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Volumn 23, Issue 11, 2006, Pages 2001-2007

Conservation of distantly related membrane proteins: Photosynthetic reaction centers share a common structural core

Author keywords

Evolution; Photosynthesis; Protein structure; Reaction center

Indexed keywords

BACTERIORHODOPSIN; CYTOCHROME B; CYTOCHROME C OXIDASE; HOMODIMER; MEMBRANE PROTEIN; OXYGEN; PIGMENT;

EID: 33749550607     PISSN: 07374038     EISSN: 15371719     Source Type: Journal    
DOI: 10.1093/molbev/msl079     Document Type: Article
Times cited : (95)

References (40)
  • 1
    • 0035910063 scopus 로고    scopus 로고
    • Combining multiple structure and sequence alignments to improve sequence detection and alignment: Application to the SH2 domains of Janus kinases
    • Al-Lazikani B, Sheinerman FB, Honig B. 2001. Combining multiple structure and sequence alignments to improve sequence detection and alignment: application to the SH2 domains of Janus kinases. Proc Natl Acad Sci USA 98:14796-801.
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 14796-14801
    • Al-Lazikani, B.1    Sheinerman, F.B.2    Honig, B.3
  • 2
    • 13844284334 scopus 로고    scopus 로고
    • A redox switch hypothesis for the origin of two light reactions in photosynthesis
    • Allen JF. 2005. A redox switch hypothesis for the origin of two light reactions in photosynthesis. FEBS Lett 579:963-8.
    • (2005) FEBS Lett , vol.579 , pp. 963-968
    • Allen, J.F.1
  • 3
    • 10644230266 scopus 로고    scopus 로고
    • A genomic timescale of prokaryote evolution: Insights into the origin of methanogenesis, phototrophy, and the colonization of land
    • Battistuzzi FU, Feijao A, Hedges SB. 2004. A genomic timescale of prokaryote evolution: insights into the origin of methanogenesis, phototrophy, and the colonization of land. BMC Evol Biol 4:44.
    • (2004) BMC Evol Biol , vol.4 , pp. 44
    • Battistuzzi, F.U.1    Feijao, A.2    Hedges, S.B.3
  • 6
    • 0027105895 scopus 로고
    • Origin and early evolution of photosynthesis
    • Blankenship RE. 1992. Origin and early evolution of photosynthesis. Photosynth Res 33:91-111.
    • (1992) Photosynth Res , vol.33 , pp. 91-111
    • Blankenship, R.E.1
  • 7
    • 0028024674 scopus 로고
    • Protein structure, electron transfer and evolution of prokaryotic photosynthetic reaction centers
    • Blankenship RE. 1994. Protein structure, electron transfer and evolution of prokaryotic photosynthetic reaction centers. Antonie Leeuwenhoek 65:311-29.
    • (1994) Antonie Leeuwenhoek , vol.65 , pp. 311-329
    • Blankenship, R.E.1
  • 9
    • 0032031956 scopus 로고    scopus 로고
    • The origin and evolution of oxygenic photosynthesis
    • Blankenship RE, Hartman H. 1998. The origin and evolution of oxygenic photosynthesis. Trends Biochem Sci 23:94-7.
    • (1998) Trends Biochem Sci , vol.23 , pp. 94-97
    • Blankenship, R.E.1    Hartman, H.2
  • 10
    • 0028172534 scopus 로고
    • The immunoglobulin fold. Structural classification, sequence patterns and common core
    • Bork P, Holm L, Sander C. 1994. The immunoglobulin fold. Structural classification, sequence patterns and common core. J Mol Biol 242:309-20.
    • (1994) J Mol Biol , vol.242 , pp. 309-320
    • Bork, P.1    Holm, L.2    Sander, C.3
  • 11
    • 0026732787 scopus 로고
    • Photosynthetic reaction center genes in green sulfur bacteria and in photosystem 1 are related
    • Buttner M, Xie DL, Nelson H, Pinther W, Hauska G, Nelson N. 1992. Photosynthetic reaction center genes in green sulfur bacteria and in photosystem 1 are related. Proc Natl Acad Sci USA 89:8135-9.
    • (1992) Proc Natl Acad Sci USA , vol.89 , pp. 8135-8139
    • Buttner, M.1    Xie, D.L.2    Nelson, H.3    Pinther, W.4    Hauska, G.5    Nelson, N.6
  • 12
    • 0022706389 scopus 로고
    • The relation between the divergence of sequence and structure in proteins
    • Chothia C, Lesk A. 1986. The relation between the divergence of sequence and structure in proteins. EMBO J 5:823-6.
    • (1986) EMBO J , vol.5 , pp. 823-826
    • Chothia, C.1    Lesk, A.2
  • 15
    • 0028023672 scopus 로고
    • Structure of photosystem-I. Suggestions on the docking sites for plastocyanin, ferredoxin and the coordination of P700
    • Fromme P, Schubert WD, Krauss N. 1994. Structure of photosystem-I. Suggestions on the docking sites for plastocyanin, ferredoxin and the coordination of P700. Biochim Biophys Acta 1187:99-105.
    • (1994) Biochim Biophys Acta , vol.1187 , pp. 99-105
    • Fromme, P.1    Schubert, W.D.2    Krauss, N.3
  • 17
    • 0027440362 scopus 로고
    • Protein-structure comparison by alignment of distance matrices
    • Holm L, Sander C. 1993. Protein-structure comparison by alignment of distance matrices. J Mol Biol 233:123-38.
    • (1993) J Mol Biol , vol.233 , pp. 123-138
    • Holm, L.1    Sander, C.2
  • 18
    • 0033551889 scopus 로고    scopus 로고
    • A new molecular window on early life
    • Knoll AH. 1999. A new molecular window on early life. Science 285:1025-6.
    • (1999) Science , vol.285 , pp. 1025-1026
    • Knoll, A.H.1
  • 19
    • 0027186183 scopus 로고
    • Single core polypeptide in the reaction center of the photosynthetic bacterium Heliobacillus mobilis: Structural implications and relations to other photosystems
    • Liebl U, Mockensturm-Wilson M, Trost JT, Brune DC, Blankenship RE, Vermaas W. 1993. Single core polypeptide in the reaction center of the photosynthetic bacterium Heliobacillus mobilis: structural implications and relations to other photosystems. Proc Natl Acad Sci USA 90:7124-8.
    • (1993) Proc Natl Acad Sci USA , vol.90 , pp. 7124-7128
    • Liebl, U.1    Mockensturm-Wilson, M.2    Trost, J.T.3    Brune, D.C.4    Blankenship, R.E.5    Vermaas, W.6
  • 20
    • 0029938408 scopus 로고    scopus 로고
    • Gene duplication and the evolution of photosynthetic reaction center proteins
    • Lockhart P, Steel M, Larkum A. 1996. Gene duplication and the evolution of photosynthetic reaction center proteins. FEBS Lett 385:193-96,
    • (1996) FEBS Lett , vol.385 , pp. 193-196
    • Lockhart, P.1    Steel, M.2    Larkum, A.3
  • 21
    • 0029763144 scopus 로고    scopus 로고
    • Gene duplication and the evolution of photosynthetic reaction center proteins
    • Lockhart P, Steel M, Larkum A. 1996. Gene duplication and the evolution of photosynthetic reaction center proteins. FEBS Lett 390:242.
    • (1996) FEBS Lett , vol.390 , pp. 242
    • Lockhart, P.1    Steel, M.2    Larkum, A.3
  • 22
    • 0043145962 scopus 로고
    • Relevance of the photosynthetic reaction center from purple bacteria to the structure of photosystem II
    • Michel H, Deisenhofer J. 1988. Relevance of the photosynthetic reaction center from purple bacteria to the structure of photosystem II. Biochemistry 27:1-7.
    • (1988) Biochemistry , vol.27 , pp. 1-7
    • Michel, H.1    Deisenhofer, J.2
  • 23
    • 16444376047 scopus 로고    scopus 로고
    • Phylogenetic analyses of the core antenna domain: Investigating the origin of photosystem I
    • Mix LJ, Haig D, Cavanaugh CM. 2005. Phylogenetic analyses of the core antenna domain: investigating the origin of photosystem I. J Mol Evol 60:153-63.
    • (2005) J Mol Evol , vol.60 , pp. 153-163
    • Mix, L.J.1    Haig, D.2    Cavanaugh, C.M.3
  • 24
    • 0031766401 scopus 로고    scopus 로고
    • HOMSTRAD: A database of protein structure alignments for homologous families
    • Mizuguchi K, Deane CM, Blundell TL, Overington JP. 1998. HOMSTRAD: a database of protein structure alignments for homologous families. Protein Sci 7:2469-71.
    • (1998) Protein Sci , vol.7 , pp. 2469-2471
    • Mizuguchi, K.1    Deane, C.M.2    Blundell, T.L.3    Overington, J.P.4
  • 25
    • 0028961335 scopus 로고
    • SCOP: A structural classification of proteins database for the investigation of sequences and structures
    • Murzin AG, Brenner SE, Hubbard T, Chothia C. 1995. SCOP: a structural classification of proteins database for the investigation of sequences and structures. J Mol Biol 247:536-40.
    • (1995) J Mol Biol , vol.247 , pp. 536-540
    • Murzin, A.G.1    Brenner, S.E.2    Hubbard, T.3    Chothia, C.4
  • 27
    • 1942440433 scopus 로고    scopus 로고
    • The evolutionary development of the protein complement of photosystem 2
    • Raymond J, Blankenship RE. 2004a. The evolutionary development of the protein complement of photosystem 2. Biochim Biophys Acta 1655:133-9.
    • (2004) Biochim Biophys Acta , vol.1655 , pp. 133-139
    • Raymond, J.1    Blankenship, R.E.2
  • 28
    • 23844554290 scopus 로고    scopus 로고
    • Biosynthetic pathways, gene replacement, and the antiquity of life
    • Raymond, J, Blankenship RE. 2004b. Biosynthetic pathways, gene replacement, and the antiquity of life. Geobiology 2:199-201.
    • (2004) Geobiology , vol.2 , pp. 199-201
    • Raymond, J.1    Blankenship, R.E.2
  • 29
    • 0032962457 scopus 로고    scopus 로고
    • Twilight zone of protein sequence alignments
    • Rost B. 1999. Twilight zone of protein sequence alignments. Protein Eng 12:85-94.
    • (1999) Protein Eng , vol.12 , pp. 85-94
    • Rost, B.1
  • 30
    • 0032504023 scopus 로고    scopus 로고
    • A common ancestor for oxygenic and anoxygenic photosynthetic systems: A comparison based on the structural model of photosystem I
    • Schubert WD, Klukas O, Saenger W, Witt HT, Fromme P, Krauss N. 1998. A common ancestor for oxygenic and anoxygenic photosynthetic systems: a comparison based on the structural model of photosystem I. J Mol Biol 280:297-314.
    • (1998) J Mol Biol , vol.280 , pp. 297-314
    • Schubert, W.D.1    Klukas, O.2    Saenger, W.3    Witt, H.T.4    Fromme, P.5    Krauss, N.6
  • 31
    • 0031715982 scopus 로고    scopus 로고
    • Protein structure alignment by incremental combinatorial extension CE of the optimal path
    • Shindyalov IN, Bourne PE. 1998. Protein structure alignment by incremental combinatorial extension CE of the optimal path. Protein Eng 11:739-47.
    • (1998) Protein Eng , vol.11 , pp. 739-747
    • Shindyalov, I.N.1    Bourne, P.E.2
  • 33
    • 0033527055 scopus 로고    scopus 로고
    • 2-Methylhopanoids as biomarkers for cyanobacterial oxygenic photosynthesis
    • Summons RE, Jahnke LL, Hope JM, Logan GA. 1999. 2-Methylhopanoids as biomarkers for cyanobacterial oxygenic photosynthesis. Nature 400:554-7.
    • (1999) Nature , vol.400 , pp. 554-557
    • Summons, R.E.1    Jahnke, L.L.2    Hope, J.M.3    Logan, G.A.4
  • 34
    • 31344436715 scopus 로고    scopus 로고
    • Hydrogen-based carbon fixation in the earliest known photosynthetic organisms
    • Tice M, Lowe D. 2006. Hydrogen-based carbon fixation in the earliest known photosynthetic organisms. Geology 34:37-40.
    • (2006) Geology , vol.34 , pp. 37-40
    • Tice, M.1    Lowe, D.2
  • 35
    • 0036301809 scopus 로고    scopus 로고
    • Ribonucleotide reductases: Divergent evolution of an ancient enzyme
    • Torrents E, Aloy P, Gibert I, Rodriguez-Trelles F. 2002. Ribonucleotide reductases: divergent evolution of an ancient enzyme. J Mol Evol 55:138-52.
    • (2002) J Mol Evol , vol.55 , pp. 138-152
    • Torrents, E.1    Aloy, P.2    Gibert, I.3    Rodriguez-Trelles, F.4
  • 36
    • 0026063120 scopus 로고
    • GTPase domains of ras p21 oncogene protein and elongation factor Tu: Analysis of three-dimensional structures, sequence families, and functional sites
    • Valencia A, Kjeldgaard M, Pai EF, Sander C. 1991. GTPase domains of ras p21 oncogene protein and elongation factor Tu: analysis of three-dimensional structures, sequence families, and functional sites. Proc Natl Acad Sci USA 88:5443-7.
    • (1991) Proc Natl Acad Sci USA , vol.88 , pp. 5443-5447
    • Valencia, A.1    Kjeldgaard, M.2    Pai, E.F.3    Sander, C.4
  • 37
    • 0001141583 scopus 로고
    • Primary structure of the L subunit of the reaction center from Rhodopseudomonas sphaeroides
    • Williams JC, Steiner LA, Feher G, Simon MI. 1984. Primary structure of the L subunit of the reaction center from Rhodopseudomonas sphaeroides. Proc Natl Acad Sci USA 81:7303-7.
    • (1984) Proc Natl Acad Sci USA , vol.81 , pp. 7303-7307
    • Williams, J.C.1    Steiner, L.A.2    Feher, G.3    Simon, M.I.4
  • 38
    • 0036414764 scopus 로고    scopus 로고
    • A cytochrome b origin of photosynthetic reaction centers: An evolutionary link between respiration and photosynthesis
    • Xiong J, Bauer CE. 2002. A cytochrome b origin of photosynthetic reaction centers: an evolutionary link between respiration and photosynthesis. J Mol Biol 322:1025-37.
    • (2002) J Mol Biol , vol.322 , pp. 1025-1037
    • Xiong, J.1    Bauer, C.E.2
  • 39
    • 0034622999 scopus 로고    scopus 로고
    • Molecular evidence for the early evolution of photosynthesis
    • Xiong J, Fischer W, Inoue K, Nakahara M, Bauer CE. 2000. Molecular evidence for the early evolution of photosynthesis. Science 289:1724-30.
    • (2000) Science , vol.289 , pp. 1724-1730
    • Xiong, J.1    Fischer, W.2    Inoue, K.3    Nakahara, M.4    Bauer, C.E.5
  • 40
    • 0021455018 scopus 로고
    • Nucleotide and deduced polypeptide sequences of the photosynthetic reaction-center, B870 antenna, and flanking polypeptides from R. capsulata
    • Youvan DC, Bylina EJ, Alberti M, Begusch H, Hearst JE. 1984. Nucleotide and deduced polypeptide sequences of the photosynthetic reaction-center, B870 antenna, and flanking polypeptides from R. capsulata. Cell 37:949-57.
    • (1984) Cell , vol.37 , pp. 949-957
    • Youvan, D.C.1    Bylina, E.J.2    Alberti, M.3    Begusch, H.4    Hearst, J.E.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.