Evaluation of 16S-PCR detection of Dehalococcoides at two chloroethene-contaminated sites

Water Science and Technology: Water Supply

Volumn 6, Issue 3, 2006, Pages 129-136

  Schmidt, K R ^a   Stoll, C ^a   Tiehm, A ^a  

^a Water Technology Center   (Germany)

Author keywords

Bioremediation; Chloroethenes; Dehalococcoides; Microcosms; Natural attenuation; PCR

Indexed keywords

ATTENUATION; BACTERIA; BIOREMEDIATION; GROWTH KINETICS; OLEFINS; WATER QUALITY;

CHLOROETHENES; DEHALOCOCCOIDES; MICROCOSMS;

WATER POLLUTION;

ETHYLENE; GROUND WATER;

ATTENUATION; BACTERIA; BIOREMEDIATION; GROWTH KINETICS; OLEFINS; WATER POLLUTION; WATER QUALITY;

BACTERIUM; BIOREMEDIATION; CHLORINATED HYDROCARBON; DECHLORINATION; NATURAL ATTENUATION; POLYMERASE CHAIN REACTION; REDUCTION;

ANALYTIC METHOD; BACTERIAL GROWTH; BACTERIUM; BACTERIUM DETECTION; BIOREMEDIATION; CONFERENCE PAPER; DECHLORINATION; DEHALOCOCCOIDES; DNA EXTRACTION; ESCHERICHIA COLI; MICROCOSM; NONHUMAN; POLYMERASE CHAIN REACTION; WATER ANALYSIS; WATER CONTAMINATION; WATER SAMPLING;

DEHALOCOCCOIDES; TETRA;

EID: 33845245196     PISSN: 16069749     EISSN: None     Source Type: Book Series    
DOI: 10.2166/ws.2006.787     Document Type: Conference Paper

References (16)

1. Bradley, P.M. (2003). History and ecology of chloroethene biodegradation: A review. Bioremediation Journal, 7(2), 81-109.
2. El Fantroussi, S., Naveau, H. and Agathos, S.N. (1998). Anaerobic dechlorinating bacteria. Biotechnol. Prog., 14, 167-188.
3. Fennell, D., Carrol, A., Gossett, J. and Zinder, S. (2001). Assessment of indigenous reductive dechlorinating potential at a TCE-contaminated site using micorocosms, polymerase chain reaction analysis and site data. Environ. Sci. Technol., 35, 1830-1839.
4. Fetzner, S. (1998). Bacterial dehalogenation. Appl. Microbiol. Biotechnol., 50, 633-657.
5. He, J., Ritalahti, K., Aiello, M. and Löffler, E. (2003). Complete detoxification of vinyl chloride by an anaerobic enrichment culture and identification of the reductively dechlorinating population as a Dehalococcoides species. Appl. Environ. Microbiol., 69(2), 996-1003.
6. Hendrickson, E., Payne, J., Young, R., Starr, M., Perry, M., Fahnestock, S., Ellis, D. and Ebersole, C. (2002). Molecular analysis of Dehalococcoides 16S ribosomal DNA from chloroethene-contaminated sites throughout North America and Europe. Appl. Environ. Microbiol., 68(2), 485-495.
7. Löffler, F.E. and Ritalahti, K.M. (2005). Bioaugmentation: Insights from the field and application of molecular diagnostic tools. In: DECHEMA, Tagungshandbuch, Perspektiven Molekularer und Isotopischer Methoden zum Nachweis des Natürlichen Schadstoffabbaus in Böden, 29-30 September, Braunschweig, Germany, 51-57.
8. Löffier, F.E., Sun, Q., Li, J. and Tiedje, J. (2000). 16S RNA gene-based detection of tetrachloroethene-dechlorinating Desulfuromonas and Dehalococcoides species. Appl. Environ. Microbiol., 66(4). 1369-1374.
9. Maymö-Gatell, X., Chien, Y.-T., Gossett, J.M. and Zinder, S.H. (1997). Isolation of a bacterium that reductively dechlorinates tetrachloroethene to ethene. Science, 276, 1568-1571.
10. Middeldorp, P., Luijten, M., van de Pas, B., van Eekert, M., Kengen, S., Schraa, G. and Stams, A. (1999). Anaerobic microbial reductive dehalogenation of chlorinated ethenes. Bioremediation Journal, 3(3), 151-169.
11. Röling, W.F.M. and van Verseveld, H.W. (2002). Natural attenuation: What does the subsurface have in store? Biodegradation, 13, 53-64.
12. Schulze, S. and Tiehm, A. (2004). Assessment of microbial natural attenuation in groundwater polluted with gasworks residues. Water Science and Technology, 50(5), 347-353.
13. Suarez, M.P. and Rifai, H.S. (1999). Biodegradation rates for fuel hydrocarbons and chlorinated solvents in groundwater. Bioremediation Journal, 3(4), 337-362.
14. Tebbe, C.C. and Vahjen, W. (1993). Interference of humic acids and DNA extracted directly from soil in detection and transformation of recombinant DNA from bacteria and yeast. Appl. Environ. Microbiol., 59(8), 2657-2665.
15. Tiehm, A. and Schulze, S. (2003). Intrinsic aromatic hydrocarbon biodegradation for groundwater remediation. Oil and Gas Science and Technology - Rev. IFP, 58(4), 449-462.
16. Tiehm, A., Gozan, M., Müller, A., Schell, H., Lorbeer, H. and Werner, P. (2002). Sequential anaerobic/ aerobic biodegradation of chlorinated hydrocarbons in activated carbon barriers. Water Science and Technology: Water Supply. 2(2), 51-58.