On the color-tuning mechanism of Human-Blue visual pigment: SAC-CI and QM/MM study

Chemical Physics Letters

Volumn 432, Issue 1-3, 2006, Pages 252-256

  Fujimoto, Kazuhiro ^a   Hasegawa, Jun ya ^a   Hayashi, Shigehiko ^a,b   Nakatsuji, Hiroshi ^a  

^a KYOTO UNIVERSITY   (Japan)

^b JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

DECOMPOSITION; ELECTROSTATICS; ENERGY ABSORPTION; MATHEMATICAL MODELS; OPTIMIZATION; QUANTUM EFFICIENCY;

COLOR TUNING; COUNTER-RESIDUE; HUMAN-BLUE VISUAL PIGMENT;

PIGMENTS;

EID: 33750953621     PISSN: 00092614     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cplett.2006.10.011     Document Type: Article

References (27)

1. Kandori H., Schichida Y., and Yoshisawa T. Biochemistry 66 (2001) 1197
2. Mathies R.A., and Lugtenburg J. In: Stavenga D.G., Grip W.J.d., and Pugh E.N. (Eds). Handbook of Biological Physics (2000), Elsevier Science B.V., Amsterdam
3. Kandori H. Chem. Ind. 18 (1995) 735
4. Hayashi S., and Ohmine I. J. Phys. Chem. B 104 (2000) 10678
5. Hayashi S., Tajkhorshid E., Pebay-Peyroula E., Royant A., Landau E.M., Navarro J., and Schulten K. J. Phys. Chem. B 105 (2001) 10124
6. Schreiber M., Buss V., and Sugihara M. J. Chem. Phys. 119 (2003) 12045
7. Vreven T., and Morokuma K. Theor. Chem. Acc. 109 (2003) 125
8. Ferré N., and Olivucci M. J. Am. Chem. Soc. 125 (2003) 6868
9. Gascon J.A., and Batista V.S. Biophys. J. 87 (2004) 2931
10. Andruniów T., Ferré N., and Olivucci M. Proc. Natl. Acad. Sci. U.S.A. 101 (2004) 17908
11. Wanko M., et al. J. Phys. Chem. B 109 (2005) 3606
12. Stenkamp R.E., Filipek S., Driessen C.A.G.G., Teller D.C., and Palczewski K. Biochim. Biophys. Acta 1565 (2002) 168
13. Terakita A., Koyanagi M., Tsukamoto H., Yamashita T., Miyata T., and Shichida Y. Nature Struct. Mol. Biol. 11 (2004) 284
14. Hayashi S., Tajkhorshid E., and Schulten K. Biophys. J. 83 (2002) 1281
15. Fujimoto K., Hasegawa J., Hayashi S., Kato S., and Nakatsuji H. Chem. Phys. Lett. 414 (2005) 239
16. Wang J., Cieplak P., and Kollman P.A. J. Comput. Chem. 21 (2000) 1049
17. K. Fujimoto, S. Hayasji, J. Hasegawa, H. Nakatsuji, submitted for publication.
18. Nakatsuji H. Chem. Phys. Lett. 59 (1978) 362
19. Nakatsuji H. Chem. Phys. Lett. 67 (1979) 329
20. Nakatsuji H. Chem. Phys. Lett. 67 (1979) 334
21. Nakatsuji H. In: Leszcynski J. (Ed). Computational Chemistry - Reviews of Current Trends (1997), World Scientific, Singapore
22. Okada T., Fujiyoshi Y., Silow M., Navarro J., Landau E.M., and Shichida Y. Proc. Natl. Acad. Sci. U.S.A. 99 (2002) 5982
23. Dunning Jr. T.H., and Hey P.J. In: Shaefer III H.F. (Ed). Method of Electronic Structure Theory (1977), Plenum Press, New York 1
24. Dunning Jr. T.H. J. Chem. Phys. 90 (1989) 1007
25. Fasick J.I., Lee N., and Oprian D.D. Biochemistry 38 (1999) 11593
26. Lin S.W., Imamoto Y., Fukuda Y., Shichida Y., Yoshizawa T., and Mathies R.A. Biochemistry 33 (1994) 2151
27. Kochendoerfer G.G., Wang Z., Oprian D.D., and Mathies R.A. Biochemistry 36 (1997) 6577