Diagnosis of Ostreid herpesvirus 1 in fixed paraffin-embedded archival samples using PCR and in situ hybridisation

Journal of Virological Methods

Volumn 119, Issue 2, 2004, Pages 65-72

  Barbosa Solomieu, V ^a,b   Miossec, L ^a   Vazquez Juarez R ^b   Ascencio Valle, F ^b   Renault, T ^a  

^a Inst Francais Rech Pour l'E   (France)

^b CENTRO DE INVESTIGACIONES BIOLÓGICAS DEL NOROESTE   (Mexico)

Author keywords

Archival samples; Crassostrea gigas; Diagnosis; Herpesvirus; In situ hybridisation; Ostrea edulis; Oyster; Polymerase chain reaction

Indexed keywords

PARAFFIN;

ARTICLE; DNA EXTRACTION; GENE SEQUENCE; GENOME; HERPES SIMPLEX VIRUS 1; IN SITU HYBRIDIZATION; MOLECULAR DYNAMICS; NONHUMAN; OYSTER; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; STATISTICAL ANALYSIS; VIRUS DETECTION; VIRUS INFECTION;

ANIMALS; DNA, VIRAL; HERPESVIRIDAE; HERPESVIRIDAE INFECTIONS; IN SITU HYBRIDIZATION; OSTREIDAE; PARAFFIN EMBEDDING; POLYMERASE CHAIN REACTION; VIRAL PROTEINS;

CRASSOSTREA; CRASSOSTREA GIGAS; HERPESVIRIDAE; OSTREA; OSTREA EDULIS; OSTREID HERPESVIRUS 1; OSTREIDAE;

EID: 2442673821     PISSN: 01660934     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jviromet.2004.02.007     Document Type: Article

References (36)

1. An S.F., Fleming K.A. removal of inhibitor(s) of the polymerase chain reaction from formalin fixed, paraffin-wax embedded tissues. J. Clin. Pathol. 44:1991;924-927
2. Arzul, I., 2001. Herpèsvirus infectant les bivalves marins: détection, génome et transmission. Thèse de doctorat. Université de Montpellier II, p. 297.
3. Arzul I., Renault T. Herpèsvirus et bivalves marins. Virologie. 6:2002;169-174
4. Arzul I., Nicolas J.L., Davison A.J., Renault T. French scallops: a new host for ostreid herpesvirus 1. Virologie. 290(2):2001a;342-349
5. Arzul I., Renault T., Lipart C. Experimental herpes-like viral infections in marine bivalves: demonstration of interspecies transmission. Dis. Aquat. Org. 46:2001b;1-6
6. Arzul I., Renault T., Lipart C., Davison A.J. Evidence for interspecies transmission of oyster herpesvirus in marine bivalves. J. Gen. Virol. 82:2001c;865-870
7. Arzul I., Renault T., Thébault A., Gerard A. Detection of oyster herpesvirus DNA and proteins in asymptomatic Crassostrea gigas adults. Virus Res. 84(1/2):2002;151-160
8. Cadoret J.P., Debon R., Cornudella L., Lardans V., Morvan A., Roch P., Boulo V. Transient expression assays with the proximal promoter of a newly characterized actin gene from the oyster Crassostrea gigas. FEBS Lett. 460(1):1999;81-85
9. Chan P.K.S., Chan D.P.C., To K.-F., Yu M.Y., Cheung J.L.K., Cheng A.F. Evaluation of extraction methods from paraffin wax embedded tissues for PCR amplification of human and viral DNA. J. Clin. Pathol. 54:2001;401-403
10. Coates P.J., d'Ardenne A.J., Khan G., Kangro H.O., Slavin G. Simplified procedures for applying the polymerase chain reaction to routinely fixed paraffin wax sections. J. Clin. Pathol. 44:1991;115-118
11. Greer C.E., Peterson S.L., Kiviat N.B., Manos M.M. PCR amplification from paraffin-embedded tissues-effects of fixative and fixation time. Am. J. Clin. Pathol. 95:1991;117-124
12. Hine P.M., Thorne E.T. Replication of herpes-like viruses in haemocytes of adult flat oysters Ostrea angasi (Sowerby, 1871): an ultrastructural study. Dis. Aquat. Org. 29:1997;189-196
13. Hine P.M., Wesney B., Besant P. Replication of a herpes-like virus in larvae of the flat oyster Tiostrea chilensis at ambient temperatures. Dis. Aquat. Org. 32:1998;161-171
14. Hine P.M., Wesney B., Hay B.E. Herpesviruses associated with mortalities among hatchery-reared Pacific oysters, Crassostrea gigas. Dis. Aquat. Org. 25:1992;143-149
15. Hopwood D. The reactions of glutaraldehyde with nucleic acids. Histochem. J. 7:1975;267-276
16. Jones, D.D., Bej, A.K., 1994. Detection of foodborne microbial pathogens using polymerase chain reaction methods. In: Griffin, H.G., Griffin, A.M. (Eds.), PCR Technology: Current Innovations. CRC Press, Boca Raton, pp. 341-365.
17. King D.P., Reid S.M., Hutchings G.H., Grieron S.S., Wilkinson P.J., Dixon L.K., Bastos A.D.S., Drew T.W. Develoment of a TaqMan PCR assay with internal amplification control for the detection of African swine fever virus. J. Virol. Methods. 107:2003;53-61
18. Kosaki R., Nakamura T., Higaki S., Yamamoto S., Inoue Y., Hayashi K., Shimomura Y., Tano Y. The use of competitive PCR for quantification of HSV-1 DNA. Jpn. J. Ophtalmol. 47:2003;240-245
19. Landis J.R., Koch G.G. The measurement of observer agreement for categorical data. Biometrics. 33:1977;159-174
20. Le Deuff, R.M., 1995. Contribution à l'étude de virus de mollusques marins apparentés aux Iridoviridae et aux Herpesviridae. Thèse de doctorat. Université de Bordeaux II, p. 234.
21. Le Deuff R.M., Renault T. Purification and partial genome characterization of a herpes-like virus infecting the Japanese oyster, Crassostrea gigas. J. Gen. Virol. 80:1999;1317-1322
22. Lipart C., Renault T. Herpes-like virus detection in infected Crassostrea gigas spat using DIG-labelled probes. J. Virol. Methods. 101(1-2):2002;1-10
23. Marchetti G., Gori A., Catozzi L., Vago L., Nebuloni M., Rossi M.C., Esposti A.D., Bandera A., Franzetti F. Evaluation of PCR in Detection of Mycobacterium tuberculosis from formalin-fixed, paraffin-embedded tissues: comparison of four amplification assays. J. Clin. Microbiol. 6:1998;1512-1517
24. Martin, Q.J., 1994. Infectious diseases. In: Mullis, K.B., Ferre, F., Gibbs, R.A. (Eds.), The Polymerase Chain Reaction. Birkhauser, Boston, pp. 406-417.
25. Mc Neilly F., Kennedy S., Moffett D., Meehan B.M., Foster J.C., Clarke E.G., Ellis J.A., Haines D.M., Adair B.M., Allan G.M. A comparison of in situ hybridisation and immunohistochemistry for the detection of a new porcine circovirus in formalin-fixed tissues from pigs with post-weaning multisystemic wasting syndrome (PMWS). J. Virol. Meth. 80:1999;123-128
26. Minson, A.C., Davison, A., Eberle, R., Desrosiers, R.C., Fleckstein, B., Mc Geoch, D.J., Pellet, P.E., Roizman, B., Studdert, D.M.J., 2000. Family Herpesviridae. In: Virus Taxonomy, Seventh Report of the International Committee on Taxonomy of Viruses, Academic Press, USA, pp. 203-225.
27. Nicolas J.L., Comps M., Cochennec N. Herpes-like virus infecting Pacific oyster larvae, Crassostrea gigas. Bull. Eur. Ass. Fish Pathol. 12(1):1992;11-13
28. Renault T. Infections herpétiques chez les inverté brés: détection de virus de type herpès chez les mollusques bivalves marins. Virologie. 2(5):1998;401-403
29. Renault T., Arzul I. Herpes-like virus infections in hatchery-reared bivalve larvae in Europe: specific viral DNA detection by PCR. J. Fish Dis. 24:2001;161-167
30. Renault, T., Lipart, C., 1998. Diagnosis of herpes-like virus infections in oysters using molecular techniques. European Aquaculture Society, Special Publication, vol. 26, pp. 235-236.
31. Renault T., Lipart C., Arzul I. A herpes-like virus infets a non-ostreid bivalve species: virus replication in Ruditapes philippinarum larvae. Dis. Aquat. Org. 45:2001;1-7
32. Renault T., Le Deuff R.M., Cochennec N., Maffart P. Herpesviruses associated with mortalities among Pacific oyster, Crassostrea gigas, in France. Comparative study. Revue Médicale Vétérinaire. 145(10):1994a;735-742
33. Renault T., Cochennec N., Le Deuff R.M., Chollet B. Herpes-like virus infecting Japanese oyster (Crassostrea gigas) spat. Bull. Eur. Assoc. Fish Pathol. 14(2):1994;64-66
34. Renault T., Le Deuff R.M., Chollet B., Cochennec N., Gérard A. Concomitant herpes-like virus infections among hatchery-reared larvae and nursery-cultured spat Crassostrea gigas and Ostrea edulis. Dis. Aquat. Org. 42:2000;173-183
35. Renault T., Le Deuff R.M., Cochennec N., Chollet B., Maffart P. Herpes-like viruses associated with high mortality levels in larvae and spat of Pacific oysters, Crassostrea gigas: a comparative study, the thermal effects on virus detection in hatchery-reared larvae, reproduction of the disease in axenic larvae. Vet. Res. 26:1995;539-543
36. Shibata D. Extraction of DNA from paraffin-embedded tissue for analysis by polymerase chain reaction: new tricks from an old friend. Hum. Pathol. 21:1994;561-563