Genetic algorithm-based virtual screening of combinative mode for peptide/protein

Acta Chimica Sinica

Volumn 64, Issue 7, 2006, Pages 691-697

  Zhou, Peng ^a,b   Tian, Fei Fei ^a,c   Li, Bo ^a   Wu, Shi Rong ^a   Li, Zhi Liang ^a,b,c  

^a CHONGQING UNIVERSITY   (China)

^b State Key Laboratory of Chemo/Biosensing and Chemometrics   (China)

^c BEIJING UNIVERSITY OF POSTS AND TELECOMMUNICATIONS   (China)

Author keywords

Genetic algorithm; Genetic virtual screening of combinative mode of peptide protein; Partial least square regression; Quantitative structure activity relationship

Indexed keywords

EID: 33750452703     PISSN: 05677351     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (25)

1. Hellberg, S.; Sjostrom, M.; Wold, S. Acta Chem. Scand. 1986, 40, 135.
2. Hellberg, S.; Sjostrom, M.; Skagerberg, B.; Wold, S. J. Med. Chem. 1987, 30, 1126.
3. Collantes, E. R.; Dunn, W. J. J. Med. Chem. 1995, 38, 2705.
4. Zaliani, A.; Gancia, E. J. Chem. Inf. Comput. Sci. 1999, 39, 525.
5. Geysen, H. M.; Rodda, S. J.; Mason, T. J. Mol. Immunol. 1986, 23, 709.
6. Cramer, R. D.; Patterson, D. E.; Bunce, J. D. J. Am. Chem. Soc. 1988, 110, 5959.
7. Kellogg, G. E.; Semus, S. F.; Abraham, D. J. J. Comput.-Aided Mol. Des. 1991, 5, 545.
8. Nayak, V. R.; Kellogg, G. E. Med. Chem. Res. 1994, 3, 491.
9. Welch, W.; Sutko, J. L.; Mitchell, K. E.; Airey, J.; Ruest, L. Biochemistry 1996, 35, 7165.
10. Rose, G. D.; Geselowitz, A. R.; Lesser, G. J.; Lee, R. H.; Zehfus, M. H. Science 1985, 229, 834.
11. Eisenberg, D.; McLachlan, A. D. Nature 1986, 319, 199.
12. Weiner, S. J.; Kollman, P. A.; Case, D. A.; Singh, U. C.; Ghio, C.; Alagona, G.; Profeta, S.; Weinerl, P. J. Am. Chem. Soc. 1984, 106, 765.
13. Raevsky, O. A.; Sapegin, A.; Zefirov, N. Quant. Struct.-Act. Relat. 1994, 13, 412.
14. Raevsky, O. A. J. Phys. Org. Chem. 1997, 10, 405.
15. Holland, J. H. Adaptation in Natural and Artificial System, University of Michigan Press, Ann Arbor, 1975.
16. Wold, S.; Ruhe, A.; Wold, H.; Dunn, W. J. Siam J. Sci. Statist. Comput. 1984, 5, 735.
17. Hassall, C. H.; Kroehn, A.; Moody, C. J.; Thomas, W. A. J. Chem. Soc., Perkin Trans. 1 1984, (2), 155.
18. DePriest, S. A.; Mayer, D.; Naylor, C. B.; Marshall, G. R. J. Am. Chem. Soc. 1993, 115, 5372.
19. Hellberg, S.; Eriksson, L.; Jonsson, J.; Lindgren, F.; Sjostrom, M.; Skagerberg, B.; Wold, S.; Andrews, P. Int. J. Pept. Protein Res. 1991, 37, 414.
20. Cocchi, M.; Johansson, E. Quant. Struct.-Act. Relat. 1993, 12, 1.
21. Transue, T. R.; Genst, E. D.; Ghahroudi, M. A.; Wyns, L.; Muyldermans, S. Proteins 1998, 32, 515.
22. Desmyter, A.; Transue, T. R.; Ghahroudi, M. A.; Thi, M. H.; Poortmans, F.; Hamers, R.; Muyldermans, S.; Wyns, L. Nat. Struct. Biol. 1996, 3, 803.
23. Genst, D.; Areskoug, E. D.; Decanniere, K.; Muyldermans, S.; Andersson, K. J. Biol. Chem. 2002, 277, 29897.
24. Freyhult, E. K.; Andersson, K.; Gustafssonz, M. G. Biophys. J. 2003, 84, 2264.
25. Sandberg, M.; Eriksson, L.; Jonsson, J.; Sjöström, M.; Wold, S. J. Med. Chem. 1998, 41, 2481.