CHRD, a plant member of the evolutionarily conserved YjgF family, influences photosynthesis and chromoplastogenesis

Planta

Volumn 225, Issue 1, 2006, Pages 89-102

  Leitner Dagan, Yael ^a   Ovadis, Marianna ^a   Zuker, Amir ^a   Shklarman, Elena ^a   Ohad, Itzhak ^a   Tzfira, Tzvi ^b   Vainstein, Alexander ^a  

^a HEBREW UNIVERSITY OF JERUSALEM   (Israel)

^b UNIVERSITY OF MICHIGAN   (United States)

Author keywords

Chloroplast; Chromoplasts; Plastid; Stress; Tomato; YjgF protein

Indexed keywords

CAROTENOID; GREEN FLUORESCENT PROTEIN; HYBRID PROTEIN; VEGETABLE PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; CHLOROPLAST; CUCUMBER; FLOWER; GENE EXPRESSION REGULATION; GENETICS; KINETICS; METABOLISM; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; OXIDATION REDUCTION REACTION; PHOTOSYNTHESIS; PHYSIOLOGY; PLANT LEAF; PLASTID; RNA INTERFERENCE; SEQUENCE HOMOLOGY; TOMATO; TRANSGENIC PLANT; TWO HYBRID SYSTEM;

AMINO ACID SEQUENCE; CAROTENOIDS; CHLOROPLASTS; CUCUMIS SATIVUS; FLOWERS; GENE EXPRESSION REGULATION, PLANT; GREEN FLUORESCENT PROTEINS; KINETICS; LYCOPERSICON ESCULENTUM; MOLECULAR SEQUENCE DATA; OXIDATION-REDUCTION; PHOTOSYNTHESIS; PLANT LEAVES; PLANT PROTEINS; PLANTS, GENETICALLY MODIFIED; PLASTIDS; RECOMBINANT FUSION PROTEINS; RNA INTERFERENCE; SEQUENCE HOMOLOGY, AMINO ACID; TWO-HYBRID SYSTEM TECHNIQUES;

ANIMALIA; BACTERIA (MICROORGANISMS); LYCOPERSICON ESCULENTUM; MAGNOLIOPHYTA;

EID: 33751015772     PISSN: 00320935     EISSN: 14322048     Source Type: Journal    
DOI: 10.1007/s00425-006-0332-y     Document Type: Article

References (55)

1. Bartorelli A, Bussolati B, Millesimo M, Gugliotta P, Bussolati G (1996) Antibody-dependent cytotoxic activity on human cancer cells expressing UK 114 tumor membrane antigen. Int J Oncol 8:543-548
2. Ben-Meir H, Vainstein A (1994) Assessment of genetic relatedness in rose by DNA fingerprint analysis. Sci Hortic 58:115-121
3. Ben-Nissan G, Lee J-Y, Borohov A, Weiss D (2004) GIP, a Petunia hybrida GA-induced cysteine-rich protein: a possible role in shoot elongation and transition to flowering. Plant J 37:229-238
4. Broido S, Loyter A, Vainstein A (1991) Expression of plant genes in transfected mammalian cells: accumulation of recombinant preLHC IIb protein within cytoplasmic inclusion bodies. Exp Cell Res 192:248-255
5. Camara B, Hugueney P, Bouvier F, Kuntz M, Moneger R (1995) Biochemistry and molecular biology of chromoplast development. Int Rev Cytol 163:175-247
6. Ceciliani F, Faotto L, Negri A, Colombo I, Bruno B, Bartorelli A, Ronchi S (1996) The primary structure of UK114 tumor antigen. FEBS Lett 393:147-150
7. Chen HC, Klein A, Xiang MH, Backhaus RA, Kuntz M (1998) Drought- and wound-induced expression in leaves of a gene encoding a chromoplast carotenoid-associated protein. Plant J 14:317-326
8. Comai L, Moran P, Maslyar D (1990) Novel and useful properties of a chimeric plant promoter combining CaMV 35S and MAS elements. Plant Mol Biol 15:373-381
9. Farkas A, Narda G, Csermely P, Tompa P, Friedrich P (2004) DUK114, the Drosophila orthologue of bovine brain calpain activator protein, is a molecular chaperone. Biochem J 383:165-170
10. Fields S, Song OK (1989) A novel genetic system to detect protein protein interactions. Nature 340:245-246
11. Gillet B, Beyly A, Peltier G, Rey P (1998) Molecular characterization of CDSP 34, a chloroplastic protein induced by water deficit in Solanum tuberosum L. plants, and regulation of CDSP 34 expression by ABA and high illumination. Plant J 16:257-262
12. Gleave AP (1992) A versatile binary vector system with a T-DNA organization structure conducive to efficient integration of cloned DNA into plant genome. Plant Mol Biol 20:1203-1207
13. Heimann S, Klughammer C, Schreiber U (1998) Two distinct states of the thylakoids bf complex. FEBS Lett 426:126-130
14. Hernandez-Pinzon I, Ross JHE, Barnes KA, Damant AP (1999) Composition and role of tapetal lipid bodies in the biogenesis of the pollen coat of Brassica napus. Planta 208:588-598
15. Hollenberg SM, Sternglanz R, Cheng PF, Weintraub H (1995) Identification of a new family of tissue-specific basic helix-loop-helix proteins with a 2-hybrid system. Mol Cell Biol 15:3813-3822
16. Kaiser C, Michaelis S, Mitchell A (1994) Methods in yeast genetics. Cold Spring Harbor, Cold Spring Harbor Laboratory Press
17. Kanouchi H, Oka T, Asagi K, Tachibana H, Yamada K (2000) Expression and cellular distribution of perchloric acid-soluble protein is dependent on the cell-proliferating state of NRK-52E cells. Cell Mol Life Sci 57:1103-1108
18. Kessler F, Schnell D, Blobel G (1999) Identification of proteins associated with plastoglobules isolated from pea (Pisum sativum L.) chloroplasts. Planta 208:107-113
19. Kim HU, Wu SH, Ratnayake C, Huang AHC (2001a) Brassica rapa has three genes that encode proteins associated with different neutral lipids in plastids of specific tissues. Plant Physiol 126:330-341
20. Kim J-M, Yoshikawa H, Shirahige K (2001b) A member of the YER057c/yjgf/Uk114 family links isoleucine biosynthesis and intact mitochondria maintenance in Saccharomyces cerevisiae. Genes Cells 6:507-517
21. Laizet Y, Pontier D, Mache R, Kuntz M (2004) Subfamily organization and phylogenetic origin of genes encoding plastid lipid-associated proteins of the fibrillin type. J Gen Sci Tech 3:17-26
22. Langenkamper G, Manac'h N, Broin M, Cuine S, Becuwe N, Kuntz M, Rey P (2001) Accumulation of plastid lipid-associated proteins (fibrillin/CDSP34) upon oxidative stress, ageing and biotic stress in Solanaceae and in response to drought in other species. J Exp Bot 52:1545-1554
23. LaRossa RA, Van Dyk TK (1984) Metabolic mayhem caused by 2-ketoacid imbalances. BioEssays 7:125-130
24. Levy-Favatier F, Leroux A, Antoine B, Nedelec B, Delpech M (2004) Upregulation of rat P23 (a member of the YjgF protein family) by fasting, glucose diet and fatty acid feeding. Cell Mol Life Sci 61:2886-2892
25. Libal-Weksler Y, Vishnevetsky M, Ovadis M, Vainstein A (1997) Isolation and regulation of accumulation of a minor chromoplast-specific protein from cucumber corollas. Plant Physiol 113:59-63
26. Lichtenthaler HK (1987) Chlorophylls and carotenoids: pigments of photosynthetic biomembranes. Methods Enzymol 148:350-382
27. Manjasetty BA, Delbruck H, Pham DT, Mueller U, Fieber-Erdmann M, Scheich C, Sievert V, Bussow K, Niesen FH, Weihofen W, Loll B, Saenger W, Heinemann U (2004) Crystal structure of Homo sapiens protein hp14.5. Proteins 54:797-800
28. Mistiniene E, Luksa V, Sereikaite J, Naktinis V (2003) Oligomeric assembly and ligand binding of the member of protein family YER057c/YIL051c/ YJGF. Bioconjugate Chem 14:1243-1252
29. Monte E, Ludevid D, Prat S (1999) Leaf C40.4: a carotenoid-associated protein involved in the modulation of photosynthetic efficiency. Plant J 19:399-410
30. Morishita R, Kawagoshi A, Sawasaki T, Madin K, Ogasawara T, Oka T, Endo Y (1999) Ribonuclease activity of rat liver per-chloric acid-soluble protein, a potent inhibitor of protein synthesis. J Biol Chem 274:20688-20692
31. Murphy DJ (2004) The roles of lipid bodies and lipid-body proteins in the assembly and trafficking of lipids in plant cells. In: Proceedings of the 16th international plant lipid symposium. Budapest, pp 55-62
32. Neta-Sharir I, Isaacson T, Lurie S, Weiss D (2005) Dual role for tomato heat shock protein 21:protecting photosystem II from oxidative stress and promoting color changes during fruit maturation. Plant Cell 17:1829-1838
33. Niyogi KK (1999) Photoprotection revisited: genetic and molecular approaches. Annu Rev Plant Physiol Plant Biol 50:333-359
34. Oxelmark E, Marchini A, Malanchi I, Magherini F, Jaquet L, Hajibagheri MAN., Blight KJ, Jauniaux J-C, Tommasino M (2000) Mmf1p, a novel yeast mitochondrial protein conserved throughout evolution and involved in maintenance of the mitochondrial genome. Mol Cell Biol 20:7784-7797
35. Park H, Sternglanz R (1998) Two separate conserved domains of eukaryotic DNA topoisomerase I bind to each other and reconstitute enzymatic activity. Chromosoma 107:211-215
36. Parsons L, Bonander N, Eisenstein E, Gilson M, Kairys V, Orban J (2003) Solution structure and functional ligand screening of HI0719, a highly conserved protein from bacteria and humans in the YjgF/YER057c/UK114 family. Biochemistry 42:80-89
37. Pozueta-Romero J, Rafia F, Houlne G, Cheniclet C, Carde JP, Schantz ML, Schantz R (1997) A ubiquitous plant housekeeping gene, PAP, encodes a major protein component of bell pepper chromoplasts. Plant Physiol 115:1185-1194
38. Rey P, Gillet B, Romer S, Eymery F, Massimino J, Peltier G, Kuntz M (2000) Over-expression of a pepper plastid lipid-associated protein in tobacco leads to changes in plastid ultrastructure and plant development upon stress. Plant J 21:483-494
39. Samuel SJ, Tzung S-P Cohen SA (1997) Hrp12, a novel heat-responsive, tissue-specific, phosphorylated protein isolated from mouse liver. Hepatology 25:1213-1222
40. Sasagawa T, Oka T, Tokumura A, Nishimoto Y, Munoz S, Kuwahata M, Okita M, Tsuji H, Natori Y (1999) Analysis of the fatty acid components in a perchloric acid-soluble protein. Biochim Biophys Acta 1437:317-324
41. Schmiedeknecht G, Kerkhoff C, Orso E, Stohr J, Aslanidis C, Nagy GM, Knuechel R, Schmitz G (1996) Isolation and characterization of a 14.5-kDa trichloroacetic-acid-soluble translational inhibitor protein from human monocytes that is upregulated upon cellular differentiation. Eur J Biochem 242:339-351
42. Schmitz G, Downs AM (2004) Reduced transaminase B (IlvE) activity caused by the lack of yjgF is dependent on the status of threonine deaminase (IlvA) in Salmonella enterica serovar typhimurium. J Bacteriol 186:803-810
43. Sinha S, Rappu P, Lange SC, Mantsala P, Zalkin H, Smith JL (1999) Crystal structure of Bacillus subtilis YabJ, a purine regulatory protein and member of highly conserved YjgF family. Proc Natl Acad Sci USA 96:13074-13079
44. Smith MD, Licatalosi DD, Thompson JE (2000) Co-association of cytochrome f catabolites and plastid-lipid-associated protein with chloroplast lipid particles. Plant Physiol 124:211-221
45. Staehelin LA (2003) Chloroplast structure: from chlorophyll granules to supra-molecular architecture of thylakoid membranes. Photosynth Res 76:185-196
46. Suzuki K, Nishida T, Matsumoto M, Kanouchi H, Kaneki K, Oka T (2001) Purification, characterization and developmental expression of rat brain PSP protein. Biochim Biophys Acta 1527:47-53
47. Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acid Res 22:4673-4680
48. Ting JTL, Wu SSH, Ratnayake C, Huang AHC (1998) Constituents of the tapetosomes and elaioplasts in Brassica campestris tapetum and their degradation and retention during microsporogenesis. Plant J 16:541-551
49. Vishnevetsky M (1999) Chromoplast biogenesis during flower development. Ph.D. thesis. The Hebrew University of Jerusalem, Jerusalem, Israel
50. Vishnevetsky M, Ovadis M, Itzhaki H, Levy M, Libal-Weksler Y, Adam Z, Vainstein A (1996) Molecular cloning of a carotenoid-associated protein from Cucumis sativus corollas: homologous genes involved in carotenoid sequestration in chromoplasts. Plant J 10:1111-1118
51. Vishnevetsky M, Ovadis M, Vainstein A (1999a) Carotenoid sequestration in plants: the role of carotenoid-associated proteins. Trends Plant Sci 4:232-235
52. Vishnevetsky M, Ovadis M, Zuker A, Vainstein A (1999b) Molecular mechanisms underlying carotenogenesis in the chromoplast: multilevel regulation of carotenoid-associated genes. Plant J 20:423-431
53. Volz K (1999) A test case for structure-based functional assignment: the 1.2 Å crystal structure of the yjgF gene product from Escherichia coli. Protein Sci 8:2428-2437
54. Waterhouse PM, Graham MW, Wang MB (1998) Virus resistance and gene silencing in plants can be induced by simultaneous expression of sense and antisense. Proc Natl Acad Sci USA 95:13959-13964
55. Ytterberg AJ, Peltier J-B, van Wijk KJ (2006) Protein profiling of plastoglobules in chloroplasts and chromoplasts. A surprising site for differential accumulation of metabolic enzymes. Plant Physiol 140:984-997