Photolyase confers resistance to UV light but does not contribute to the symbiotic benefit of bioluminescence in Vibrio fischeri ES114

Applied and Environmental Microbiology

Volumn 72, Issue 10, 2006, Pages 6600-6606

  Walker, Emma L ^a   Bose, Jeffrey L ^a   Stabb, Eric V ^a  

^a UNIVERSITY OF GEORGIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLUMINESCENCE; CELL CULTURE; DNA; MATHEMATICAL MODELS; ULTRAVIOLET RADIATION;

N-3-OXO-HEXANOYL HOMOSERINE LACTONE; PHOTOLYASE; VIBRIO FISCHERI ES114;

ENZYME KINETICS;

AMPICILLIN; CHLORAMPHENICOL; DEOXYRIBODIPYRIMIDINE PHOTOLYASE; ERYTHROMYCIN; KANAMYCIN;

BACTERIUM; BIOLUMINESCENCE; ENZYME; LIGHT; ULTRAVIOLET RADIATION;

ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIAL COLONIZATION; BACTERIAL GENE; BACTERIAL STRAIN; BIOLUMINESCENCE; DNA DAMAGE; DNA REPAIR; ENZYME ACTIVITY; ENZYME ANALYSIS; GENETIC CODE; HOST; NONHUMAN; PHOTOSTIMULATION; PHR GENE; SYMBIOSIS; ULTRAVIOLET RADIATION; VIBRIO FISCHERI;

DEOXYRIBODIPYRIMIDINE PHOTO-LYASE; LUMINESCENT PROTEINS; MOLECULAR SEQUENCE DATA; PHOTOBACTERIUM; RADIATION TOLERANCE; SYMBIOSIS; ULTRAVIOLET RAYS; VIBRIO FISCHERI;

BACTERIA (MICROORGANISMS); EUPRYMNA SCOLOPES; VIBRIO FISCHERI;

EID: 33750081115     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.01272-06     Document Type: Article

References (43)

1. Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
2. Atkins, W. R. G., and H. H. Poole. 1933. The photo-electric measurement of the penetration of light of various wave-lengths into the sea and the physiological bearing of the results. Phil. Trans. R. Soc. Lond. B 222:129-164.
3. Boettcher, K. J., and E. G. Ruby. 1990. Depressed light emission by symbiotic Vibrio fischeri of the sepiolid squid Euprymna scolopes. J. Bacteriol. 172:3701-3706.
4. Boettcher, K. J., and E. G. Ruby. 1995. Detection and quantification of Vibrio fischeri autoinducer from symbiotic squid light organs. J. Bacteriol. 177:1053-1058.
5. Bourgois, J.-J., F. E. Sluse, F. Baguet, and J. Mallefet. 2001. Kinetics of light emission and oxygen consumption by bioluminescent bacteria. J. Bioenerg. Biomembr. 33:353-363.
6. Chen, C. Y., K. M. Wu, Y. C. Chang, C. H. Chang, H. C. Tsai, T. L. Liao, Y. M. Liu, H. J. Chen, A. B. Shen, J. C. Li, T. L. Su, C. P. Shao, C. T. Lee, L. I. Hor, and S. F. Tsai. 2003. Comparative genome analysis of Vibrio vulnificus, a marine pathogen. Genome Res. 13:2577-2587.
7. Czyz, A., K. Plata, and G. Wegrzyn. 2002. Induction of light emission by luminescent bacteria treated with UV light and chemical mutagens. J. Appl. Genet. 43:377-389.
8. Czyz, A., K. Plata, and G. Wegrzyn. 2003. Stimulation of DNA repair as an evolutionary drive for bacterial bioluminescence. Luminescence 18:140-144.
9. Czyz, A., B. Wrobel, and G. Wegrzyn. 2000. Vibrio harveyi bioluminescence plays a role in stimulation of DNA repair. Microbiology 146:283-288.
10. Dunn, A. K., M. O. Martin, and E. V. Stabb. 2005. Characterization of pES213, a small mobilizable plasmid from Vibrio fischeri. Plasmid 54:114-134.
11. Dunn, A. K., D. S. Millikan, D. M. Adin, J. L. Bose, and E. V. Stabb. 2006. New rfp- and pES213-derived tools for analyzing symbiotic Vibrio fischeri reveal patterns of infection and lux expression in situ. Appl. Environ. Microbiol. 72:802-810.
12. Eker, A. P. M., P. Kooiman, J. K. C. Hessels, and A. Yasui. 1990. DNA photoreactivating enzyme from the cyanobacterium Anacystis nidulans. J. Biol. Chem. 265:8009-8015.
13. Franklin, M. P., I. R. McDonald, D. G. Bourne, N. J. Owens, R. C. Upstill-Goddard, and J. C. Murrell. 2005. Bacterial diversity in the bacterioneuston (sea surface microlayer): the bacterioneuston through the looking glass. Environ. Microbiol. 7:723-736.
14. Hanahan, D. 1983. Studies on transformation of Escherichia coli with plasmids. J. Mol. Biol. 166:557-580.
15. Hastings, J. W., and K. H. Nealson. 1977. Bacterial bioluminescence. Annu. Rev. Microbiol. 31:549-595.
16. Hastings, J. W., W. H. Riley, and J. Massa. 1965. The purification, properties, and chemiluminescent quantum yield of bacterial luciferase. J. Biol. Chem. 240:1473-1481.
17. Heidelberg, J. F., J. A. Eisen, W. C. Nelson, R. A. Clayton, M. L. Gwinn, R. J. Dodson, D. H. Haft, E. K. Hickey, J. D. Peterson, L. Umayam, S. R. Gill, K. E. Nelson, T. D. Read, H. Tettelin, D. Richardson, M. D. Ermolaeva, J. Vamathevan, S. Bass, H. Qin, I. Dragoi, P. Sellers, L. McDonald, T. Utterback, R. D. Fleishmann, W. C. Nierman, O. White, S. L. Salzberg, H. O. Smith, R. R. Colwell, J. J. Mekalanos, J. C. Venter, and C. M. Fraser. 2000. DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae. Nature 406:477-483.
18. Helbling, E. W., E. S. Barbieri, M. A. Marcoval, R. J. Goncalves, and V. E. Villafane. 2005. Impact of solar ultraviolet radiation on marine phytoplankton of Patagonia, Argentina. Photochem. Photobiol. 81:807-818.
19. Henikoff, S., and J. G. Henikoff. 1992. Amino acid substitution matrices from protein blocks. Proc. Natl. Acad. Sci. USA 89:10915-10919.
20. Herrero, M., V. De Lorenzo, and K. N. Tinimis. 1990. Transposon vectors containing non-antibiotic resistance selection markers for cloning and stable chromosomal insertion of foreign genes in gram-negative bacteria. J. Bacteriol. 172:6557-6567.
21. Karl, D., and K. H. Nealson. 1980. Regulation of cellular metabolism during synthesis and expression of the luminous system in Beneckea and Photobacterium. J. Gen. Microbiol. 117:357-368.
22. Kelner, A. 1951. Action spectra for photoreactivation of ultraviolet-irradiated Escherichia coli and Streptomyces griseus. J. Gen. Physiol. 34:835-852.
23. Kozakiewicz, J., M. Gajewska, R. Lyzen, A. Czyz, and G. Wegrzyn. 2005. Bioluminescence-mediated stimulation of photoreactivation in bacteria. FEMS Microbiol. Lett. 250:105-110.
24. Lyzen, R., and G. Wegrzyn. 2005. Sensitivity of dark mutants of various strains of luminescent bacteria to reactive oxygen species. Arch. Microbiol. 183:203-208.
25. Makino, K., K. Oshima, K. Kurokawa, K. Yokoyama, T. Uda, K. Tagomori, Y. Iijima, M. Najima, M. Nakano, A. Yamashita, Y. Kubota, S. Kimura, T. Yasunaga, T. Honda, H. Shinagawa, M. Hattori, and T. Iida. 2003. Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V cholerae. Lancet 361:743-749.
26. McCann, J., E. V. Stabb, D. S. Millikan, and E. G. Ruby. 2003. Population dynamics of Vibrio fischeri during infection of Euprymna scolopes. Appl. Environ. Microbiol. 69:5928-5934.
27. Meighen, E. A. 1994. Genetics of bacterial bioluminescence. Annu. Rev. Genet. 28:117-139.
28. Miller, J. H. 1992. A short course in bacterial genetics. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
29. Nealson, K. H., and J. W. Hastings. 1979. Bacterial bioluminescence: its control and ecological significance. Microbiol. Rev. 43:496-518.
30. Okaichi, K., T. Ohnishi, and K. Nozu. 1984. Photoreactivation of UV-killing in Vibrio parahaemolyticus WP28. Photochem. Photobiol. 39:771-773.
31. Ozer, Z., J. T. Reardon, D. S. Hsu, K. Malhotra, and A. Sancar. 1995. The other function of DNA photolyase: stimulation of excision repair of chemical damage to DNA. Biochemistry 34:15886-15889.
32. Ruby, E. G., and L. M. Asato. 1993. Growth and flagellation of Vibrio fischeri during initiation of the sepiolid squid light organ symbiosis. Arch. Microbiol. 159:160-167.
33. Ruby, E. G., and K. Nealson. 1977. A luminous bacterium that emits yellow light. Science 196:432-434.
34. Ruby, E. G., M. Urbanowski, J. Campbell, A. Dunn, M. Faini, R. Gunsalus, P. Lohstroh, C. Lupp, J. McCann, D. Millikan, A. Schaefer, E. Stabb, A. Stevens, K. Visick, C. Whistler, and E. P. Greenberg. 2005. Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with pathogenic congeners. Proc. Natl. Acad. Sci. USA 102:3004-3009.
35. Stabb, E. V. 2005. Shedding light on the bioluminescence "paradox." ASM News 71:223-229.
36. Stabb, E. V., and E. G. Ruby. 2003. Contribution of pilA to competitive colonization of Euprymna scolopes by Vibrio fischeri. Appl. Environ. Microbiol. 69:820-826.
37. Stabb, E. V., and E. G. Ruby. 2002. RP4-based plasmids for conjugation between Escherichia coli and members of the Vibrionaceae. Methods Enzymol. 358:413-426.
38. Timmins, G. S., S. K. Jackson, and H. M. Swartz. 2001. The evolution of bioluminescent oxygen consumption as an ancient oxygen detoxification mechanism. J. Mol. Evol. 52:321-332.
39. Tu, S.-C., and H. I. X. Mager. 1995. Biochemistry of bacterial bioluminescence. Photochem. Photobiol. 62:615-624.
40. Vezzi, A., S. Campanaro, M. D'Angelo, F. Simonato, N. Vitulo, F. M. Lauro, A. Cestaro, G. Malacrida, B. Simionati, N. Cannata, C. Romualdi, D. H. Bartlett, and G. Valle. 2005. Life at depth: Photobacterium profundum genome sequence and expression analysis. Science 307:1459-1461.
41. Visick, K. L., J. Foster, J. Doino, M. McFall-Ngai, and E. G. Ruby. 2000. Vibrio fischeri lux genes play an important role in colonization and development of the host light organ. J. Bacteriol. 182:4578-4586.
42. Weber, S. 2005. Light-driven enzymatic catalysis of DNA repair: a review of recent biophysical studies on photolyase. Biochim. Biophys. Acta 1707:1-23.
43. Wegrzyn, G., and A. Czyz. 2002. How do marine bacteria produce light, why they are luminescent, and can we employ bacterial bioluminescence in aquatic biotechnology. Oceanologia 44:291-305.