메뉴 건너뛰기




Volumn 152, Issue 10, 2006, Pages 2985-2992

Stimulation of the λ pR promoter by Escherichia coli SeqA protein requires downstream GATC sequences and involves late stages of transcription initiation

Author keywords

[No Author keywords available]

Indexed keywords

ADENINE; BACTERIAL PROTEIN; CELL DNA; CYTOSINE; GUANINE; PROTEIN SEQA; THYMIDINE; TRANSCRIPTION ELONGATION FACTOR; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR CLL; UNCLASSIFIED DRUG; BETA GALACTOSIDASE; DNA BINDING PROTEIN; ESCHERICHIA COLI PROTEIN; OUTER MEMBRANE PROTEIN; SEQA PROTEIN, E COLI; VIRUS DNA;

EID: 33749643554     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/mic.0.29110-0     Document Type: Article
Times cited : (7)

References (39)
  • 1
    • 20444426522 scopus 로고    scopus 로고
    • An oriC-like distribution of GATC sites mediates full sequestration of non-origin sequences in Escherichia coli
    • Bach, T. & Skarstad, K. (2005). An oriC-like distribution of GATC sites mediates full sequestration of non-origin sequences in Escherichia coli. J Mol Biol 350, 7-11.
    • (2005) J Mol Biol , vol.350 , pp. 7-11
    • Bach, T.1    Skarstad, K.2
  • 2
    • 0037439256 scopus 로고    scopus 로고
    • Excess SeqA prolongs sequestration of oriC and delays nucleoid segregation and cell division
    • Bach, T., Krekling, M. A. & Skarstad, K (2003). Excess SeqA prolongs sequestration of oriC and delays nucleoid segregation and cell division. EMBO J 22, 315-323.
    • (2003) EMBO J , vol.22 , pp. 315-323
    • Bach, T.1    Krekling, M.A.2    Skarstad, K.3
  • 3
    • 0029998531 scopus 로고    scopus 로고
    • Coordinating DNA replication initiation with cell growth: Differential roles for DnaA and SeqA proteins
    • Boye, E., Stokke, T., Kleckner, N. & Skarstad, K (1996). Coordinating DNA replication initiation with cell growth: differential roles for DnaA and SeqA proteins. Proc Natl Acad Sci U S A 93, 12206-12211.
    • (1996) Proc Natl Acad Sci U S A , vol.93 , pp. 12206-12211
    • Boye, E.1    Stokke, T.2    Kleckner, N.3    Skarstad, K.4
  • 4
    • 0027980255 scopus 로고
    • Anaerobic regulation of the hydrogenase 1 (hya) operon of Escherichia coli
    • Brondsted, L. & Atlung, T. (1994). Anaerobic regulation of the hydrogenase 1 (hya) operon of Escherichia coli. J Bacteriol 176, 5423-5428.
    • (1994) J Bacteriol , vol.176 , pp. 5423-5428
    • Brondsted, L.1    Atlung, T.2
  • 5
    • 0021357731 scopus 로고
    • Defining a bacteriophage T4 late promoter: Absence of a -35 region
    • Elliot, T. & Geiduschek, E. P. (1984). Defining a bacteriophage T4 late promoter: absence of a -35 region. Cell 36, 211-219.
    • (1984) Cell , vol.36 , pp. 211-219
    • Elliot, T.1    Geiduschek, E.P.2
  • 8
    • 0031991771 scopus 로고    scopus 로고
    • Cell cycle-dependent duplication and bidirectional migration of SeqA associated DNA-protein complexes in E. coli
    • Hiraga, S., Ichinose, C., Niki, H. & Yamazoe, M. (1998). Cell cycle-dependent duplication and bidirectional migration of SeqA associated DNA-protein complexes in E. coli. Mol Cell 1, 381-387.
    • (1998) Mol Cell , vol.1 , pp. 381-387
    • Hiraga, S.1    Ichinose, C.2    Niki, H.3    Yamazoe, M.4
  • 9
    • 4744340583 scopus 로고    scopus 로고
    • Positive supercoiling is generated in the presence of Escherichia coli SeqA protein
    • Klungsoyr, H. K. & Skarstad, K. (2004). Positive supercoiling is generated in the presence of Escherichia coli SeqA protein. Mol Microbiol 54, 123-131.
    • (2004) Mol Microbiol , vol.54 , pp. 123-131
    • Klungsoyr, H.K.1    Skarstad, K.2
  • 10
    • 0029986504 scopus 로고    scopus 로고
    • A branched pathway in the early stage of transcription by Escherichia coli RNA polymerase
    • Kubori, T. & Shimamoto, N. (1996). A branched pathway in the early stage of transcription by Escherichia coli RNA polymerase. J Mol Biol 256, 449-457.
    • (1996) J Mol Biol , vol.256 , pp. 449-457
    • Kubori, T.1    Shimamoto, N.2
  • 11
    • 0037446886 scopus 로고    scopus 로고
    • Role of SeqA and Dam in Escherichia coli gene expression: A global /microarray analysis
    • Lobner-Olsen, A., Marinus, M. G. & Hansen, F. G. (2003). Role of SeqA and Dam in Escherichia coli gene expression: a global/microarray analysis. Proc Natl Acad Sci U S A 100, 4672-4677.
    • (2003) Proc Natl Acad Sci U S A , vol.100 , pp. 4672-4677
    • Lobner-Olsen, A.1    Marinus, M.G.2    Hansen, F.G.3
  • 12
    • 0028219947 scopus 로고
    • SeqA: A negative modulator of replication initiation in E. coli
    • Lu, M., Campbell, J. L., Boye, E. & Kleckner, N. (1994). SeqA: a negative modulator of replication initiation in E. coli. Cell 77, 413-426.
    • (1994) Cell , vol.77 , pp. 413-426
    • Lu, M.1    Campbell, J.L.2    Boye, E.3    Kleckner, N.4
  • 13
    • 0035067086 scopus 로고    scopus 로고
    • The AraC transcriptional activators
    • Martin, R. G. & Rosner, J. L. (2001). The AraC transcriptional activators. Curr Opin Microbiol 4, 132-137.
    • (2001) Curr Opin Microbiol , vol.4 , pp. 132-137
    • Martin, R.G.1    Rosner, J.L.2
  • 14
    • 0034595499 scopus 로고    scopus 로고
    • R promoter of bacteriophage lambda affect steps in open complex formation that precede DNA strand separation
    • R promoter of bacteriophage lambda affect steps in open complex formation that precede DNA strand separation. J Mol Biol 299, 337-349.
    • (2000) J Mol Biol , vol.299 , pp. 337-349
    • McKane, M.1    Gussin, G.N.2
  • 15
    • 0003785155 scopus 로고
    • Experiments in Molecular Genetics
    • Cold Spring Harbor, NY: Cold Spring Harbor Laboratory
    • Miller, J. H. (1972). Experiments in Molecular Genetics. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
    • (1972)
    • Miller, J.H.1
  • 16
    • 3042513379 scopus 로고    scopus 로고
    • Replication fork and SeqA focus distribution in Escherichia coli suggest a replication hyperstructure dependent on nucleotide metabolism
    • Molina, F. & Skarstad, K. (2004). Replication fork and SeqA focus distribution in Escherichia coli suggest a replication hyperstructure dependent on nucleotide metabolism. Mol Microbiol 52, 1597-1612.
    • (2004) Mol Microbiol , vol.52 , pp. 1597-1612
    • Molina, F.1    Skarstad, K.2
  • 17
    • 0035159950 scopus 로고    scopus 로고
    • Novel group of virulence activators within the AraC family that are not restricted to upstream binding sites
    • Munson, G., Holcomb, L. G. & Scott, J. R. (2001). Novel group of virulence activators within the AraC family that are not restricted to upstream binding sites. Infect Immun 69, 186-193.
    • (2001) Infect Immun , vol.69 , pp. 186-193
    • Munson, G.1    Holcomb, L.G.2    Scott, J.R.3
  • 18
    • 0012690768 scopus 로고    scopus 로고
    • Transcription factor as a topological homeostat
    • Muskhelishvili, G. & Travers, A. (2003). Transcription factor as a topological homeostat. Front Biosci 8, 279-285.
    • (2003) Front Biosci , vol.8 , pp. 279-285
    • Muskhelishvili, G.1    Travers, A.2
  • 19
    • 0035997035 scopus 로고    scopus 로고
    • Hypothesis: Hyperstructures regulate initiation in Escherichia coli and other bacteria
    • Norris, V., Demarty, M., Raine, D., Cabin-Flaman, A. & Le Sceller, L. (2002). Hypothesis: hyperstructures regulate initiation in Escherichia coli and other bacteria. Biochimie 84, 341-347.
    • (2002) Biochimie , vol.84 , pp. 341-347
    • Norris, V.1    Demarty, M.2    Raine, D.3    Cabin-Flaman, A.4    Le Sceller, L.5
  • 20
    • 27644508886 scopus 로고    scopus 로고
    • Specific N-terminal interactions of the Escherichia coli SeqA protein are required to form multimers that restrain negative supercoils and form foci
    • Odsbu, I., Klungsoyr, H. K., Fossum, S. & Skarstad, K (2005). Specific N-terminal interactions of the Escherichia coli SeqA protein are required to form multimers that restrain negative supercoils and form foci. Genes Cells 10, 1039-1049.
    • (2005) Genes Cells , vol.10 , pp. 1039-1049
    • Odsbu, I.1    Klungsoyr, H.K.2    Fossum, S.3    Skarstad, K.4
  • 22
    • 0032516863 scopus 로고    scopus 로고
    • Activation of gene expression by a novel DNA structural transmission mechanism that requires supercoiling-induced DNA duplex destabilization in an upstream activating sequence
    • Sheridan, S. D., Benham, C. J. & Hatfield, G. W. (1998). Activation of gene expression by a novel DNA structural transmission mechanism that requires supercoiling-induced DNA duplex destabilization in an upstream activating sequence. J Biol Chem 273, 21298-21308.
    • (1998) J Biol Chem , vol.273 , pp. 21298-21308
    • Sheridan, S.D.1    Benham, C.J.2    Hatfield, G.W.3
  • 23
    • 0033935409 scopus 로고    scopus 로고
    • The Escherichia coli SeqA protein binds specifically and cooperatively to two sites in hemimethylated and fully methylated oriC
    • Skarstad, K., Lueder, G., Lurz, R., Speck, C. & Messer, W. (2000). The Escherichia coli SeqA protein binds specifically and cooperatively to two sites in hemimethylated and fully methylated oriC. Mol Microbiol 36, 1319-1326.
    • (2000) Mol Microbiol , vol.36 , pp. 1319-1326
    • Skarstad, K.1    Lueder, G.2    Lurz, R.3    Speck, C.4    Messer, W.5
  • 24
    • 0029147297 scopus 로고
    • E. coli SeqA protein binds oriC in two different methyl-modulated reactions appropriate to its roles in DNA replication initiation and origin sequestration
    • Slater, S., Wold, S., Lu, M., Boye, E., Skarstad, K. & Kleckner, N. (1995). E. coli SeqA protein binds oriC in two different methyl-modulated reactions appropriate to its roles in DNA replication initiation and origin sequestration. Cell 82, 927-936.
    • (1995) Cell , vol.82 , pp. 927-936
    • Slater, S.1    Wold, S.2    Lu, M.3    Boye, E.4    Skarstad, K.5    Kleckner, N.6
  • 25
    • 0034944739 scopus 로고    scopus 로고
    • SeqA, the Escherichia coli origin sequestration protein, is also a specific transcription factor
    • Słomińska, M., Wȩgrzyn, A., Konopa, G., Skarstad, K. & Wȩgrzyn, G. (2001). SeqA, the Escherichia coli origin sequestration protein, is also a specific transcription factor. Mol Microbiol 40, 1371-1380.
    • (2001) Mol Microbiol , vol.40 , pp. 1371-1380
    • Słomińska, M.1    Wȩgrzyn, A.2    Konopa, G.3    Skarstad, K.4    Wȩgrzyn, G.5
  • 27
    • 0344405709 scopus 로고    scopus 로고
    • SeqA-mediated stimulation of a promoter activity by facilitating functions of a transcription activator
    • Słomińska, M., Konopa, G., Ostrowska, J., Kȩdzierska, B., Wȩpgrzyn, G. & Wȩpgrzyn, A. (2003b). SeqA-mediated stimulation of a promoter activity by facilitating functions of a transcription activator. Mol Microbiol 47, 1669-1679.
    • (2003) Mol Microbiol , vol.47 , pp. 1669-1679
    • Słomińska, M.1    Konopa, G.2    Ostrowska, J.3    Kȩdzierska, B.4    Wȩpgrzyn, G.5    Wȩpgrzyn, A.6
  • 28
    • 0037444794 scopus 로고    scopus 로고
    • The degradation of mutant initiator protein DnaA204 by proteases ClpP, ClpQ and Lon is prevented when DNA is SeqA-free
    • Słomińska, M., Wahl, A., Wȩgrzyn, G. & Skarstad, K. (2003c). The degradation of mutant initiator protein DnaA204 by proteases ClpP, ClpQ and Lon is prevented when DNA is SeqA-free. Biochem J 370, 867-871.
    • (2003) Biochem J , vol.370 , pp. 867-871
    • Słomińska, M.1    Wahl, A.2    Wȩgrzyn, G.3    Skarstad, K.4
  • 30
    • 2342486532 scopus 로고    scopus 로고
    • Non-random distribution of GATC sequences in regions of promoters stimulated by the SeqA protein of Escherichia coli
    • Strzelczyk B., Słomińska-Wojewódzka, M., Wȩgrzyn, G. & Wȩgrzyn, A. (2003). Non-random distribution of GATC sequences in regions of promoters stimulated by the SeqA protein of Escherichia coli. Acta Biochim Pol 50, 941-945.
    • (2003) Acta Biochim Pol , vol.50 , pp. 941-945
    • Strzelczyk, B.1    Słomińska-Wojewódzka, M.2    Wȩgrzyn, G.3    Wȩgrzyn, A.4
  • 31
    • 0032516065 scopus 로고    scopus 로고
    • DnaA-stimulated transcriptional activation of oriλ: Escherichia coli RNA polymerase β subunit as a transcriptional activator contact site
    • Szalewska-Pałasz, A., Wȩgrzyn, A., Błaszczak A., Taylor, K & Wȩgrzyn, G. (1998). DnaA-stimulated transcriptional activation of oriλ: Escherichia coli RNA polymerase β subunit as a transcriptional activator contact site. Proc Natl Acad Sci U S A 95, 4241-4246.
    • (1998) Proc Natl Acad Sci U S A , vol.95 , pp. 4241-4246
    • Szalewska-Pałasz, A.1    Wȩgrzyn, A.2    Błaszczak, A.3    Taylor, K.4    Wȩgrzyn, G.5
  • 32
    • 0026045416 scopus 로고
    • Escherichia coli rpoA mutation which impairs transcription from positively regulated systems
    • Thomas, M. S. & Glass, R. E. (1991). Escherichia coli rpoA mutation which impairs transcription from positively regulated systems. Mol Microbiol 5, 2719-2725.
    • (1991) Mol Microbiol , vol.5 , pp. 2719-2725
    • Thomas, M.S.1    Glass, R.E.2
  • 33
  • 34
    • 0028148879 scopus 로고
    • SeqA limits DnaA activity in replication from oriC in Escherichia coli
    • von Freiesleben, U., Rasmussen, K V. & Schaechter, M. (1994). SeqA limits DnaA activity in replication from oriC in Escherichia coli. Mol Microbiol 14, 763-772.
    • (1994) Mol Microbiol , vol.14 , pp. 763-772
    • von Freiesleben, U.1    Rasmussen, K.V.2    Schaechter, M.3
  • 35
    • 33749621002 scopus 로고    scopus 로고
    • DnaA and SeqA proteins of Escherichia coli as regulators of bacteriophage λ development
    • In Edited by G. Wȩgrzyn. Trivandrum, Kerala: Research Signpost
    • Wȩgrzyn, A. (2006). DnaA and SeqA proteins of Escherichia coli as regulators of bacteriophage λ development. In Modern Bacteriophage Biology and Biotechnology, pp. 79-101. Edited by G. Wȩgrzyn. Trivandrum, Kerala: Research Signpost.
    • (2006) Modern Bacteriophage Biology and Biotechnology , pp. 79-101
    • Wȩgrzyn, A.1
  • 36
    • 0029907413 scopus 로고    scopus 로고
    • Allele specificity of the Escherichia coli dnaA gene function in the replication of plasmids derived from phage λ
    • Wȩgrzyn, G., Wȩgrzyn, A., Pankiewicz, A. & Taylor, K. (1996). Allele specificity of the Escherichia coli dnaA gene function in the replication of plasmids derived from phage λ. Mol Gen Genet 252, 580-586.
    • (1996) Mol Gen Genet , vol.252 , pp. 580-586
    • Wȩgrzyn, G.1    Wȩgrzyn, A.2    Pankiewicz, A.3    Taylor, K.4
  • 37
    • 0033022723 scopus 로고    scopus 로고
    • Altered biological properties of cell membranes in Escherichia coli dnaA and seqA mutants
    • Wȩgrzyn, A., Wróbel, B. & Wȩgrzyn, G. (1999). Altered biological properties of cell membranes in Escherichia coli dnaA and seqA mutants. Mol Gen Genet 261, 762-769.
    • (1999) Mol Gen Genet , vol.261 , pp. 762-769
    • Wȩgrzyn, A.1    Wróbel, B.2    Wȩgrzyn, G.3
  • 38
    • 0032879895 scopus 로고    scopus 로고
    • Mutual suppression of mukB and seqA phenotypes might arise from their opposing influences on the Escherichia coli nucleoid structure
    • Weitao, T., Nordstrom, K. & Dasgupta, S. (1999). Mutual suppression of mukB and seqA phenotypes might arise from their opposing influences on the Escherichia coli nucleoid structure. Mol Microbiol 34, 157-168.
    • (1999) Mol Microbiol , vol.34 , pp. 157-168
    • Weitao, T.1    Nordstrom, K.2    Dasgupta, S.3
  • 39
    • 0032528270 scopus 로고    scopus 로고
    • Effects of purified SeqA protein on oriC-dependent DNA replication in vitro
    • Wold, S., Boye, E., Slater, S., Kleckner, N. & Skarstad, K. (1998). Effects of purified SeqA protein on oriC-dependent DNA replication in vitro. EMBO J 17, 4158-4165.
    • (1998) EMBO J , vol.17 , pp. 4158-4165
    • Wold, S.1    Boye, E.2    Slater, S.3    Kleckner, N.4    Skarstad, K.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.