메뉴 건너뛰기




Volumn 96, Issue 12, 2006, Pages 1315-1321

Rapid and sensitive detection of Phytophthora sojae in soil and infected soybeans by species-specific polymerase chain reaction assays

Author keywords

Disease management; Molecular detection

Indexed keywords

GLYCINE MAX; PHYTOPHTHORA; PHYTOPHTHORA SOJAE;

EID: 33751579424     PISSN: 0031949X     EISSN: None     Source Type: Journal    
DOI: 10.1094/PHYTO-96-1315     Document Type: Article
Times cited : (47)

References (40)
  • 1
    • 0035026519 scopus 로고    scopus 로고
    • The application of real-time PCR to the identification, detection and quantification of Pyrenophora species in barley seed
    • Bates, J. A., Taylor, E. J. A., Kenyon, D. M., and Thomas, J. E. 2001. The application of real-time PCR to the identification, detection and quantification of Pyrenophora species in barley seed. Mol. Plant Pathol. 2:49-57.
    • (2001) Mol. Plant Pathol. , vol.2 , pp. 49-57
    • Bates, J.A.1    Taylor, E.J.A.2    Kenyon, D.M.3    Thomas, J.E.4
  • 2
    • 0030942602 scopus 로고    scopus 로고
    • Detection and identification of Phytophthora fragariae Hickman by the polymerase chain reaction
    • Bonants, P., Weerdt, M. H. D., Marga, V. G. P. L. I., Cooke, D. E. L., and Duncan, J. M. 1997. Detection and identification of Phytophthora fragariae Hickman by the polymerase chain reaction. Eur. J. Plant Pathol. 103:345-355.
    • (1997) Eur. J. Plant Pathol. , vol.103 , pp. 345-355
    • Bonants, P.1    Weerdt, M.H.D.2    Marga, V.G.P.L.I.3    Cooke, D.E.L.4    Duncan, J.M.5
  • 3
    • 0001919882 scopus 로고
    • Factors affecting the germination of oospores of Phytophthora infestans
    • Chang, T. T., and Ko, W. H. 1991. Factors affecting the germination of oospores of Phytophthora infestans. J. Phytopathol. 133:29-35.
    • (1991) J. Phytopathol. , vol.133 , pp. 29-35
    • Chang, T.T.1    Ko, W.H.2
  • 5
    • 0034932974 scopus 로고    scopus 로고
    • Conventional PCR and real-time quantitative PCR detection of Helminthosporium solani in soil and on potato tubers
    • Cullen, D. W., Lees, A. K., Toth, I. K., and Duncan, J. M. 2001. Conventional PCR and real-time quantitative PCR detection of Helminthosporium solani in soil and on potato tubers. Eur. J. Plant Pathol. 107:387-398.
    • (2001) Eur. J. Plant Pathol. , vol.107 , pp. 387-398
    • Cullen, D.W.1    Lees, A.K.2    Toth, I.K.3    Duncan, J.M.4
  • 6
    • 0036270204 scopus 로고    scopus 로고
    • Detection of Colletotrichum coccodes from soil and potato tubers by conventional and quantitative real-time PCR
    • Cullen, D. W., Lees, A. K., Toth, I. K., and Duncan, J. M. 2002. Detection of Colletotrichum coccodes from soil and potato tubers by conventional and quantitative real-time PCR. Plant Pathol. 51:281-292.
    • (2002) Plant Pathol. , vol.51 , pp. 281-292
    • Cullen, D.W.1    Lees, A.K.2    Toth, I.K.3    Duncan, J.M.4
  • 7
    • 8744263850 scopus 로고    scopus 로고
    • Real-time quantitative PCR: A new technology to detect and study phytopathogenic and antagonistic fungi
    • Do Schena, L., Nigro, F., Ippolito, A., and Gallitelli, D. 2004. Real-time quantitative PCR: A new technology to detect and study phytopathogenic and antagonistic fungi. Eur. J. Plant Pathol. 110:893-908.
    • (2004) Eur. J. Plant Pathol. , vol.110 , pp. 893-908
    • Do Schena, L.1    Nigro, F.2    Ippolito, A.3    Gallitelli, D.4
  • 8
    • 0027143787 scopus 로고
    • Soybean production and disease loss estimates for north central United States from 1989 to 1991
    • Doupnik, B. J. 1993. Soybean production and disease loss estimates for north central United States from 1989 to 1991. Plant Dis. 77:1170-1171.
    • (1993) Plant Dis. , vol.77 , pp. 1170-1171
    • Doupnik, B.J.1
  • 9
    • 0028361726 scopus 로고
    • PCR amplification of species-specific DNA sequences can distinguish among Phytophthora species
    • Ersek, T., Schoelz, J. E., and English, J. T. 1994. PCR amplification of species-specific DNA sequences can distinguish among Phytophthora species. Appl. Environ. Microbiol. 60:2616-2621.
    • (1994) Appl. Environ. Microbiol. , vol.60 , pp. 2616-2621
    • Ersek, T.1    Schoelz, J.E.2    English, J.T.3
  • 11
    • 0344211422 scopus 로고    scopus 로고
    • Direct quantification of fungal DNA from soil substrate using real-time PCR
    • Filiou, M., St-Arnaud, M., and Jabaji-Hare, S. H. 2003. Direct quantification of fungal DNA from soil substrate using real-time PCR. J. Microbiol. Methods 53:67-76.
    • (2003) J. Microbiol. Methods , vol.53 , pp. 67-76
    • Filiou, M.1    St-Arnaud, M.2    Jabaji-Hare, S.H.3
  • 12
    • 0033035299 scopus 로고    scopus 로고
    • Characterization of isolates of Phytophthora infestans from tomato and potato in North Carolina from 1993 to 1995
    • Fraser, D. E., Shoemaker, P. B., and Ristaino, J. B. 1999. Characterization of isolates of Phytophthora infestans from tomato and potato in North Carolina from 1993 to 1995. Plant Dis. 83:633-638.
    • (1999) Plant Dis. , vol.83 , pp. 633-638
    • Fraser, D.E.1    Shoemaker, P.B.2    Ristaino, J.B.3
  • 13
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall, T. A. 1999. BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Series 41:95-98.
    • (1999) Nucleic Acids Symp. Series , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 14
    • 0033942037 scopus 로고    scopus 로고
    • Improved DNA extraction method for Verticillium detection and quantification in large-scale studies using PCR-based techniques
    • Heinz, R. A., and Platt, H. W. 2000. Improved DNA extraction method for Verticillium detection and quantification in large-scale studies using PCR-based techniques. Can. J. Plant Pathol. 22:117-121.
    • (2000) Can. J. Plant Pathol. , vol.22 , pp. 117-121
    • Heinz, R.A.1    Platt, H.W.2
  • 15
    • 84971072644 scopus 로고
    • Relationships between Phytophthora megasperma isolates from chick pea, lucerne and soybean
    • Irwin, J. A. G., and Dale, J. L. 1982. Relationships between Phytophthora megasperma isolates from chick pea, lucerne and soybean. Aust. J. Bot. 30:199-210.
    • (1982) Aust. J. Bot. , vol.30 , pp. 199-210
    • Irwin, J.A.G.1    Dale, J.L.2
  • 16
    • 0033772617 scopus 로고    scopus 로고
    • Enhanced PCR methods for detection and quantification of Phytophthora infestans in plants
    • Judelson, H. S., and Tooley, P. W. 2000. Enhanced PCR methods for detection and quantification of Phytophthora infestans in plants. Phytopathology 90:1112-1115.
    • (2000) Phytopathology , vol.90 , pp. 1112-1115
    • Judelson, H.S.1    Tooley, P.W.2
  • 17
    • 0012637256 scopus 로고
    • Root and stem rot of soybeans caused by Phytophthora sojae n. sp.
    • Kaufmann, M. J., and Gerdemann, J. W. 1958. Root and stem rot of soybeans caused by Phytophthora sojae n. sp. Phytopathology 48:201-208.
    • (1958) Phytopathology , vol.48 , pp. 201-208
    • Kaufmann, M.J.1    Gerdemann, J.W.2
  • 18
    • 0038378949 scopus 로고    scopus 로고
    • A species-specific polymerase chain reaction assay for rapid detection of Phytophthora nicotianae in irrigation water
    • Kong, P., Hang, C. X., Jeffers, S. N., and Richardson, P. A. 2003. A species-specific polymerase chain reaction assay for rapid detection of Phytophthora nicotianae in irrigation water. Phytopathology 93:822-831.
    • (2003) Phytopathology , vol.93 , pp. 822-831
    • Kong, P.1    Hang, C.X.2    Jeffers, S.N.3    Richardson, P.A.4
  • 19
    • 0001616718 scopus 로고
    • Detection of Phytophthora species by oligonucleotide hybridization to amplified ribosomal DNA spacers
    • Lee, S. B., White, T. J., and Taylor, J. W. 1993. Detection of Phytophthora species by oligonucleotide hybridization to amplified ribosomal DNA spacers. Phytopathology 83:177-181.
    • (1993) Phytopathology , vol.83 , pp. 177-181
    • Lee, S.B.1    White, T.J.2    Taylor, J.W.3
  • 20
    • 0036273477 scopus 로고    scopus 로고
    • Development of conventional and quantitative real-time PCR assays for the detection and identification of Rhizoctonia solani AG-3 in potato and soil
    • Lees, A. K., Cullen, D. W., Sullivan, L., and Nicolson, M. J. 2002. Development of conventional and quantitative real-time PCR assays for the detection and identification of Rhizoctonia solani AG-3 in potato and soil. Plant Pathol. 51:293-302.
    • (2002) Plant Pathol. , vol.51 , pp. 293-302
    • Lees, A.K.1    Cullen, D.W.2    Sullivan, L.3    Nicolson, M.J.4
  • 21
    • 0000517824 scopus 로고
    • Repetitive DNA polymorphism analysis as a tool for identifying Phytophthora species
    • Panabieres, F., Marais, A., Trentin, F., Bonnet, P., and Ricci, P. 1989. Repetitive DNA polymorphism analysis as a tool for identifying Phytophthora species. Phytopathology 79:1105-1109.
    • (1989) Phytopathology , vol.79 , pp. 1105-1109
    • Panabieres, F.1    Marais, A.2    Trentin, F.3    Bonnet, P.4    Ricci, P.5
  • 22
    • 33751575685 scopus 로고    scopus 로고
    • Detection of Phytophthora sojae from soil with a soybean leaf-disc baiting method
    • Peng, J. H., and Anderson, T. 1998. Detection of Phytophthora sojae from soil with a soybean leaf-disc baiting method. Plant Quarantine 12:198-203.
    • (1998) Plant Quarantine , vol.12 , pp. 198-203
    • Peng, J.H.1    Anderson, T.2
  • 23
    • 0035822055 scopus 로고    scopus 로고
    • PCR amplification of the Irish potato famine pathogen from historic specimens
    • Ristaino, J. B., Groves, C. T., and Parra, G. 2001. PCR amplification of the Irish potato famine pathogen from historic specimens. Nature 411:695-697.
    • (2001) Nature , vol.411 , pp. 695-697
    • Ristaino, J.B.1    Groves, C.T.2    Parra, G.3
  • 24
    • 0031934217 scopus 로고    scopus 로고
    • PCR amplification of ribosomal DNA for species identification in the plant pathogen genus Phytophthora
    • Ristaino, J. B., Madritch, M., Trout, C. L., and Parra, G. 1998. PCR amplification of ribosomal DNA for species identification in the plant pathogen genus Phytophthora. Appl. Environ. Microbiol. 64:948-954.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 948-954
    • Ristaino, J.B.1    Madritch, M.2    Trout, C.L.3    Parra, G.4
  • 26
    • 0000638455 scopus 로고
    • Problems and progress in control of Phytophthora root rot of soybean
    • Schmitthenner, A. F. 1985. Problems and progress in control of Phytophthora root rot of soybean. Plant Dis. 69:362-368.
    • (1985) Plant Dis. , vol.69 , pp. 362-368
    • Schmitthenner, A.F.1
  • 27
    • 19944382155 scopus 로고    scopus 로고
    • Development of a PCR assay for the molecular detection of Phytophthora boehmeriae in infected cotton
    • Shen, G., Wang, Y. C., Zhang, W. L., and Zheng, X. B. 2005. Development of a PCR assay for the molecular detection of Phytophthora boehmeriae in infected cotton. J. Phytopathol. 153:291-296.
    • (2005) J. Phytopathol. , vol.153 , pp. 291-296
    • Shen, G.1    Wang, Y.C.2    Zhang, W.L.3    Zheng, X.B.4
  • 29
    • 0006864333 scopus 로고
    • The discovery and biological characteristic studies of Phytophthora megasperma f. sp. glycinea on soybean in China
    • Su, Y. C., and Shen, C. Y. 1993. The discovery and biological characteristic studies of Phytophthora megasperma f. sp. glycinea on soybean in China. Acta Phytopathol. Sin. 23:341-347.
    • (1993) Acta Phytopathol. Sin. , vol.23 , pp. 341-347
    • Su, Y.C.1    Shen, C.Y.2
  • 30
    • 0000676252 scopus 로고
    • Evaluation of tetrazolium bromide as a vital stain for fungal oospores
    • Sutherland, E. D., and Cohen, S. D. 1983. Evaluation of tetrazolium bromide as a vital stain for fungal oospores. Phytopathology 73:1532-1535.
    • (1983) Phytopathology , vol.73 , pp. 1532-1535
    • Sutherland, E.D.1    Cohen, S.D.2
  • 31
    • 0030897276 scopus 로고    scopus 로고
    • Development of PCR primers from internal transcribed spacer region 2 for detection of Phytophthora species infecting potatoes
    • Tooley, P. W., Bunyard, B. A., Carras, M. M., and Hatziloukas, E. 1997. Development of PCR primers from internal transcribed spacer region 2 for detection of Phytophthora species infecting potatoes. Appl. Environ. Microbiol. 63:1467-1475.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 1467-1475
    • Tooley, P.W.1    Bunyard, B.A.2    Carras, M.M.3    Hatziloukas, E.4
  • 32
    • 0030804086 scopus 로고    scopus 로고
    • Rapid detection of Phytophthora infestans in late blight-infected potato and tomato using PCR
    • Trout, C. L., Ristaino, J. B., Madritch, M., and Wangsomboondee, T. 1997. Rapid detection of Phytophthora infestans in late blight-infected potato and tomato using PCR. Plant Dis. 81:1042-1048.
    • (1997) Plant Dis. , vol.81 , pp. 1042-1048
    • Trout, C.L.1    Ristaino, J.B.2    Madritch, M.3    Wangsomboondee, T.4
  • 33
    • 0027182485 scopus 로고
    • A simple method of preparing plant samples for PCR
    • Wang, H., Qi, M., and Cutler, A. J. 1993. A simple method of preparing plant samples for PCR. Nucleic Acids Res. 21:4153-4154.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 4153-4154
    • Wang, H.1    Qi, M.2    Cutler, A.J.3
  • 34
    • 11144245613 scopus 로고    scopus 로고
    • A real-time PCR assay based method for routine diagnosis of Spongospora subterranean on potato tubers
    • Ward, L. I., Beales, P. A., Barnes, A. V., and Lane, C. R. 2004. A real-time PCR assay based method for routine diagnosis of Spongospora subterranean on potato tubers. J. Phytopathol. 152:633-638.
    • (2004) J. Phytopathol. , vol.152 , pp. 633-638
    • Ward, L.I.1    Beales, P.A.2    Barnes, A.V.3    Lane, C.R.4
  • 35
    • 0033944701 scopus 로고    scopus 로고
    • Detection of Ralstonia solanacearum strains with a quantitative, multiplex, real-time, fluorogenic PCR (Taq-Man) assay
    • Weller, S. A., Elphinstone, J. G., Smith, N. C., Boonham, N., and Stead, D. E. 2000. Detection of Ralstonia solanacearum strains with a quantitative, multiplex, real-time, fluorogenic PCR (Taq-Man) assay. Appl. Environ. Microbiol. 66:2853-2858.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 2853-2858
    • Weller, S.A.1    Elphinstone, J.G.2    Smith, N.C.3    Boonham, N.4    Stead, D.E.5
  • 36
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • M. A. Innis, D. H. Gelfand, J. J. Sninsky, and T. J. White, eds. Academic Press, San Diego
    • White, T. J., Bruns, T., Lee, S. B., and Taylor, J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. Pages 315-322 in: PCR Protocols. M. A. Innis, D. H. Gelfand, J. J. Sninsky, and T. J. White, eds. Academic Press, San Diego.
    • (1990) PCR Protocols , pp. 315-322
    • White, T.J.1    Bruns, T.2    Lee, S.B.3    Taylor, J.4
  • 37
    • 0036144275 scopus 로고    scopus 로고
    • Simultaneous one tube quantification of host and pathogen DNA with real-time polymerase chain reaction
    • Winton, L. M., Stone, J. K., Watrud, L. S., and Hansen, E. M. 2002. Simultaneous one tube quantification of host and pathogen DNA with real-time polymerase chain reaction. Phytopathology 92:112-116.
    • (2002) Phytopathology , vol.92 , pp. 112-116
    • Winton, L.M.1    Stone, J.K.2    Watrud, L.S.3    Hansen, E.M.4
  • 38
    • 0028847573 scopus 로고
    • Soybean disease loss estimates for the southern United States, 1974 to 1994
    • Wrather, J. A., Chambers, A. Y., Fox, J. A., Moore, W. F., and Sciumbato, G. L. 1995. Soybean disease loss estimates for the southern United States, 1974 to 1994. Plant Dis. 79:1076-1079.
    • (1995) Plant Dis. , vol.79 , pp. 1076-1079
    • Wrather, J.A.1    Chambers, A.Y.2    Fox, J.A.3    Moore, W.F.4    Sciumbato, G.L.5
  • 40
    • 22144494615 scopus 로고    scopus 로고
    • Molecular detection of Fusarium oxysporum f. sp. niveum and Mycosphaerella melonis in infected plant tissues and soil
    • Zhang, Z. G., Zhang, J. Y., Wang, Y. C., and Zheng, X. B. 2005, Molecular detection of Fusarium oxysporum f. sp. niveum and Mycosphaerella melonis in infected plant tissues and soil. FEMS Microbiol. Lett. 249:39-47.
    • (2005) FEMS Microbiol. Lett. , vol.249 , pp. 39-47
    • Zhang, Z.G.1    Zhang, J.Y.2    Wang, Y.C.3    Zheng, X.B.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.