-
1
-
-
0034708480
-
The genome sequence of Drosophila melanogaster
-
S.R
-
Adams MD, Celniker SE, Holt RA, Evans CA, Gocayne JD, Amanatides PG, Scherer SE, Li PW, Hoskins RA, Galle RF, George RA, Lewis SE, S. R, Ashburner M, Henderson SN, Sutton GG, Wortman JR, Yandell MD, Zhang Q, Chen LX, Brandon RC, Rogers YHC, Blazej RG, Champe M, Pfiffer BD, Wan KH, Doyle C, Baxter EG, Helt G, Nelson CR, Miklos GLG, Abril JF, Agbayani A, An HJ, Andrews-Pfannkoch C, Baldwin D, Ballew RM, Basu A, Baxendale J, Bayraktaroglu L, Beasley EM, Beeson KY, Benos PV, Bernam BP, Bhandari D, Bolshakov S, Borkova D, Botchan MR, Bouck J, Brokstein P, Brottier P, Burtis KC, Busam DA, Butler H, Cadieu E, Center A, Candra I, Cherry JM, Cawley S, Dahlke C, Daenport LB, Davies P, de Pablos B, Delcher A, Deng Z, Days AD, Dew I, Dietz SM, Dodson K, Doup LE, Downes M, Dugan-Rocha S, Dunkov BC, Dunn P, Durbin KJ, Evangelista CC, Ferraz C, Ferriera S, Fleischmann W, Fosler C, Gabrielian AE, Garg NS, Gelbart WM, Glasser K, Glodek A, Gong F, Gorrell JH, Gu Z, Guan P, Harris M, Harris NL, Harvey D, Heiman TJ, Hernandez JR, Houck J, Hostin D, Houston KA, Howland TJ, Wei MH, et al. The genome sequence of Drosophila melanogaster. Science 2000, 287:2185-2195.
-
(2000)
Science
, vol.287
, pp. 2185-2195
-
-
Adams, M.D.1
Celniker, S.E.2
Holt, R.A.3
Evans, C.A.4
Gocayne, J.D.5
Amanatides, P.G.6
Scherer, S.E.7
Li, P.W.8
Hoskins, R.A.9
Galle, R.F.10
George, R.A.11
Lewis, S.E.12
Ashburner, M.13
Henderson, S.N.14
Sutton, G.G.15
Wortman, J.R.16
Yandell, M.D.17
Zhang, Q.18
Chen, L.X.19
Brandon, R.C.20
Rogers, Y.H.C.21
Blazej, R.G.22
Champe, M.23
Pfiffer, B.D.24
Wan, K.H.25
Doyle, C.26
Baxter, E.G.27
Helt, G.28
Nelson, C.R.29
Miklos, G.L.G.30
Abril, J.F.31
Agbayani, A.32
An, H.J.33
Andrews-Pfannkoch, C.34
Baldwin, D.35
Ballew, R.M.36
Basu, A.37
Baxendale, J.38
Bayraktaroglu, L.39
Beasley, E.M.40
Beeson, K.Y.41
Benos, P.V.42
Bernam, B.P.43
Bhandari, D.44
Bolshakov, S.45
Borkova, D.46
Botchan, M.R.47
Bouck, J.48
Brokstein, P.49
Brottier, P.50
Burtis, K.C.51
Busam, D.A.52
Butler, H.53
Cadieu, E.54
Center, A.55
Candra, I.56
Cherry, J.M.57
Cawley, S.58
Dahlke, C.59
Daenport, L.B.60
Davies, P.61
de Pablos, B.62
Delcher, A.63
Deng, Z.64
Days, A.D.65
Dew, I.66
Dietz, S.M.67
Dodson, K.68
Doup, L.E.69
Downes, M.70
Dugan-Rocha, S.71
Dunkov, B.C.72
Dunn, P.73
Durbin, K.J.74
Evangelista, C.C.75
Ferraz, C.76
Ferriera, S.77
Fleischmann, W.78
Fosler, C.79
Gabrielian, A.E.80
Garg, N.S.81
Gelbart, W.M.82
Glasser, K.83
Glodek, A.84
Gong, F.85
Gorrell, J.H.86
Gu, Z.87
Guan, P.88
Harris, M.89
Harris, N.L.90
Harvey, D.91
Heiman, T.J.92
Hernandez, J.R.93
Houck, J.94
Hostin, D.95
Houston, K.A.96
Howland, T.J.97
Wei, M.H.98
more..
-
2
-
-
10344265019
-
A draft sequence for the genome of the domesticated silkworm (Bombyx mori)
-
Biology analysis group: Genome analysis group:
-
Biology analysis group: Xia Q, Zhou Z, Lu C, Cheng D, Dai F, Li B, Zhao P, Zha X, Cheng T, Chai C, Pan G, Xu J, Liu C, Lin Y, Qian J, Hou Y, Wu Z, Li G, Pan M, Li C, Shen Y, Lan X, Yuan L, Li T, Xu H, Yang G, Wan Y, Zhu Y, Yu M, Shen W, Wu D, Xiang Z, Genome analysis group: Yu J, Wang J, Li R, Shi J, Li H, Li G, Su J, Wang X, Li G, Zhang Z, Wu Q, Li J, Zhang Q, Wei N, Xu J, Sun H, Dong L, Liu D, Zhao S, Zhao X, Meng Q, Lan F, Huang X, Li Y, Fang L, Li C, Li D, Sun Y, Zhang Z, Yang Z, Huang Y, Xi Y, Qi Q, He D, Huang H, Zhang X, Xi Y, Qi R, He D, Huang H, Zhang X, Wang Z, Li W, Cao Y, Yu Y, Yu H, Li J, Ye J, Chen H, Zhou Y, Liu B, Wang J, Ye J, Ji H, Li S, Ni P, Zhang J, Zhang Y, Zheng H, Mao B, Wang W, Ye C, Li S, Wang J, Wong GKS, Yang H: A draft sequence for the genome of the domesticated silkworm (Bombyx mori). Science 2004, 306:1937-1940.
-
(2004)
Science
, vol.306
, pp. 1937-1940
-
-
Xia, Q.1
Zhou, Z.2
Lu, C.3
Cheng, D.4
Dai, F.5
Li, B.6
Zhao, P.7
Zha, X.8
Cheng, T.9
Chai, C.10
Pan, G.11
Xu, J.12
Liu, C.13
Lin, Y.14
Qian, J.15
Hou, Y.16
Wu, Z.17
Li, G.18
Pan, M.19
Li, C.20
Shen, Y.21
Lan, X.22
Yuan, L.23
Li, T.24
Xu, H.25
Yang, G.26
Wan, Y.27
Zhu, Y.28
Yu, M.29
Shen, W.30
Wu, D.31
Xiang, Z.32
Yu, J.33
Wang, J.34
Li, R.35
Shi, J.36
Li, H.37
Li, G.38
Su, J.39
Wang, X.40
Li, G.41
Zhang, Z.42
Wu, Q.43
Li, J.44
Zhang, Q.45
Wei, N.46
Xu, J.47
Sun, H.48
Dong, L.49
Liu, D.50
Zhao, S.51
Zhao, X.52
Meng, Q.53
Lan, F.54
Huang, X.55
Li, Y.56
Fang, L.57
Li, C.58
Li, D.59
Sun, Y.60
Zhang, Z.61
Yang, Z.62
Huang, Y.63
Xi, Y.64
Qi, Q.65
He, D.66
Huang, H.67
Zhang, X.68
Xi, Y.69
Qi, R.70
He, D.71
Huang, H.72
Zhang, X.73
Wang, Z.74
Li, W.75
Cao, Y.76
Yu, Y.77
Yu, H.78
Li, J.79
Ye, J.80
Chen, H.81
Zhou, Y.82
Liu, B.83
Wang, J.84
Ye, J.85
Ji, H.86
Li, S.87
Ni, P.88
Zhang, J.89
Zhang, Y.90
Zheng, H.91
Mao, B.92
Wang, W.93
Ye, C.94
Li, S.95
Wang, J.96
Wong, G.K.S.97
Yang, H.98
more..
-
3
-
-
0037020114
-
The genome sequence of the malaria mosquito Anopheles gambiae
-
Holt RA, Subramanian GM, Halpern A, Sutton GG, Charlab R, Nusskem DR, Wincker P, Clark AG, Ribeiro JM, Wides R, Salzberg SL, Loftus B, Yandell M, Majoros WH, Rusch DB, Lai Z, Kraft CL, Abril JF, Anthouard V, Arensburger P, Atkinson PW, Baden H, de Berardinis V, Baldwin D, Benes V, Biedler J, Blass C, Bolanos R, Boscus D, Barnstead M, Cai S, Center A, Chaturvedi K, Christophides GK, Chrystal MA, Clamp M, Cravchik A, Curwen V, Dana A, Delcher A, Dew I, Evans CA, Flanigan M, Grundschober-Freimoser A, Friedli L, Gu Z, Guan P, Guigo R, Hilllenmeyer ME, Hladun SL, Hogan JR, Hong YS, Hoover J, Jaillon O, Ke Z, Kodira C, Kokoza E, Koutsos A, Letunic I, Levitsky A, Liang Y, Lin JJ, Lobo NF, Lopez JR, Malek JA, McIntosh TC, Meister S, Miller J, Mobarry C, Mongin E, Murphy SD, O'Brochta DA, Pfannkoch C, Qi R, Regier MA, Remington K, Shao H, Sharakhova MV, Sitter CD, Shetty J, Smith TJ, Strong R, Sun J, Thomasova D, Ton LQ, Topalis P, Tu Z, Unger MF, Walenz B, Wang A, Wang J, Wang M, Wang X, Woodford KJ, Wortman JR, Wu M, Yao A, Zdobnov EM, Zhang H, et al. The genome sequence of the malaria mosquito Anopheles gambiae. Science 2002, 298:129-149.
-
(2002)
Science
, vol.298
, pp. 129-149
-
-
Holt, R.A.1
Subramanian, G.M.2
Halpern, A.3
Sutton, G.G.4
Charlab, R.5
Nusskem, D.R.6
Wincker, P.7
Clark, A.G.8
Ribeiro, J.M.9
Wides, R.10
Salzberg, S.L.11
Loftus, B.12
Yandell, M.13
Majoros, W.H.14
Rusch, D.B.15
Lai, Z.16
Kraft, C.L.17
Abril, J.F.18
Anthouard, V.19
Arensburger, P.20
Atkinson, P.W.21
Baden, H.22
de Berardinis, V.23
Baldwin, D.24
Benes, V.25
Biedler, J.26
Blass, C.27
Bolanos, R.28
Boscus, D.29
Barnstead, M.30
Cai, S.31
Center, A.32
Chaturvedi, K.33
Christophides, G.K.34
Chrystal, M.A.35
Clamp, M.36
Cravchik, A.37
Curwen, V.38
Dana, A.39
Delcher, A.40
Dew, I.41
Evans, C.A.42
Flanigan, M.43
Grundschober-Freimoser, A.44
Friedli, L.45
Gu, Z.46
Guan, P.47
Guigo, R.48
Hilllenmeyer, M.E.49
Hladun, S.L.50
Hogan, J.R.51
Hong, Y.S.52
Hoover, J.53
Jaillon, O.54
Ke, Z.55
Kodira, C.56
Kokoza, E.57
Koutsos, A.58
Letunic, I.59
Levitsky, A.60
Liang, Y.61
Lin, J.J.62
Lobo, N.F.63
Lopez, J.R.64
Malek, J.A.65
McIntosh, T.C.66
Meister, S.67
Miller, J.68
Mobarry, C.69
Mongin, E.70
Murphy, S.D.71
O'Brochta, D.A.72
Pfannkoch, C.73
Qi, R.74
Regier, M.A.75
Remington, K.76
Shao, H.77
Sharakhova, M.V.78
Sitter, C.D.79
Shetty, J.80
Smith, T.J.81
Strong, R.82
Sun, J.83
Thomasova, D.84
Ton, L.Q.85
Topalis, P.86
Tu, Z.87
Unger, M.F.88
Walenz, B.89
Wang, A.90
Wang, J.91
Wang, M.92
Wang, X.93
Woodford, K.J.94
Wortman, J.R.95
Wu, M.96
Yao, A.97
Zdobnov, E.M.98
Zhang, H.99
more..
-
4
-
-
5144229657
-
The genome sequence of silkworm, Bombyx mori
-
Mita K, Kasahara M, Sasaki S, Nagayasu Y, Yamada T, Kanamori H, Namiki N, Kitagawa M, Yamashita H, Yasukochi Y, Kadono-Okuda K, Kamamoto K, Ajimura M, Ravikumar G, Shimomura M, Nagamura Y, Shin-i T, Abe H, Shimada T, Morishita S, Sasaki T: The genome sequence of silkworm, Bombyx mori. DNA Res 2004, 11:27-35.
-
(2004)
DNA Res
, vol.11
, pp. 27-35
-
-
Mita, K.1
Kasahara, M.2
Sasaki, S.3
Nagayasu, Y.4
Yamada, T.5
Kanamori, H.6
Namiki, N.7
Kitagawa, M.8
Yamashita, H.9
Yasukochi, Y.10
Kadono-Okuda, K.11
Kamamoto, K.12
Ajimura, M.13
Ravikumar, G.14
Shimomura, M.15
Nagamura, Y.16
Shin-i, T.17
Abe, H.18
Shimada, T.19
Morishita, S.20
Sasaki, T.21
more..
-
5
-
-
84872266047
-
-
Project HBG
-
Project HBG: [http://www.hgsc.bcm.tmc.edu/projects/honeybee/].
-
-
-
-
6
-
-
0017475358
-
The establishment of two cell lines from the insect Spodoptera frugiperda (Lepidoptera: Noctuidae)
-
Vaughn JL, Goodwin RH, Tompkins GJ, McCawley P: The establishment of two cell lines from the insect Spodoptera frugiperda (Lepidoptera: Noctuidae). In Vitro 1977, 13:213-217.
-
(1977)
In Vitro
, vol.13
, pp. 213-217
-
-
Vaughn, J.L.1
Goodwin, R.H.2
Tompkins, G.J.3
McCawley, P.4
-
7
-
-
0032849859
-
CAP3: A DNA Sequence Assembly Program
-
Huang X, Madan A: CAP3: A DNA Sequence Assembly Program. Genome Research 1999, 9:868-877.
-
(1999)
Genome Research
, vol.9
, pp. 868-877
-
-
Huang, X.1
Madan, A.2
-
8
-
-
0030872838
-
PolyPhred: Automating the detection and genotyping of single nucleotide substitutions using fluorescence-based resequencing
-
Nickerson DA, Tobe VO, Taylor SL: PolyPhred: automating the detection and genotyping of single nucleotide substitutions using fluorescence-based resequencing. Nucleic Acids Res 1997, 25:2745-2751.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 2745-2751
-
-
Nickerson, D.A.1
Tobe, V.O.2
Taylor, S.L.3
-
9
-
-
84872266015
-
-
database ESTMD
-
database ESTMD: [http://www.bioinformatics.ksu.edu:8080/estweb/ index.html].
-
-
-
-
10
-
-
0026492761
-
Sequence evolution in mitochondrial ribosomal and ND-1 genes in Lepidoptera: Implications for phylogenetic analyses
-
Pashley DP, Ke LD: Sequence evolution in mitochondrial ribosomal and ND-1 genes in Lepidoptera: Implications for phylogenetic analyses. Mol Biol Evol 1992, 9:1061-1075.
-
(1992)
Mol Biol Evol
, vol.9
, pp. 1061-1075
-
-
Pashley, D.P.1
Ke, L.D.2
-
11
-
-
0002636459
-
Annotation of the Drosophila melanogaster euchromatic genome: A systematic review
-
3:RESEARCH 0083.1-83.22
-
Misra S, Crosby MA, Mungall CJ, Matthews BB, Campbell KS, Hradecky P, Huang Y, Kaminker JS, Millburn GH, Prochnik SE, Smith CD, Tupy JL, Whitfied EJ, Bayraktaroglu L, Berman BP, Bettencourt BR, Celniker SE, de Grey AD, Drysdale RA, Harris NL, Richter J, Russo S, Schroeder AJ, Shu SQ, Stapleton M, Yamada C, Ashburner M, Gelbart WM, Rubin GM, Lewis SE: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review. Genome Biol 2002, 3:RESEARCH 0083.1-83.22.
-
(2002)
Genome Biol
-
-
Misra, S.1
Crosby, M.A.2
Mungall, C.J.3
Matthews, B.B.4
Campbell, K.S.5
Hradecky, P.6
Huang, Y.7
Kaminker, J.S.8
Millburn, G.H.9
Prochnik, S.E.10
Smith, C.D.11
Tupy, J.L.12
Whitfied, E.J.13
Bayraktaroglu, L.14
Berman, B.P.15
Bettencourt, B.R.16
Celniker, S.E.17
de Grey, A.D.18
Drysdale, R.A.19
Harris, N.L.20
Richter, J.21
Russo, S.22
Schroeder, A.J.23
Shu, S.Q.24
Stapleton, M.25
Yamada, C.26
Ashburner, M.27
Gelbart, W.M.28
Rubin, G.M.29
Lewis, S.E.30
more..
-
12
-
-
0242291313
-
Annotation pattern of ESTs from Spodoptera frugiperda Sf9 cells and analysis of the ribosomal protein genes reveal insect-specific features and unexpectedly low codon bias
-
Landais I, Oligastro M, Mita K, Nohata J, López-Ferber M, Duonor-Cerutti M, Shimada T, Fournier P, Devauchelle G: Annotation pattern of ESTs from Spodoptera frugiperda Sf9 cells and analysis of the ribosomal protein genes reveal insect-specific features and unexpectedly low codon bias. Bioinformatics 2003, 19:2343-2350.
-
(2003)
Bioinformatics
, vol.19
, pp. 2343-2350
-
-
Landais, I.1
Oligastro, M.2
Mita, K.3
Nohata, J.4
López-Ferber, M.5
Duonor-Cerutti, M.6
Shimada, T.7
Fournier, P.8
Devauchelle, G.9
-
13
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ: Basic local alignment search tool. J Mol Biol 1990, 215:403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
14
-
-
84872263215
-
-
Genomes BLASTSAS
-
Genomes BLASTSAS: [http://pistil.ab.a.u-tokyo.ac.jp/kanzen/blast.html].
-
-
-
-
15
-
-
0034069495
-
Gene ontology: Tool for the unification of biology
-
The Gene Ontology Consortium
-
Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, Harris MA, Hill DP, Issel-Tarver L, Kasarskis A, Lewis S, Matese JC, Richardson JE, Ringwald M, Rubin GM, Sherlock G: Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 2000, 25:25-29.
-
(2000)
Nat Genet
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
Cherry, J.M.6
Davis, A.P.7
Dolinski, K.8
Dwight, S.S.9
Eppig, J.T.10
Harris, M.A.11
Hill, D.P.12
Issel-Tarver, L.13
Kasarskis, A.14
Lewis, S.15
Matese, J.C.16
Richardson, J.E.17
Ringwald, M.18
Rubin, G.M.19
Sherlock, G.20
more..
-
16
-
-
0036230465
-
Annotated expressed sequence tags and cDNA microarrays for studies of brain and behavior in the honey bee
-
Whitfield CW, Band MR, Bonaldo MF, Kumar CG, Liu L, Pardinas JR, Robertson HM, Soares MB, Robinson GE: Annotated expressed sequence tags and cDNA microarrays for studies of brain and behavior in the honey bee. Genome Res 2002, 12:555-566.
-
(2002)
Genome Res
, vol.12
, pp. 555-566
-
-
Whitfield, C.W.1
Band, M.R.2
Bonaldo, M.F.3
Kumar, C.G.4
Liu, L.5
Pardinas, J.R.6
Robertson, H.M.7
Soares, M.B.8
Robinson, G.E.9
-
17
-
-
0032919364
-
KEGG: Kyoto Encyclopedia of Genes and Genomes
-
Ogata H, Goto S, Sato K, Fujibuchi W, Bono H, Kanehisa M: KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Res 1999, 27:29-34.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 29-34
-
-
Ogata, H.1
Goto, S.2
Sato, K.3
Fujibuchi, W.4
Bono, H.5
Kanehisa, M.6
-
18
-
-
84872263145
-
-
Spodobase
-
Spodobase: [http://bioweb.ensam.inra.fr/spodobase/].
-
-
-
-
19
-
-
28044457006
-
High-efficiency transformation of Plasmodium falciparum by the lepidopteran transposable element piggyBac
-
Balu B, Shoue DA, Fraser Jr. MJ, Adams JH: High-efficiency transformation of Plasmodium falciparum by the lepidopteran transposable element piggyBac. Proc Natl Acad Sci USA 2005, 102:16391-16396.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 16391-16396
-
-
Balu, B.1
Shoue, D.A.2
Fraser Jr., M.J.3
Adams, J.H.4
-
20
-
-
23744479962
-
Efficient transposition of the piggyBac (PB) transposon in mammalian cells and mice
-
Ding S, Wu X, Li G, Han M, Zhuang Y, Xu T: Efficient transposition of the piggyBac (PB) transposon in mammalian cells and mice. Cell 2005, 122:473-483.
-
(2005)
Cell
, vol.122
, pp. 473-483
-
-
Ding, S.1
Wu, X.2
Li, G.3
Han, M.4
Zhuang, Y.5
Xu, T.6
-
22
-
-
4544333981
-
piggyBac-mediated somatic transformation of the two-spotted cricket, Gryllus bimaculatus
-
Shinmyo Y, Mito T, Matsushita T, Sarashina I, Miyawaki K, Ohuchi H, Noji S: piggyBac-mediated somatic transformation of the two-spotted cricket, Gryllus bimaculatus. Dev Growth Differ 2004, 46:343-349.
-
(2004)
Dev Growth Differ
, vol.46
, pp. 343-349
-
-
Shinmyo, Y.1
Mito, T.2
Matsushita, T.3
Sarashina, I.4
Miyawaki, K.5
Ohuchi, H.6
Noji, S.7
-
23
-
-
0035999907
-
Hemolin gene silencing by ds-RNA injected into Cecropia pupae is lethal to next generation embryos
-
Bettencourt R, Terenius O, Faye I: Hemolin gene silencing by ds-RNA injected into Cecropia pupae is lethal to next generation embryos. Insect Mol Biol 2002, 11:267-271.
-
(2002)
Insect Mol Biol
, vol.11
, pp. 267-271
-
-
Bettencourt, R.1
Terenius, O.2
Faye, I.3
-
24
-
-
0031978181
-
Base-calling of automated sequencer traces using phred. II. Error probabilites
-
Ewing B, Green P: Base-calling of automated sequencer traces using phred. II. Error probabilites. Genome Res 1998, 8:186-194.
-
(1998)
Genome Res
, vol.8
, pp. 186-194
-
-
Ewing, B.1
Green, P.2
-
25
-
-
84872277592
-
-
Crossmatch
-
Crossmatch: [http://www.sanger.ac.uk/Software/].
-
-
-
-
26
-
-
0036137277
-
DNA sequence quality trimming and vector removal
-
Chou HH, Holmes MH: DNA sequence quality trimming and vector removal. Bioinformatics 2001, 17:1093-1104.
-
(2001)
Bioinformatics
, vol.17
, pp. 1093-1104
-
-
Chou, H.H.1
Holmes, M.H.2
-
27
-
-
84872276922
-
-
RepeatMasker
-
RepeatMasker: [http://ftp.genome.washington.edu/].
-
-
-
-
28
-
-
0003450992
-
Enzyme nomenclature: Recomendations of the nomenclature committee of the international union of biochemistry and molecular biology
-
IUBMB San Diego, Academic Press
-
IUBMB: Enzyme nomenclature: Recomendations of the nomenclature committee of the international union of biochemistry and molecular biology. San Diego, Academic Press; 1992.
-
(1992)
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-
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