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Volumn 4216 LNBI, Issue , 2006, Pages 119-128

Beating the noise: New statistical methods for detecting signals in MALDI-TOF spectra below noise level

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHMS; BLOOD; CONCENTRATION (PROCESS); MASS SPECTROMETRY; PROTEINS; SPURIOUS SIGNAL NOISE;

EID: 33750303072     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/11875741_12     Document Type: Conference Paper
Times cited : (13)

References (30)
  • 1
    • 28444478097 scopus 로고    scopus 로고
    • Characterization of serum biomarkers for detection of early stage ovarian cancer
    • Nov
    • K. R. Kozak, F. Su, J. P. Whitelegge, K. Faull, S. Reddy, and R. Farias-Eisner. Characterization of serum biomarkers for detection of early stage ovarian cancer. Proteomics, 5(17):4589-4596, Nov 2005.
    • (2005) Proteomics , vol.5 , Issue.17 , pp. 4589-4596
    • Kozak, K.R.1    Su, F.2    Whitelegge, J.P.3    Faull, K.4    Reddy, S.5    Farias-Eisner, R.6
  • 2
    • 16544370448 scopus 로고    scopus 로고
    • Surfaced-enhanced laser desorption/ionization time-of-flight (SELDI-TOF) differentiation of serum protein profiles of BRCA-1 and sporadic breast cancer
    • Oct
    • S. Becker, L. H. Cazares, P. Watson, H. Lynch, O. J. Semmes, R. R. Drake, and C. Laronga. Surfaced-enhanced laser desorption/ionization time-of-flight (SELDI-TOF) differentiation of serum protein profiles of BRCA-1 and sporadic breast cancer. Ann Surg Oncol, 11(10):907-914, Oct 2004.
    • (2004) Ann Surg Oncol , vol.11 , Issue.10 , pp. 907-914
    • Becker, S.1    Cazares, L.H.2    Watson, P.3    Lynch, H.4    Semmes, O.J.5    Drake, R.R.6    Laronga, C.7
  • 3
    • 19644386500 scopus 로고    scopus 로고
    • Standardized approach to proteome profiling of human serum based on magnetic bead separation and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
    • Jun
    • S. Baumann, U. Ceglarek, G. M. Fiedler, J. Lembcke, A. Leichtle, and J. Thiery. Standardized approach to proteome profiling of human serum based on magnetic bead separation and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Clin Chem, 51(6):973-980, Jun 2005.
    • (2005) Clin Chem , vol.51 , Issue.6 , pp. 973-980
    • Baumann, S.1    Ceglarek, U.2    Fiedler, G.M.3    Lembcke, J.4    Leichtle, A.5    Thiery, J.6
  • 4
    • 33745442821 scopus 로고    scopus 로고
    • The MALDI TOF mass spectrometric view of the plasma proteome and peptidome
    • Apr
    • Glen L Hortin. The MALDI TOF Mass Spectrometric View of the Plasma Proteome and Peptidome. Clin Chem, Apr 2006.
    • (2006) Clin Chem
    • Hortin, G.L.1
  • 5
    • 0033948589 scopus 로고    scopus 로고
    • Automatic poisson peak harvesting for high throughput protein identification
    • E. J. Breen, F. G. Hopwood, K. L. Williams, and M. R. Wilkins. Automatic poisson peak harvesting for high throughput protein identification. Electrophoresis, 21(11):2243 - 2251, 2000.
    • (2000) Electrophoresis , vol.21 , Issue.11 , pp. 2243-2251
    • Breen, E.J.1    Hopwood, F.G.2    Williams, K.L.3    Wilkins, M.R.4
  • 6
    • 11144265071 scopus 로고    scopus 로고
    • Normalization, baseline correction and alignment of high-throughput mass spectrometry data
    • A. C. Sauve and T. P. Speed. Normalization, baseline correction and alignment of high-throughput mass spectrometry data. In Procedings Gensips 2004, 2004.
    • (2004) Procedings Gensips 2004
    • Sauve, A.C.1    Speed, T.P.2
  • 9
    • 0141631754 scopus 로고    scopus 로고
    • Protocols for disease classification from mass spectrometry data
    • Sep
    • M. Wagner, D. Naik, and A. Pothen. Protocols for disease classification from mass spectrometry data. Proteomics, 3(9): 1692-1698, Sep 2003.
    • (2003) Proteomics , vol.3 , Issue.9 , pp. 1692-1698
    • Wagner, M.1    Naik, D.2    Pothen, A.3
  • 12
    • 0001259658 scopus 로고
    • The stationary wavelet transform and some statistical applications
    • G. P. Nason and B. W. Silverman. The stationary wavelet transform and some statistical applications. In Lecture Notes in Statistics, volume 103, pages 281-300, 1995.
    • (1995) Lecture Notes in Statistics , vol.103 , pp. 281-300
    • Nason, G.P.1    Silverman, B.W.2
  • 14
    • 4444234496 scopus 로고    scopus 로고
    • Data mining techniques for cancer detection using serum proteomic profiling
    • Oct
    • L. Li, H. Tang, Z. Wu, J. Gong, M. Gruidl, J. Zou, M. Tockman, and R. A. Clark. Data mining techniques for cancer detection using serum proteomic profiling. Artif Intell Med, 32(2):71-83, Oct 2004.
    • (2004) Artif Intell Med , vol.32 , Issue.2 , pp. 71-83
    • Li, L.1    Tang, H.2    Wu, Z.3    Gong, J.4    Gruidl, M.5    Zou, J.6    Tockman, M.7    Clark, R.A.8
  • 16
    • 0036130648 scopus 로고    scopus 로고
    • ProteinChip clinical proteomics: Computational challenges and solutions
    • Mar
    • E. T. Fung and C. Enderwick. ProteinChip clinical proteomics: computational challenges and solutions. Biotechniques, Suppl:34-8, 40-1, Mar 2002.
    • (2002) Biotechniques , Issue.SUPPL. , pp. 34-38
    • Fung, E.T.1    Enderwick, C.2
  • 17
    • 0141855279 scopus 로고    scopus 로고
    • A comprehensive approach to the analysis of matrix-assisted laser desorption/ionization-time of flight proteomics spectra from serum samples
    • Sep
    • K. A. Baggerly, J. S. Morris, J. Wang, D. Gold, L.-C. Xiao, and K. R. Coombes. A comprehensive approach to the analysis of matrix-assisted laser desorption/ionization-time of flight proteomics spectra from serum samples. Proteomics, 3(9): 1667-1672, Sep 2003.
    • (2003) Proteomics , vol.3 , Issue.9 , pp. 1667-1672
    • Baggerly, K.A.1    Morris, J.S.2    Wang, J.3    Gold, D.4    Xiao, L.-C.5    Coombes, K.R.6
  • 20
    • 0037317897 scopus 로고    scopus 로고
    • Efficient greedy learning of gaussian mixture models
    • Feb
    • J. J. Verbeek, N. Vlassis, and B. Kröse. Efficient greedy learning of gaussian mixture models. Neural Comput, 15(2):469-485, Feb 2003.
    • (2003) Neural Comput , vol.15 , Issue.2 , pp. 469-485
    • Verbeek, J.J.1    Vlassis, N.2    Kröse, B.3
  • 24
    • 10244279272 scopus 로고    scopus 로고
    • Sample classification from protein mass spectrometry, by 'peak probability contrasts'
    • Nov
    • R. Tibshirani, T. Hastie, B. Narasimhan, S. Soltys, G. Shi, A. Koong, and Q.-T. Le. Sample classification from protein mass spectrometry, by 'peak probability contrasts'. Bioinformatics, 20(17):3034-3044, Nov 2004.
    • (2004) Bioinformatics , vol.20 , Issue.17 , pp. 3034-3044
    • Tibshirani, R.1    Hastie, T.2    Narasimhan, B.3    Soltys, S.4    Shi, G.5    Koong, A.6    Le, Q.-T.7
  • 25
    • 0001120413 scopus 로고
    • A bayesian analysis of some nonparametric problems
    • T. S. Ferguson. A bayesian analysis of some nonparametric problems. The Annals of Statistics, 1:209-230, 1973.
    • (1973) The Annals of Statistics , vol.1 , pp. 209-230
    • Ferguson, T.S.1
  • 26
    • 0002617436 scopus 로고
    • Ferguson distributions via polya urn schemes
    • D. Blackwell and J. MacQueen. Ferguson distributions via polya urn schemes. The Annals of Statistics, 1:353-355, 1973.
    • (1973) The Annals of Statistics , vol.1 , pp. 353-355
    • Blackwell, D.1    MacQueen, J.2
  • 28
    • 0346338291 scopus 로고    scopus 로고
    • Generalized weighted Chinese restaurant process for species sampling mixture models
    • H. Ishwaran and L. F. James. Generalized weighted Chinese restaurant process for species sampling mixture models. Statistica Sinica, 3:1211-1235, 2003.
    • (2003) Statistica Sinica , vol.3 , pp. 1211-1235
    • Ishwaran, H.1    James, L.F.2
  • 29
    • 33747844071 scopus 로고    scopus 로고
    • Weighted Chinese restaurant processes
    • World Scientific Publishing Company
    • A. Y. Lo. Weighted Chinese restaurant processes. Cosmos, 1(1):107-111, 2005. World Scientific Publishing Company.
    • (2005) Cosmos , vol.1 , Issue.1 , pp. 107-111
    • Lo, A.Y.1
  • 30
    • 18844434645 scopus 로고    scopus 로고
    • Density estimation
    • S. J. Scheather. Density estimation. Statistical Science, 19(4):588-597, 2004.
    • (2004) Statistical Science , vol.19 , Issue.4 , pp. 588-597
    • Scheather, S.J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.