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Volumn 21, Issue 7, 2006, Pages 511-519

Genomic analysis of influenza A viruses, including avian flu (H5N1) strains

Author keywords

Avian flu; Correspondence analysis; Genomic analysis; Influenza A virus; Synonymous codon usage

Indexed keywords

HEMAGGLUTININ; SIALIDASE;

EID: 33750057716     PISSN: 03932990     EISSN: 15737284     Source Type: Journal    
DOI: 10.1007/s10654-006-9031-z     Document Type: Article
Times cited : (35)

References (27)
  • 1
    • 13644270916 scopus 로고    scopus 로고
    • Molecular characterization of the complete genome of human influenza H5N1 virus isolates from Thailand
    • Puthavathana P, Auewarakul P, Charoenying PC, et al. Molecular characterization of the complete genome of human influenza H5N1 virus isolates from Thailand. J General Virol 2005; 86: 423-433.
    • (2005) J General Virol , vol.86 , pp. 423-433
    • Puthavathana, P.1    Auewarakul, P.2    Charoenying, P.C.3
  • 2
    • 0033807654 scopus 로고    scopus 로고
    • Molecular aspects of avian influenza (H5N1) viruses isolated from humans
    • Subbarao K, Shaw MW. Molecular aspects of avian influenza (H5N1) viruses isolated from humans. Rev Med Virol 2000; 10: 337-348.
    • (2000) Rev Med Virol , vol.10 , pp. 337-348
    • Subbarao, K.1    Shaw, M.W.2
  • 4
    • 33644850778 scopus 로고    scopus 로고
    • H5N1 moves into Africa, European Union, deepening global crisis
    • Enserink M. H5N1 moves into Africa, European Union, deepening global crisis. Science 2006; 311: 932.
    • (2006) Science , vol.311 , pp. 932
    • Enserink, M.1
  • 5
    • 12944270582 scopus 로고    scopus 로고
    • Avian-to-human transmission of H9N2 subtype influenza A viruses: Relationship between H9N2 and H5N1 human isolates
    • Lin YP, Shaw M, Gregory V, et al. Avian-to-human transmission of H9N2 subtype influenza A viruses: Relationship between H9N2 and H5N1 human isolates. Proc Natl Acad Sci 2000; 97: 9654-9658.
    • (2000) Proc Natl Acad Sci , vol.97 , pp. 9654-9658
    • Lin, Y.P.1    Shaw, M.2    Gregory, V.3
  • 7
    • 33645302150 scopus 로고    scopus 로고
    • Avian influenza - A pandemic waiting to happen?
    • Liu JP. Avian influenza - a pandemic waiting to happen?. J Microbiol Immunol Infect 2006; 39: 4-10.
    • (2006) J Microbiol Immunol Infect , vol.39 , pp. 4-10
    • Liu, J.P.1
  • 8
    • 0041736952 scopus 로고    scopus 로고
    • McGraw-Hill Companies, Inc. 1221 Avenue of the Americas, New York, USA, 338-341
    • Voyles BJ 2002, The Biology of Viruses. 2nd edn. McGraw-Hill Companies, Inc. 1221 Avenue of the Americas, New York, USA, pp. 147-149, 338-341.
    • (2002) The Biology of Viruses. 2nd Edn. , pp. 147-149
    • Voyles, B.J.1
  • 9
    • 0032927194 scopus 로고    scopus 로고
    • The surface glycoproteins of H5 influenza viruses isolated humans, chickens, and wild aquatic birds have distinguishable properties
    • Matrosovich M, Zhou N, Kawaoka Y, Webster R. The surface glycoproteins of H5 influenza viruses isolated humans, chickens, and wild aquatic birds have distinguishable properties. J Virol 1999; 73: 1146-1155.
    • (1999) J Virol , vol.73 , pp. 1146-1155
    • Matrosovich, M.1    Zhou, N.2    Kawaoka, Y.3    Webster, R.4
  • 10
    • 0038133117 scopus 로고    scopus 로고
    • Codon bias and frequency-dependent selection on the hemagglutinin epitopes of influenza A virus
    • Plotkin JB, Dushoff J. Codon bias and frequency-dependent selection on the hemagglutinin epitopes of influenza A virus. Proc Natl Acad Sci 2003; 100: 7152-7157.
    • (2003) Proc Natl Acad Sci , vol.100 , pp. 7152-7157
    • Plotkin, J.B.1    Dushoff, J.2
  • 11
    • 0020520729 scopus 로고
    • Receptor determinants of human and animal influenza virus isolates: Differences in receptor specificity of the H3 hemagglutinin based on species of origin
    • Rogers GN, Paulson JC. Receptor determinants of human and animal influenza virus isolates: differences in receptor specificity of the H3 hemagglutinin based on species of origin. Virology 1983; 127: 361-373.
    • (1983) Virology , vol.127 , pp. 361-373
    • Rogers, G.N.1    Paulson, J.C.2
  • 12
    • 0036889468 scopus 로고    scopus 로고
    • Evolution of synonymous codon usage in metazoans
    • Duret L. Evolution of synonymous codon usage in metazoans. Curr Opin Gene Dev 2002; 12: 640-649.
    • (2002) Curr Opin Gene Dev , vol.12 , pp. 640-649
    • Duret, L.1
  • 13
    • 0032169578 scopus 로고    scopus 로고
    • Codon. Replicational and transcriptional selection on codon usage in Borrelia burgdorferi
    • Mclnerney JO. Codon. Replicational and transcriptional selection on codon usage in Borrelia burgdorferi. Proc Natl Acad Sci 1998; 95: 10698-10703.
    • (1998) Proc Natl Acad Sci , vol.95 , pp. 10698-10703
    • Mclnerney, J.O.1
  • 14
    • 0027153966 scopus 로고
    • Codon usage bias and base composition of nuclear genes in Drosophila
    • Moriyama EN, Hartl DL. Codon usage bias and base composition of nuclear genes in Drosophila. Genetics. 1993; 134: 847-858.
    • (1993) Genetics , vol.134 , pp. 847-858
    • Moriyama, E.N.1    Hartl, D.L.2
  • 15
    • 0036796799 scopus 로고    scopus 로고
    • Synonymous codon usage in subject to selection in thermophilic bacteria
    • Lynn DJ, Singer GAC, Hickey DA. Synonymous codon usage in subject to selection in thermophilic bacteria. Nucleic Acids Res 2002; 30: 4272-4277.
    • (2002) Nucleic Acids Res , vol.30 , pp. 4272-4277
    • Lynn, D.J.1    Singer, G.A.C.2    Hickey, D.A.3
  • 16
    • 0023652058 scopus 로고
    • Synonymous codon usage in Bacillus stbtilis reflects both translational selection and mutational biases
    • Shields DC, Sharp PM. Synonymous codon usage in Bacillus stbtilis reflects both translational selection and mutational biases. Nucleic Acids Res 1987; 15: 8023-8040.
    • (1987) Nucleic Acids Res , vol.15 , pp. 8023-8040
    • Shields, D.C.1    Sharp, P.M.2
  • 17
    • 0028359705 scopus 로고
    • Codon usage in Caenorhabditis elegans: Delineation of translational selection and mutational biases
    • Stenico M, Lloyd AT, Sharp PM. Codon usage in Caenorhabditis elegans: delineation of translational selection and mutational biases. Nucleic Acids Res 1994; 22: 2437-2446.
    • (1994) Nucleic Acids Res , vol.22 , pp. 2437-2446
    • Stenico, M.1    Lloyd, A.T.2    Sharp, P.M.3
  • 18
    • 1642412614 scopus 로고    scopus 로고
    • Analysis of synonymous codon usage in SARS Coronavirus and other viruses in the Nidovirales
    • Gu W, Zhou T, Ma J, Sun X, Lu Z. Analysis of synonymous codon usage in SARS Coronavirus and other viruses in the Nidovirales. Virus Res 2004; 101: 155-161.
    • (2004) Virus Res , vol.101 , pp. 155-161
    • Gu, W.1    Zhou, T.2    Ma, J.3    Sun, X.4    Lu, Z.5
  • 19
    • 0037372775 scopus 로고    scopus 로고
    • The extent of codon usage bias in human RNA viruses and its evolutionary origin
    • Jenkins GM, Holmes EC. The extent of codon usage bias in human RNA viruses and its evolutionary origin. Virus Res 2003; 92: 1-7.
    • (2003) Virus Res , vol.92 , pp. 1-7
    • Jenkins, G.M.1    Holmes, E.C.2
  • 20
    • 0023046211 scopus 로고
    • Codon usage in regulatory genes in Escherichia coli does not reflect for 'rare' codons
    • Sharp PM, Li WH. Codon usage in regulatory genes in Escherichia coli does not reflect for 'rare' codons. Nucleic Acids Res 1986; 14: 7737-7749.
    • (1986) Nucleic Acids Res , vol.14 , pp. 7737-7749
    • Sharp, P.M.1    Li, W.H.2
  • 21
    • 0025318864 scopus 로고
    • The 'effective number of codons' used in a gene
    • Wright F. The 'effective number of codons' used in a gene. Gene 1990; 87: 23-29.
    • (1990) Gene , vol.87 , pp. 23-29
    • Wright, F.1
  • 24
    • 0037109119 scopus 로고    scopus 로고
    • Use and misuse of correspondence analysis in codon usage studies
    • Perrière G, Thioulouse J. Use and misuse of correspondence analysis in codon usage studies. Nucleic Acids Res 2002; 30: 4548-4555.
    • (2002) Nucleic Acids Res , vol.30 , pp. 4548-4555
    • Perrière, G.1    Thioulouse, J.2
  • 25
    • 33644666095 scopus 로고    scopus 로고
    • Avian flu (H5N1): Its epidemiology, prevention, and implications for anaesthesiology
    • Edler AA. Avian flu (H5N1): its epidemiology, prevention, and implications for anaesthesiology. J Clin Anesth 2006; 18: 1-4.
    • (2006) J Clin Anesth , vol.18 , pp. 1-4
    • Edler, A.A.1
  • 26
    • 0034993662 scopus 로고    scopus 로고
    • Infection of a child in Hong Kong by influenza A h3n2 virus closely related to viruses circulating in European pigs
    • Gregory V, Lim W, Cameron K, et al. Infection of a child in Hong Kong by influenza A h3n2 virus closely related to viruses circulating in European pigs. J Gen Virol 2001; 82: 1397-1406.
    • (2001) J Gen Virol , vol.82 , pp. 1397-1406
    • Gregory, V.1    Lim, W.2    Cameron, K.3
  • 27
    • 2942514682 scopus 로고    scopus 로고
    • Interactions of influenza A virus with sialic acids present on porcine surfactant protein D
    • Eijk M, White MR, Batenburg JJ, et al. Interactions of influenza A virus with sialic acids present on porcine surfactant protein D. Am J Respir Cell Mol Biol 2004; 30: 871-879.
    • (2004) Am J Respir Cell Mol Biol , vol.30 , pp. 871-879
    • Eijk, M.1    White, M.R.2    Batenburg, J.J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.