-
1
-
-
0023548002
-
Identification of a peroxisomal targeting signal at the carboxy terminus of firefly luciferase
-
Gould S.G., Keller G.A., and Subramani S. Identification of a peroxisomal targeting signal at the carboxy terminus of firefly luciferase. J. Cell Biol. 105 (1987) 2923-2931
-
(1987)
J. Cell Biol.
, vol.105
, pp. 2923-2931
-
-
Gould, S.G.1
Keller, G.A.2
Subramani, S.3
-
2
-
-
0038122825
-
In silico prediction of the peroxisomal proteome in fungi, plants and animals
-
Emanuelsson O., Elofsson A., von Heijne G., and Cristobal S. In silico prediction of the peroxisomal proteome in fungi, plants and animals. J. Mol. Biol. 330 (2003) 443-456
-
(2003)
J. Mol. Biol.
, vol.330
, pp. 443-456
-
-
Emanuelsson, O.1
Elofsson, A.2
von Heijne, G.3
Cristobal, S.4
-
4
-
-
0344495237
-
Interaction of scavenger receptor class B type I with peroxisomal targeting receptor Pex5p
-
Johnson M.S., Johansson J.M., Svensson P.A., Aberg M.A., Eriksson P.S., Carlsson L.M., and Carlsson B. Interaction of scavenger receptor class B type I with peroxisomal targeting receptor Pex5p. Biochem. Biophys. Res. Commun. 312 (2003) 1325-1334
-
(2003)
Biochem. Biophys. Res. Commun.
, vol.312
, pp. 1325-1334
-
-
Johnson, M.S.1
Johansson, J.M.2
Svensson, P.A.3
Aberg, M.A.4
Eriksson, P.S.5
Carlsson, L.M.6
Carlsson, B.7
-
5
-
-
0742305479
-
Functional differentiation of peroxisomes revealed by expression profiles of peroxisomal genes in Arabidopsis thaliana
-
Kamada T., Nito K., Hayashi H., Mano S., Hayashi M., and Nishimura M. Functional differentiation of peroxisomes revealed by expression profiles of peroxisomal genes in Arabidopsis thaliana. Plant Cell Physiol. 44 (2003) 1275-1289
-
(2003)
Plant Cell Physiol.
, vol.44
, pp. 1275-1289
-
-
Kamada, T.1
Nito, K.2
Hayashi, H.3
Mano, S.4
Hayashi, M.5
Nishimura, M.6
-
6
-
-
3042586212
-
Specification of the peroxisome targeting signals type 1 and type 2 of plant peroxisomes by bioinformatics analyses
-
Reumann S. Specification of the peroxisome targeting signals type 1 and type 2 of plant peroxisomes by bioinformatics analyses. Plant Physiol. 135 (2004) 783-800
-
(2004)
Plant Physiol.
, vol.135
, pp. 783-800
-
-
Reumann, S.1
-
7
-
-
16544384619
-
AraPerox. A database of putative Arabidopsis proteins from plant peroxisomes
-
Reumann S., Ma C., Lemke S., and Babujee L. AraPerox. A database of putative Arabidopsis proteins from plant peroxisomes. Plant Physiol. 136 (2004) 2587-2608
-
(2004)
Plant Physiol.
, vol.136
, pp. 2587-2608
-
-
Reumann, S.1
Ma, C.2
Lemke, S.3
Babujee, L.4
-
8
-
-
33644907201
-
The evolutionary origin of peroxisomes: an ER-peroxisome connection
-
Schluter A., Fourcade S., Ripp R., Mandel J.L., Poch O., and Pujol A. The evolutionary origin of peroxisomes: an ER-peroxisome connection. Mol. Biol. Evol. 23 (2006) 838-845
-
(2006)
Mol. Biol. Evol.
, vol.23
, pp. 838-845
-
-
Schluter, A.1
Fourcade, S.2
Ripp, R.3
Mandel, J.L.4
Poch, O.5
Pujol, A.6
-
9
-
-
0037087575
-
Subcellular localization of the yeast proteome
-
Kumar A., Agarwal S., Heyman J.A., Matson S., Heidtman M., Piccirillo S., Umansky L., Drawid A., Jansen R., Liu Y., Cheung K.H., Miller P., Gerstein M., Roeder G.S., and Snyder M. Subcellular localization of the yeast proteome. Genes Dev. 16 (2002) 707-719
-
(2002)
Genes Dev.
, vol.16
, pp. 707-719
-
-
Kumar, A.1
Agarwal, S.2
Heyman, J.A.3
Matson, S.4
Heidtman, M.5
Piccirillo, S.6
Umansky, L.7
Drawid, A.8
Jansen, R.9
Liu, Y.10
Cheung, K.H.11
Miller, P.12
Gerstein, M.13
Roeder, G.S.14
Snyder, M.15
-
10
-
-
0142184341
-
Global analysis of protein localization in budding yeast
-
Huh W.K., Falvo J.V., Gerke L.C., Carroll A.S., Howson R.W., Weissman J.S., and O'Shea E.K. Global analysis of protein localization in budding yeast. Nature 425 (2003) 686-691
-
(2003)
Nature
, vol.425
, pp. 686-691
-
-
Huh, W.K.1
Falvo, J.V.2
Gerke, L.C.3
Carroll, A.S.4
Howson, R.W.5
Weissman, J.S.6
O'Shea, E.K.7
-
11
-
-
18944406929
-
The spatial organization of lipid synthesis in the yeast Saccharomyces cerevisiae derived from large scale green fluorescent protein tagging and high resolution microscopy
-
Natter K., Leitner P., Faschinger A., Wolinski H., McCraith S., Fields S., and Kohlwein S.D. The spatial organization of lipid synthesis in the yeast Saccharomyces cerevisiae derived from large scale green fluorescent protein tagging and high resolution microscopy. Mol. Cell. Proteomics 4 (2005) 662-672
-
(2005)
Mol. Cell. Proteomics
, vol.4
, pp. 662-672
-
-
Natter, K.1
Leitner, P.2
Faschinger, A.3
Wolinski, H.4
McCraith, S.5
Fields, S.6
Kohlwein, S.D.7
-
12
-
-
0032006842
-
Control of reorganization of the actin cytoskeleton by Rho family small GTP-binding proteins in yeast
-
Tanaka K., and Takai Y. Control of reorganization of the actin cytoskeleton by Rho family small GTP-binding proteins in yeast. Curr. Opin. Cell. Biol. 10 (1998) 112-116
-
(1998)
Curr. Opin. Cell. Biol.
, vol.10
, pp. 112-116
-
-
Tanaka, K.1
Takai, Y.2
-
13
-
-
0037050026
-
Functional organization of the yeast proteome by systematic analysis of protein complexes
-
Gavin A.C., Bosche M., Krause R., Grandi P., Marzioch M., Bauer A., Schultz J., Rick J.M., Michon A.M., Cruciat C.M., Remor M., Hofert C., Schelder M., Brajenovic M., Ruffner H., Merino A., Klein K., Hudak M., Dickson D., Rudi T., Gnau V., Bauch A., Bastuck S., Huhse B., Leutwein C., Heurtier M.A., Copley R.R., Edelmann A., Querfurth E., Rybin V., Drewes G., Raida M., Bouwmeester T., Bork P., Seraphin B., Kuster B., Neubauer G., and Superti-Furga G. Functional organization of the yeast proteome by systematic analysis of protein complexes. Nature 415 (2002) 141-147
-
(2002)
Nature
, vol.415
, pp. 141-147
-
-
Gavin, A.C.1
Bosche, M.2
Krause, R.3
Grandi, P.4
Marzioch, M.5
Bauer, A.6
Schultz, J.7
Rick, J.M.8
Michon, A.M.9
Cruciat, C.M.10
Remor, M.11
Hofert, C.12
Schelder, M.13
Brajenovic, M.14
Ruffner, H.15
Merino, A.16
Klein, K.17
Hudak, M.18
Dickson, D.19
Rudi, T.20
Gnau, V.21
Bauch, A.22
Bastuck, S.23
Huhse, B.24
Leutwein, C.25
Heurtier, M.A.26
Copley, R.R.27
Edelmann, A.28
Querfurth, E.29
Rybin, V.30
Drewes, G.31
Raida, M.32
Bouwmeester, T.33
Bork, P.34
Seraphin, B.35
Kuster, B.36
Neubauer, G.37
Superti-Furga, G.38
more..
-
14
-
-
33644555054
-
Proteome survey reveals modularity of the yeast cell machinery
-
Gavin A.C., Aloy P., Grandi P., Krause R., Boesche M., Marzioch M., Rau C., Jensen L.J., Bastuck S., Dumpelfeld B., Edelmann A., Heurtier M.A., Hoffman V., Hoefert C., Klein K., Hudak M., Michon A.M., Schelder M., Schirle M., Remor M., Rudi T., Hooper S., Bauer A., Bouwmeester T., Casari G., Drewes G., Neubauer G., Rick J.M., Kuster B., Bork P., Russell R.B., and Superti-Furga G. Proteome survey reveals modularity of the yeast cell machinery. Nature 440 (2006) 631-636
-
(2006)
Nature
, vol.440
, pp. 631-636
-
-
Gavin, A.C.1
Aloy, P.2
Grandi, P.3
Krause, R.4
Boesche, M.5
Marzioch, M.6
Rau, C.7
Jensen, L.J.8
Bastuck, S.9
Dumpelfeld, B.10
Edelmann, A.11
Heurtier, M.A.12
Hoffman, V.13
Hoefert, C.14
Klein, K.15
Hudak, M.16
Michon, A.M.17
Schelder, M.18
Schirle, M.19
Remor, M.20
Rudi, T.21
Hooper, S.22
Bauer, A.23
Bouwmeester, T.24
Casari, G.25
Drewes, G.26
Neubauer, G.27
Rick, J.M.28
Kuster, B.29
Bork, P.30
Russell, R.B.31
Superti-Furga, G.32
more..
-
15
-
-
19044367930
-
Transcriptome profiling to identify genes involved in peroxisome assembly and function
-
Smith J.J., Marelli M., Christmas R.H., Vizeacoumar F.J., Dilworth D.J., Ideker T., Galitski T., Dimitrov K., Rachubinski R.A., and Aitchison J.D. Transcriptome profiling to identify genes involved in peroxisome assembly and function. J. Cell Biol. 158 (2002) 259-271
-
(2002)
J. Cell Biol.
, vol.158
, pp. 259-271
-
-
Smith, J.J.1
Marelli, M.2
Christmas, R.H.3
Vizeacoumar, F.J.4
Dilworth, D.J.5
Ideker, T.6
Galitski, T.7
Dimitrov, K.8
Rachubinski, R.A.9
Aitchison, J.D.10
-
16
-
-
0037050004
-
Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry
-
Ho Y., Gruhler A., Heilbut A., Bader G.D., Moore L., Adams S.L., Millar A., Taylor P., Bennett K., Boutilier K., Yang L., Wolting C., Donaldson I., Schandorff S., Shewnarane J., Vo M., Taggart J., Goudreault M., Muskat B., Alfarano C., Dewar D., Lin Z., Michalickova K., Willems A.R., Sassi H., Nielsen P.A., Rasmussen K.J., Andersen J.R., Johansen L.E., Hansen L.H., Jespersen H., Podtelejnikov A., Nielsen E., Crawford J., Poulsen V., Sorensen B.D., Matthiesen J., Hendrickson R.C., Gleeson F., Pawson T., Moran M.F., Durocher D., Mann M., Hogue C.W., Figeys D., and Tyers M. Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature 415 (2002) 180-183
-
(2002)
Nature
, vol.415
, pp. 180-183
-
-
Ho, Y.1
Gruhler, A.2
Heilbut, A.3
Bader, G.D.4
Moore, L.5
Adams, S.L.6
Millar, A.7
Taylor, P.8
Bennett, K.9
Boutilier, K.10
Yang, L.11
Wolting, C.12
Donaldson, I.13
Schandorff, S.14
Shewnarane, J.15
Vo, M.16
Taggart, J.17
Goudreault, M.18
Muskat, B.19
Alfarano, C.20
Dewar, D.21
Lin, Z.22
Michalickova, K.23
Willems, A.R.24
Sassi, H.25
Nielsen, P.A.26
Rasmussen, K.J.27
Andersen, J.R.28
Johansen, L.E.29
Hansen, L.H.30
Jespersen, H.31
Podtelejnikov, A.32
Nielsen, E.33
Crawford, J.34
Poulsen, V.35
Sorensen, B.D.36
Matthiesen, J.37
Hendrickson, R.C.38
Gleeson, F.39
Pawson, T.40
Moran, M.F.41
Durocher, D.42
Mann, M.43
Hogue, C.W.44
Figeys, D.45
Tyers, M.46
more..
-
17
-
-
0034628508
-
A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae
-
Uetz P., Giot L., Cagney G., Mansfield T.A., Judson R.S., Knight J.R., Lockshon D., Narayan V., Srinivasan M., Pochart P., Qureshi-Emili A., Li Y., Godwin B., Conover D., Kalbfleisch T., Vijayadamodar G., Yang M., Johnston M., Fields S., and Rothberg J.M. A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae. Nature 403 (2000) 623-627
-
(2000)
Nature
, vol.403
, pp. 623-627
-
-
Uetz, P.1
Giot, L.2
Cagney, G.3
Mansfield, T.A.4
Judson, R.S.5
Knight, J.R.6
Lockshon, D.7
Narayan, V.8
Srinivasan, M.9
Pochart, P.10
Qureshi-Emili, A.11
Li, Y.12
Godwin, B.13
Conover, D.14
Kalbfleisch, T.15
Vijayadamodar, G.16
Yang, M.17
Johnston, M.18
Fields, S.19
Rothberg, J.M.20
more..
-
18
-
-
0035836765
-
A comprehensive two-hybrid analysis to explore the yeast protein interactome
-
Ito T., Chiba T., Ozawa R., Yoshida M., Hattori M., and Sakaki Y. A comprehensive two-hybrid analysis to explore the yeast protein interactome. Proc. Natl. Acad. Sci. U. S. A. 98 (2001) 4569-4574
-
(2001)
Proc. Natl. Acad. Sci. U. S. A.
, vol.98
, pp. 4569-4574
-
-
Ito, T.1
Chiba, T.2
Ozawa, R.3
Yoshida, M.4
Hattori, M.5
Sakaki, Y.6
-
19
-
-
27444445080
-
Yeast Pex14p possesses two functionally distinct Pex5p and one Pex7p binding sites
-
Niederhoff K., Meindl-Beinker N.M., Kerssen D., Perband U., Schafer A., Schliebs W., and Kunau W.H. Yeast Pex14p possesses two functionally distinct Pex5p and one Pex7p binding sites. J. Biol. Chem. 280 (2005) 35571-35578
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 35571-35578
-
-
Niederhoff, K.1
Meindl-Beinker, N.M.2
Kerssen, D.3
Perband, U.4
Schafer, A.5
Schliebs, W.6
Kunau, W.H.7
-
20
-
-
0037050020
-
Protein complexes take the bait
-
Kumar A., and Snyder M. Protein complexes take the bait. Nature 415 (2002) 123-124
-
(2002)
Nature
, vol.415
, pp. 123-124
-
-
Kumar, A.1
Snyder, M.2
-
21
-
-
0036491511
-
Analysis of mammalian peroxin interactions using a non-transcription-based bacterial two-hybrid assay
-
Fransen M., Brees C., Ghys K., Amery L., Mannaerts G.P., Ladant D., and Van Veldhoven P.P. Analysis of mammalian peroxin interactions using a non-transcription-based bacterial two-hybrid assay. Mol. Cell. Proteomics. 1 (2002) 243-252
-
(2002)
Mol. Cell. Proteomics.
, vol.1
, pp. 243-252
-
-
Fransen, M.1
Brees, C.2
Ghys, K.3
Amery, L.4
Mannaerts, G.P.5
Ladant, D.6
Van Veldhoven, P.P.7
-
22
-
-
0033571690
-
PEX12 interacts with PEX5 and PEX10 and acts downstream of receptor docking in peroxisomal matrix protein import
-
Chang C.C., Warren D.S., Sacksteder K.A., and Gould S.J. PEX12 interacts with PEX5 and PEX10 and acts downstream of receptor docking in peroxisomal matrix protein import. J. Cell Biol. 147 (1999) 761-774
-
(1999)
J. Cell Biol.
, vol.147
, pp. 761-774
-
-
Chang, C.C.1
Warren, D.S.2
Sacksteder, K.A.3
Gould, S.J.4
-
23
-
-
1642394134
-
PEX3 functions as a PEX19 docking factor in the import of class I peroxisomal membrane proteins
-
Fang Y., Morrell J.C., Jones J.M., and Gould S.J. PEX3 functions as a PEX19 docking factor in the import of class I peroxisomal membrane proteins. J. Cell Biol. 164 (2004) 863-875
-
(2004)
J. Cell Biol.
, vol.164
, pp. 863-875
-
-
Fang, Y.1
Morrell, J.C.2
Jones, J.M.3
Gould, S.J.4
-
24
-
-
0034677197
-
Saccharomyces cerevisiae pex3p and pex19p are required for proper localization and stability of peroxisomal membrane proteins
-
Hettema E.H., Girzalsky W., van Den Berg M., Erdmann R., and Distel B. Saccharomyces cerevisiae pex3p and pex19p are required for proper localization and stability of peroxisomal membrane proteins. EMBO J. 19 (2000) 223-233
-
(2000)
EMBO J.
, vol.19
, pp. 223-233
-
-
Hettema, E.H.1
Girzalsky, W.2
van Den Berg, M.3
Erdmann, R.4
Distel, B.5
-
25
-
-
0142153981
-
Cholesterol biosynthesis is not defective in peroxisome biogenesis defective fibroblasts
-
Hogenboom S., Wanders R.J., and Waterham H.R. Cholesterol biosynthesis is not defective in peroxisome biogenesis defective fibroblasts. Mol. Genet. Metab. 80 (2003) 290-295
-
(2003)
Mol. Genet. Metab.
, vol.80
, pp. 290-295
-
-
Hogenboom, S.1
Wanders, R.J.2
Waterham, H.R.3
-
26
-
-
1542313734
-
Interaction of PEX3 and PEX19 visualized by fluorescence resonance energy transfer (FRET)
-
Muntau A.C., Roscher A.A., Kunau W.H., and Dodt G. Interaction of PEX3 and PEX19 visualized by fluorescence resonance energy transfer (FRET). Adv. Exp. Med. Biol. 544 (2003) 221-224
-
(2003)
Adv. Exp. Med. Biol.
, vol.544
, pp. 221-224
-
-
Muntau, A.C.1
Roscher, A.A.2
Kunau, W.H.3
Dodt, G.4
-
27
-
-
0042130361
-
The interaction between human PEX3 and PEX19 characterized by fluorescence resonance energy transfer (FRET) analysis
-
Muntau A.C., Roscher A.A., Kunau W.H., and Dodt G. The interaction between human PEX3 and PEX19 characterized by fluorescence resonance energy transfer (FRET) analysis. Eur. J. Cell Biol. 82 (2003) 333-342
-
(2003)
Eur. J. Cell Biol.
, vol.82
, pp. 333-342
-
-
Muntau, A.C.1
Roscher, A.A.2
Kunau, W.H.3
Dodt, G.4
-
28
-
-
4644250692
-
Domain architecture and activity of human Pex19p, a chaperone-like protein for intracellular trafficking of peroxisomal membrane proteins
-
Shibata H., Kashiwayama Y., Imanaka T., and Kato H. Domain architecture and activity of human Pex19p, a chaperone-like protein for intracellular trafficking of peroxisomal membrane proteins. J. Biol. Chem. 279 (2004) 38486-38494
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 38486-38494
-
-
Shibata, H.1
Kashiwayama, Y.2
Imanaka, T.3
Kato, H.4
-
29
-
-
0033015535
-
Pex19p interacts with Pex3p and Pex10p and is essential for peroxisome biogenesis in Pichia pastoris
-
Snyder W.B., Faber K.N., Wenzel T.J., Koller A., Luers G.H., Rangell L., Keller G.A., and Subramani S. Pex19p interacts with Pex3p and Pex10p and is essential for peroxisome biogenesis in Pichia pastoris. Mol. Biol. Cell 10 (1999) 1745-1761
-
(1999)
Mol. Biol. Cell
, vol.10
, pp. 1745-1761
-
-
Snyder, W.B.1
Faber, K.N.2
Wenzel, T.J.3
Koller, A.4
Luers, G.H.5
Rangell, L.6
Keller, G.A.7
Subramani, S.8
-
30
-
-
0032979799
-
Identification and characterization of the human peroxin PEX3
-
Soukupova M., Sprenger C., Gorgas K., Kunau W.H., and Dodt G. Identification and characterization of the human peroxin PEX3. Eur. J. Cell Biol. 78 (1999) 357-374
-
(1999)
Eur. J. Cell Biol.
, vol.78
, pp. 357-374
-
-
Soukupova, M.1
Sprenger, C.2
Gorgas, K.3
Kunau, W.H.4
Dodt, G.5
-
31
-
-
0034998129
-
Clinical, biochemical and genetic aspects and neuronal migration in peroxisome biogenesis disorders
-
Suzuki Y., Shimozawa N., Imamura A., Fukuda S., Zhang Z., Orii T., and Kondo N. Clinical, biochemical and genetic aspects and neuronal migration in peroxisome biogenesis disorders. J. Inherit. Metab. Dis. 24 (2001) 151-165
-
(2001)
J. Inherit. Metab. Dis.
, vol.24
, pp. 151-165
-
-
Suzuki, Y.1
Shimozawa, N.2
Imamura, A.3
Fukuda, S.4
Zhang, Z.5
Orii, T.6
Kondo, N.7
-
32
-
-
27144457472
-
Pex3p initiates the formation of a preperoxisomal compartment from a subdomain of the endoplasmic reticulum in Saccharomyces cerevisiae
-
Tam Y.Y., Fagarasanu A., Fagarasanu M., and Rachubinski R.A. Pex3p initiates the formation of a preperoxisomal compartment from a subdomain of the endoplasmic reticulum in Saccharomyces cerevisiae. J. Biol. Chem. 280 (2005) 34933-34939
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 34933-34939
-
-
Tam, Y.Y.1
Fagarasanu, A.2
Fagarasanu, M.3
Rachubinski, R.A.4
-
33
-
-
0345791524
-
Proteomic analysis of rat liver peroxisome: presence of peroxisome-specific isozyme of Lon protease
-
Kikuchi M., Hatano N., Yokota S., Shimozawa N., Imanaka T., and Taniguchi H. Proteomic analysis of rat liver peroxisome: presence of peroxisome-specific isozyme of Lon protease. J. Biol. Chem. 279 (2004) 421-428
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 421-428
-
-
Kikuchi, M.1
Hatano, N.2
Yokota, S.3
Shimozawa, N.4
Imanaka, T.5
Taniguchi, H.6
-
34
-
-
0027818538
-
Microsomal aldehyde dehydrogenase or its cross-reacting protein exists in outer mitochondrial membranes and peroxisomal membranes in rat liver
-
Miyauchi K., Yamamoto A., Masaki R., Fujiki Y., and Tashiro Y. Microsomal aldehyde dehydrogenase or its cross-reacting protein exists in outer mitochondrial membranes and peroxisomal membranes in rat liver. Cell Struct. Funct. 18 (1993) 427-436
-
(1993)
Cell Struct. Funct.
, vol.18
, pp. 427-436
-
-
Miyauchi, K.1
Yamamoto, A.2
Masaki, R.3
Fujiki, Y.4
Tashiro, Y.5
-
35
-
-
0034843468
-
Identification of peroxisomal membrane proteins of Saccharomyces cerevisiae by mass spectrometry
-
Schafer H., Nau K., Sickmann A., Erdmann R., and Meyer H.E. Identification of peroxisomal membrane proteins of Saccharomyces cerevisiae by mass spectrometry. Electrophoresis 22 (2001) 2955-2968
-
(2001)
Electrophoresis
, vol.22
, pp. 2955-2968
-
-
Schafer, H.1
Nau, K.2
Sickmann, A.3
Erdmann, R.4
Meyer, H.E.5
-
36
-
-
0036346730
-
Proteomic analysis of leaf peroxisomal proteins in greening cotyledons of Arabidopsis thaliana
-
Fukao Y., Hayashi M., and Nishimura M. Proteomic analysis of leaf peroxisomal proteins in greening cotyledons of Arabidopsis thaliana. Plant Cell Physiol. 43 (2002) 689-696
-
(2002)
Plant Cell Physiol.
, vol.43
, pp. 689-696
-
-
Fukao, Y.1
Hayashi, M.2
Nishimura, M.3
-
37
-
-
32944471823
-
Insights into the membrane proteome of rat liver peroxisomes: microsomal glutathione-S-transferase is shared by both subcellular compartments
-
Islinger M., Luers G.H., Zischka H., Ueffing M., and Volkl A. Insights into the membrane proteome of rat liver peroxisomes: microsomal glutathione-S-transferase is shared by both subcellular compartments. Proteomics 6 (2006) 804-816
-
(2006)
Proteomics
, vol.6
, pp. 804-816
-
-
Islinger, M.1
Luers, G.H.2
Zischka, H.3
Ueffing, M.4
Volkl, A.5
-
38
-
-
0028794609
-
Development of microbody membrane proteins during the transformation of glyoxysomes to leaf peroxisomes in pumpkin cotyledons
-
Yamaguchi K., Takeuchi Y., Mori H., and Nishimura M. Development of microbody membrane proteins during the transformation of glyoxysomes to leaf peroxisomes in pumpkin cotyledons. Plant Cell Physiol. 36 (1995) 455-464
-
(1995)
Plant Cell Physiol.
, vol.36
, pp. 455-464
-
-
Yamaguchi, K.1
Takeuchi, Y.2
Mori, H.3
Nishimura, M.4
-
39
-
-
0041827355
-
Pex10p links the ubiquitin conjugating enzyme Pex4p to the protein import machinery of the peroxisome
-
Eckert J.H., and Johnsson N. Pex10p links the ubiquitin conjugating enzyme Pex4p to the protein import machinery of the peroxisome. J. Cell. Sci. 116 (2003) 3623-3634
-
(2003)
J. Cell. Sci.
, vol.116
, pp. 3623-3634
-
-
Eckert, J.H.1
Johnsson, N.2
-
40
-
-
14844311942
-
The Saccharomyces cerevisiae peroxisomal import receptor Pex5p is monoubiquitinated in wild type cells
-
Kragt A., Voorn-Brouwer T., van den Berg M., and Distel B. The Saccharomyces cerevisiae peroxisomal import receptor Pex5p is monoubiquitinated in wild type cells. J. Biol. Chem. 280 (2005) 7867-7874
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 7867-7874
-
-
Kragt, A.1
Voorn-Brouwer, T.2
van den Berg, M.3
Distel, B.4
-
41
-
-
9444290733
-
Ubiquitination of the peroxisomal import receptor Pex5p
-
Platta H.W., Girzalsky W., and Erdmann R. Ubiquitination of the peroxisomal import receptor Pex5p. Biochem. J. 384 (2004) 37-45
-
(2004)
Biochem. J.
, vol.384
, pp. 37-45
-
-
Platta, H.W.1
Girzalsky, W.2
Erdmann, R.3
-
42
-
-
0242403025
-
Novel glyoxysomal protein kinase, GPK1, identified by proteomic analysis of glyoxysomes in etiolated cotyledons of Arabidopsis thaliana
-
Fukao Y., Hayashi M., Hara-Nishimura I., and Nishimura M. Novel glyoxysomal protein kinase, GPK1, identified by proteomic analysis of glyoxysomes in etiolated cotyledons of Arabidopsis thaliana. Plant Cell Physiol. 44 (2003) 1002-1012
-
(2003)
Plant Cell Physiol.
, vol.44
, pp. 1002-1012
-
-
Fukao, Y.1
Hayashi, M.2
Hara-Nishimura, I.3
Nishimura, M.4
-
43
-
-
0036747350
-
Approaching complete peroxisome characterization by gas-phase fractionation
-
Yi E.C., Marelli M., Lee H., Purvine S.O., Aebersold R., Aitchison J.D., and Goodlett D.R. Approaching complete peroxisome characterization by gas-phase fractionation. Electrophoresis 23 (2002) 3205-3216
-
(2002)
Electrophoresis
, vol.23
, pp. 3205-3216
-
-
Yi, E.C.1
Marelli, M.2
Lee, H.3
Purvine, S.O.4
Aebersold, R.5
Aitchison, J.D.6
Goodlett, D.R.7
-
44
-
-
33644524918
-
Mass spectrometry-based proteomics turns quantitative
-
Ong S.E., and Mann M. Mass spectrometry-based proteomics turns quantitative. Nat. Chem. Biol. 1 (2005) 252-262
-
(2005)
Nat. Chem. Biol.
, vol.1
, pp. 252-262
-
-
Ong, S.E.1
Mann, M.2
-
45
-
-
19944426486
-
Quantitative mass spectrometry reveals a role for the GTPase Rho1p in actin organization on the peroxisome membrane
-
Marelli M., Smith J.J., Jung S., Yi E., Nesvizhskii A.I., Christmas R.H., Saleem R.A., Tam Y.Y., Fagarasanu A., Goodlett D.R., Aebersold R., Rachubinski R.A., and Aitchison J.D. Quantitative mass spectrometry reveals a role for the GTPase Rho1p in actin organization on the peroxisome membrane. J. Cell Biol. 167 (2004) 1099-1112
-
(2004)
J. Cell Biol.
, vol.167
, pp. 1099-1112
-
-
Marelli, M.1
Smith, J.J.2
Jung, S.3
Yi, E.4
Nesvizhskii, A.I.5
Christmas, R.H.6
Saleem, R.A.7
Tam, Y.Y.8
Fagarasanu, A.9
Goodlett, D.R.10
Aebersold, R.11
Rachubinski, R.A.12
Aitchison, J.D.13
-
46
-
-
0037370399
-
The study of macromolecular complexes by quantitative proteomics
-
Ranish J.A., Yi E.C., Leslie D.M., Purvine S.O., Goodlett D.R., Eng J., and Aebersold R. The study of macromolecular complexes by quantitative proteomics. Nat. Genet. 33 (2003) 349-355
-
(2003)
Nat. Genet.
, vol.33
, pp. 349-355
-
-
Ranish, J.A.1
Yi, E.C.2
Leslie, D.M.3
Purvine, S.O.4
Goodlett, D.R.5
Eng, J.6
Aebersold, R.7
-
47
-
-
0032875697
-
Quantitative analysis of complex protein mixtures using isotope-coded affinity tags
-
Gygi S.P., Rist B., Gerber S.A., Turecek F., Gelb M.H., and Aebersold R. Quantitative analysis of complex protein mixtures using isotope-coded affinity tags. Nat. Biotechnol. 17 (1999) 994-999
-
(1999)
Nat. Biotechnol.
, vol.17
, pp. 994-999
-
-
Gygi, S.P.1
Rist, B.2
Gerber, S.A.3
Turecek, F.4
Gelb, M.H.5
Aebersold, R.6
-
48
-
-
21644483165
-
A comparison of the consistency of proteome quantitation using two-dimensional electrophoresis and shotgun isobaric tagging in Escherichia coli cells
-
Choe L.H., Aggarwal K., Franck Z., and Lee K.H. A comparison of the consistency of proteome quantitation using two-dimensional electrophoresis and shotgun isobaric tagging in Escherichia coli cells. Electrophoresis 26 (2005) 2437-2449
-
(2005)
Electrophoresis
, vol.26
, pp. 2437-2449
-
-
Choe, L.H.1
Aggarwal, K.2
Franck, Z.3
Lee, K.H.4
-
49
-
-
33344457639
-
Simultaneous proteomic profiling of four different growth states of human fibroblasts, using amine-reactive isobaric tagging reagents and tandem mass spectrometry
-
Cong Y.S., Fan E., and Wang E. Simultaneous proteomic profiling of four different growth states of human fibroblasts, using amine-reactive isobaric tagging reagents and tandem mass spectrometry. Mech. Ageing Dev. 127 (2006) 332-343
-
(2006)
Mech. Ageing Dev.
, vol.127
, pp. 332-343
-
-
Cong, Y.S.1
Fan, E.2
Wang, E.3
-
50
-
-
0036678847
-
Dissection of transient oxidative stress response in Saccharomyces cerevisiae by using DNA microarrays
-
Koerkamp M.G., Rep M., Bussemaker H.J., Hardy G.P., Mul A., Piekarska K., Szigyarto C.A., De Mattos J.M., and Tabak H.F. Dissection of transient oxidative stress response in Saccharomyces cerevisiae by using DNA microarrays. Mol. Biol. Cell. 13 (2002) 2783-2794
-
(2002)
Mol. Biol. Cell.
, vol.13
, pp. 2783-2794
-
-
Koerkamp, M.G.1
Rep, M.2
Bussemaker, H.J.3
Hardy, G.P.4
Mul, A.5
Piekarska, K.6
Szigyarto, C.A.7
De Mattos, J.M.8
Tabak, H.F.9
-
51
-
-
0035326232
-
Quantitative analysis of bacterial and mammalian proteomes using a combination of cysteine affinity tags and 15N-metabolic labeling
-
Conrads T.P., Alving K., Veenstra T.D., Belov M.E., Anderson G.A., Anderson D.J., Lipton M.S., Pasa-Tolic L., Udseth H.R., Chrisler W.B., Thrall B.D., and Smith R.D. Quantitative analysis of bacterial and mammalian proteomes using a combination of cysteine affinity tags and 15N-metabolic labeling. Anal. Chem. 73 (2001) 2132-2139
-
(2001)
Anal. Chem.
, vol.73
, pp. 2132-2139
-
-
Conrads, T.P.1
Alving, K.2
Veenstra, T.D.3
Belov, M.E.4
Anderson, G.A.5
Anderson, D.J.6
Lipton, M.S.7
Pasa-Tolic, L.8
Udseth, H.R.9
Chrisler, W.B.10
Thrall, B.D.11
Smith, R.D.12
-
52
-
-
0037947831
-
Unbiased quantitative proteomics of lipid rafts reveals high specificity for signaling factors
-
Foster L.J., De Hoog C.L., and Mann M. Unbiased quantitative proteomics of lipid rafts reveals high specificity for signaling factors. Proc. Natl. Acad. Sci. U. S. A. 100 (2003) 5813-5818
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 5813-5818
-
-
Foster, L.J.1
De Hoog, C.L.2
Mann, M.3
-
53
-
-
0242569349
-
A proteomic approach for quantitation of phosphorylation using stable isotope labeling in cell culture
-
Ibarrola N., Kalume D.E., Gronborg M., Iwahori A., and Pandey A. A proteomic approach for quantitation of phosphorylation using stable isotope labeling in cell culture. Anal. Chem. 75 (2003) 6043-6049
-
(2003)
Anal. Chem.
, vol.75
, pp. 6043-6049
-
-
Ibarrola, N.1
Kalume, D.E.2
Gronborg, M.3
Iwahori, A.4
Pandey, A.5
-
54
-
-
2542477014
-
RNA and RNA binding proteins participate in early stages of cell spreading through spreading initiation centers
-
de Hoog C.L., Foster L.J., and Mann M. RNA and RNA binding proteins participate in early stages of cell spreading through spreading initiation centers. Cell 117 (2004) 649-662
-
(2004)
Cell
, vol.117
, pp. 649-662
-
-
de Hoog, C.L.1
Foster, L.J.2
Mann, M.3
-
55
-
-
4043141477
-
Quantitative cancer proteomics: stable isotope labeling with amino acids in cell culture (SILAC) as a tool for prostate cancer research
-
Everley P.A., Krijgsveld J., Zetter B.R., and Gygi S.P. Quantitative cancer proteomics: stable isotope labeling with amino acids in cell culture (SILAC) as a tool for prostate cancer research. Mol. Cell. Proteomics 3 (2004) 729-735
-
(2004)
Mol. Cell. Proteomics
, vol.3
, pp. 729-735
-
-
Everley, P.A.1
Krijgsveld, J.2
Zetter, B.R.3
Gygi, S.P.4
-
56
-
-
26844556166
-
I-DIRT, a general method for distinguishing between specific and nonspecific protein interactions
-
Tackett A.J., DeGrasse J.A., Sekedat M.D., Oeffinger M., Rout M.P., and Chait B.T. I-DIRT, a general method for distinguishing between specific and nonspecific protein interactions. J. Proteome Res. 4 (2005) 1752-1756
-
(2005)
J. Proteome Res.
, vol.4
, pp. 1752-1756
-
-
Tackett, A.J.1
DeGrasse, J.A.2
Sekedat, M.D.3
Oeffinger, M.4
Rout, M.P.5
Chait, B.T.6
-
57
-
-
0031593684
-
Immuno-isolation of highly purified peroxisomes using magnetic beads and continuous immunomagnetic sorting
-
Luers G.H., Hartig R., Mohr H., Hausmann M., Fahimi H.D., Cremer C., and Volkl A. Immuno-isolation of highly purified peroxisomes using magnetic beads and continuous immunomagnetic sorting. Electrophoresis 19 (1998) 1205-1210
-
(1998)
Electrophoresis
, vol.19
, pp. 1205-1210
-
-
Luers, G.H.1
Hartig, R.2
Mohr, H.3
Hausmann, M.4
Fahimi, H.D.5
Cremer, C.6
Volkl, A.7
-
58
-
-
0343051985
-
Isolation of rat hepatic peroxisomes by means of immune free flow electrophoresis
-
Volkl A., Mohr H., Weber G., and Fahimi H.D. Isolation of rat hepatic peroxisomes by means of immune free flow electrophoresis. Electrophoresis 18 (1997) 774-780
-
(1997)
Electrophoresis
, vol.18
, pp. 774-780
-
-
Volkl, A.1
Mohr, H.2
Weber, G.3
Fahimi, H.D.4
-
59
-
-
2642630629
-
Isolation of peroxisome subpopulations from rat liver by means of immune free-flow electrophoresis
-
Volkl A., Mohr H., Weber G., and Fahimi H.D. Isolation of peroxisome subpopulations from rat liver by means of immune free-flow electrophoresis. Electrophoresis 19 (1998) 1140-1144
-
(1998)
Electrophoresis
, vol.19
, pp. 1140-1144
-
-
Volkl, A.1
Mohr, H.2
Weber, G.3
Fahimi, H.D.4
-
60
-
-
0033051101
-
Direct analysis of protein complexes using mass spectrometry
-
Link A.J., Eng J., Schieltz D.M., Carmack E., Mize G.J., Morris D.R., Garvik B.M., and Yates III J.R. Direct analysis of protein complexes using mass spectrometry. Nat. Biotechnol. 17 (1999) 676-682
-
(1999)
Nat. Biotechnol.
, vol.17
, pp. 676-682
-
-
Link, A.J.1
Eng, J.2
Schieltz, D.M.3
Carmack, E.4
Mize, G.J.5
Morris, D.R.6
Garvik, B.M.7
Yates III, J.R.8
-
61
-
-
29144459934
-
Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry
-
Liu T., Qian W.J., Gritsenko M.A., Camp II D.G., Monroe M.E., Moore R.J., and Smith R.D. Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry. J. Proteome Res. 4 (2005) 2070-2080
-
(2005)
J. Proteome Res.
, vol.4
, pp. 2070-2080
-
-
Liu, T.1
Qian, W.J.2
Gritsenko, M.A.3
Camp II, D.G.4
Monroe, M.E.5
Moore, R.J.6
Smith, R.D.7
-
62
-
-
17844387148
-
The human brain mannose 6-phosphate glycoproteome: a complex mixture composed of multiple isoforms of many soluble lysosomal proteins
-
Sleat D.E., Lackland H., Wang Y., Sohar I., Xiao G., Li H., and Lobel P. The human brain mannose 6-phosphate glycoproteome: a complex mixture composed of multiple isoforms of many soluble lysosomal proteins. Proteomics 5 (2005) 1520-1532
-
(2005)
Proteomics
, vol.5
, pp. 1520-1532
-
-
Sleat, D.E.1
Lackland, H.2
Wang, Y.3
Sohar, I.4
Xiao, G.5
Li, H.6
Lobel, P.7
-
63
-
-
33645464362
-
Concanavalin A-captured glycoproteins in healthy human urine
-
Wang L., Li F., Sun W., Wu S., Wang X., Zhang L., Zheng D., Wang J., and Gao Y. Concanavalin A-captured glycoproteins in healthy human urine. Mol. Cell. Proteomics. 5 (2006) 560-562
-
(2006)
Mol. Cell. Proteomics.
, vol.5
, pp. 560-562
-
-
Wang, L.1
Li, F.2
Sun, W.3
Wu, S.4
Wang, X.5
Zhang, L.6
Zheng, D.7
Wang, J.8
Gao, Y.9
-
64
-
-
14244260623
-
Defining the SUMO-modified proteome by multiple approaches in Saccharomyces cerevisiae
-
Hannich J.T., Lewis A., Kroetz M.B., Li S.J., Heide H., Emili A., and Hochstrasser M. Defining the SUMO-modified proteome by multiple approaches in Saccharomyces cerevisiae. J. Biol. Chem. 280 (2005) 4102-4110
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 4102-4110
-
-
Hannich, J.T.1
Lewis, A.2
Kroetz, M.B.3
Li, S.J.4
Heide, H.5
Emili, A.6
Hochstrasser, M.7
-
65
-
-
4744360999
-
A proteome-wide approach identifies sumoylated substrate proteins in yeast
-
Panse V.G., Hardeland U., Werner T., Kuster B., and Hurt E. A proteome-wide approach identifies sumoylated substrate proteins in yeast. J. Biol. Chem. 279 (2004) 41346-41351
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 41346-41351
-
-
Panse, V.G.1
Hardeland, U.2
Werner, T.3
Kuster, B.4
Hurt, E.5
-
66
-
-
14644392172
-
Identification of sumoylated proteins by systematic immunoprecipitation of the budding yeast proteome
-
Wykoff D.D., and O'Shea E.K. Identification of sumoylated proteins by systematic immunoprecipitation of the budding yeast proteome. Mol. Cell. Proteomics 4 (2005) 73-83
-
(2005)
Mol. Cell. Proteomics
, vol.4
, pp. 73-83
-
-
Wykoff, D.D.1
O'Shea, E.K.2
-
67
-
-
20444375092
-
A genome-wide analysis of sumoylation-related biological processes and functions in human nucleus
-
Zhou F., Xue Y., Lu H., Chen G., and Yao X. A genome-wide analysis of sumoylation-related biological processes and functions in human nucleus. FEBS Lett. 579 (2005) 3369-3375
-
(2005)
FEBS Lett.
, vol.579
, pp. 3369-3375
-
-
Zhou, F.1
Xue, Y.2
Lu, H.3
Chen, G.4
Yao, X.5
-
68
-
-
28444460297
-
Global analysis of protein phosphorylation in yeast
-
Ptacek J., Devgan G., Michaud G., Zhu H., Zhu X., Fasolo J., Guo H., Jona G., Breitkreutz A., Sopko R., McCartney R.R., Schmidt M.C., Rachidi N., Lee S.J., Mah A.S., Meng L., Stark M.J., Stern D.F., De Virgilio C., Tyers M., Andrews B., Gerstein M., Schweitzer B., Predki P.F., and Snyder M. Global analysis of protein phosphorylation in yeast. Nature 438 (2005) 679-684
-
(2005)
Nature
, vol.438
, pp. 679-684
-
-
Ptacek, J.1
Devgan, G.2
Michaud, G.3
Zhu, H.4
Zhu, X.5
Fasolo, J.6
Guo, H.7
Jona, G.8
Breitkreutz, A.9
Sopko, R.10
McCartney, R.R.11
Schmidt, M.C.12
Rachidi, N.13
Lee, S.J.14
Mah, A.S.15
Meng, L.16
Stark, M.J.17
Stern, D.F.18
De Virgilio, C.19
Tyers, M.20
Andrews, B.21
Gerstein, M.22
Schweitzer, B.23
Predki, P.F.24
Snyder, M.25
more..
-
69
-
-
0035831456
-
Mass spectrometric resolution of reversible protein phosphorylation in photosynthetic membranes of Arabidopsis thaliana
-
Vener A.V., Harms A., Sussman M.R., and Vierstra R.D. Mass spectrometric resolution of reversible protein phosphorylation in photosynthetic membranes of Arabidopsis thaliana. J. Biol. Chem. 276 (2001) 6959-6966
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 6959-6966
-
-
Vener, A.V.1
Harms, A.2
Sussman, M.R.3
Vierstra, R.D.4
-
70
-
-
33645068852
-
Analysis of the phosphoproteome of Chlamydomonas reinhardtii provides new insights into various cellular pathways
-
Wagner V., Gessner G., Heiland I., Kaminski M., Hawat S., Scheffler K., and Mittag M. Analysis of the phosphoproteome of Chlamydomonas reinhardtii provides new insights into various cellular pathways. Eukaryotic Cell 5 (2006) 457-468
-
(2006)
Eukaryotic Cell
, vol.5
, pp. 457-468
-
-
Wagner, V.1
Gessner, G.2
Heiland, I.3
Kaminski, M.4
Hawat, S.5
Scheffler, K.6
Mittag, M.7
-
71
-
-
0037349250
-
Pex8p: an intraperoxisomal organizer of the peroxisomal import machinery
-
Agne B., Meindl N.M., Niederhoff K., Einwachter H., Rehling P., Sickmann A., Meyer H.E., Girzalsky W., and Kunau W.H. Pex8p: an intraperoxisomal organizer of the peroxisomal import machinery. Mol. Cell. 11 (2003) 635-646
-
(2003)
Mol. Cell.
, vol.11
, pp. 635-646
-
-
Agne, B.1
Meindl, N.M.2
Niederhoff, K.3
Einwachter, H.4
Rehling, P.5
Sickmann, A.6
Meyer, H.E.7
Girzalsky, W.8
Kunau, W.H.9
-
72
-
-
1542316919
-
Control of yeast filamentous-form growth by modules in an integrated molecular network
-
Prinz S., Avila-Campillo I., Aldridge C., Srinivasan A., Dimitrov K., Siegel A.F., and Galitski T. Control of yeast filamentous-form growth by modules in an integrated molecular network. Genome Res. 14 (2004) 380-390
-
(2004)
Genome Res.
, vol.14
, pp. 380-390
-
-
Prinz, S.1
Avila-Campillo, I.2
Aldridge, C.3
Srinivasan, A.4
Dimitrov, K.5
Siegel, A.F.6
Galitski, T.7
|