.K., DeBiasi R.L., and Tyler K.L. Polymerase chain reaction as a diagnostic adjunct in herpesvirus infections of the nervous system. Brain Pathol. 11 (2001) 452-464
26. Le Deuff, R.-M., 1995. Contribution à l' étude de virus de mollusques marins apparentés aux Iridoviridae et aux Herpesviridae. Thèse de doctorat. Université de Bordeaux II, p. 234.
27. Le Deuff R.-M., and Renault T. Purification and partial genome characterization of a herpes-like virus infecting the Japanese oyster, Crassostrea gigas. J. Gen. Virol. 80 (1999) 1317-1322
28. Le Deuff R.-M., Nicolas J.L., Renault T., and Cochennec N. Experimental transmission of herpes-like virus to axenic larvae of Pacific oyster, Crassostrea gigas. Bull. Eur. Assoc. Fish Pathol. 14 (1994) 69-72
29. Le Roux F., Audemard C., Barnaud A., and Berthe F. DNA probes as potential tools for the detection of Marteilia refringens. Mar. Biotechnol. 1 (1999) 588-597
30. Lipart C., and Renault T. Herpes-like virus detection in infected Crassostrea gigas spat using DIG-labelled probes. J. Virol. Meth. 101 (2002) 1-10
31. Minson A.C., Davison A., Eberle R., Desrosiers R.C., Fleckstein B., McGeoch D.J., Pellet P.E., Roizman B., and Studdert D.M.J. Family Herpesviridae. In: von Regenmortel M.H.V., Fauquet C.M., Bishop D.H.L., Carsten E.B., et al. (Eds). Virus Taxonomy, Seventh Report of the International Committee on Taxonomy of Viruses (2000), Academic Press, New York 203-225
32. Nicolas J.L., Comps M., and Cochennec N. Herpes-like virus infecting Pacific oyster larvae, Crassostrea gigas. Bull. Eur. Assoc. Fish Pathol. 12 1 (1992) 11-13
33. Renault T., and Arzul I. Herpes-like virus infections in hatchery-reared bivalve larvae in Europe: specific viral DNA detection by PCR. J. Fish Dis. 24 (2001) 161-167
34. Renault T., and Lipart C. Diagnosis of herpes-like virus infections in oysters using molecular techniques. EAS Spec. Publ. 26 (1998) 235-236
35. Renault T., and Novoa B. Viruses infecting bivalve molluscs. Aquat. Living Resour. 17 (2004) 397-409
36. Renault T., Le Deuff R.-M., Cochennec N., and Maffart P. Herpesviruses associated with mortalities among Pacific oyster, C. gigas, in France-comparative study. Rev. Med. Vet. 145 (1994) 735-742
37. Renault T., Le Deuff R.-M., Lipart C., and Delsert C. Development of a PCR procedure for the detection of a herpes-like virus infecting oysters in France. J. Virol. Meth. 88 (2000) 41-50
38. Renault T., Le Deuff R.-M., Chollet B., Cochennec N., and Gérard A. Concomitant herpes-like virus infections in hatchery-reared larvae and nursery-cultured spat Crassostrea gigas, Ostrea edulis. Dis. Aquat. Org. 42 (2000) 173-183
39. Renault T., Lipart C., and Arzul I. A herpes-like virus infects a non-ostreid bivalve species: virus replication in Ruditapes philippinarum larvae. Dis. Aquat. Org. 45 (2001) 1-7
40. Renault T., Lipart C., and Arzul I. A herpes-like virus infecting Crassostrea gigas and Ruditapes philippinarum larvae in France. J. Fish Dis. 24 (2001) 369-376
41. Renault T., Arzul I., and Lipart C. Development and use of an internal standard for oyster herpesvirus 1 detection by PCR. J. Virol. Meth. 121 (2004) 17-23
42. Rys P.N., and Persing D.H. Preventing false positives: quantitative evaluation of three protocols for inactivation of polymerase chain reaction amplification products. J. Clin. Microbiol. 31 9 (1993) 2356-2360
43. Vásquez-Yeomans R., Cáceres-Martínez J., and Huerta A.F. Herpes-like virus associated with eroded gills of the Pacific oyster Crassostrea gigas in Mexico. J. Shellfish Res. 23 2 (2004) 417-419
44. Vigneron V., Solliec G., Montanié H., and Renault T. Detection of ostreid herpesvirus 1 (OsHV-1) DNA in seawater by PCR: influence of water parameters in bioassays. Dis. Aquat. Org. 62 (2004) 35-44
45. Wiedbrauk D.L., Werner J.C., and Drevon A.M. Inhibition of PCR by aqueous and vitreous fluids. J. Clin. Microbiol. 33 10 (1995) 2643-2646
46. Wilson I.G. Inhibition and facilitation of nucleic acid amplification. Appl. Environ. Microbiol. 63 10 (1997) 3741-3751