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Volumn 96, Issue 10, 2006, Pages 1124-1133

Molecular characterization of Fusarium oxysporum and Fusarium commune isolates from a conifer nursery

Author keywords

Forest pathology; Molecular diagnostics; Phylogenetics

Indexed keywords

CONIFEROPHYTA; FUSARIUM; FUSARIUM COMMUNE; FUSARIUM OXYSPORUM; PSEUDOTSUGA; PSEUDOTSUGA MENZIESII;

EID: 33749246224     PISSN: 0031949X     EISSN: None     Source Type: Journal    
DOI: 10.1094/PHYTO-96-1124     Document Type: Article
Times cited : (54)

References (55)
  • 1
    • 0029662158 scopus 로고    scopus 로고
    • Relationships among pathogenic and nonpathogenic isolates of Fusarium oxysporum based on the partial sequence of the intergenic spacer region of the ribosomal DNA
    • Appel, D. J., and Gordon, T. R. 1996. Relationships among pathogenic and nonpathogenic isolates of Fusarium oxysporum based on the partial sequence of the intergenic spacer region of the ribosomal DNA. Mol. Plant-Microbe Interact. 9:125-138.
    • (1996) Mol. Plant-Microbe Interact. , vol.9 , pp. 125-138
    • Appel, D.J.1    Gordon, T.R.2
  • 3
    • 0033866820 scopus 로고    scopus 로고
    • Gene genealogies and AFLP analyses in the Fusarium oxysporum complex identify monophyletic and nonmonophyletic formae speciales causing wilt and rot disease
    • Baayen, R. P., O'Donnell, K., Bonants, P. J. M., Cigelnik, E., Kroon, L. P. N. M., Roebroeck, E. J. A., and Waalwijk, C. 2000. Gene genealogies and AFLP analyses in the Fusarium oxysporum complex identify monophyletic and nonmonophyletic formae speciales causing wilt and rot disease. Phytopathology 90:891-900.
    • (2000) Phytopathology , vol.90 , pp. 891-900
    • Baayen, R.P.1    O'Donnell, K.2    Bonants, P.J.M.3    Cigelnik, E.4    Kroon, L.P.N.M.5    Roebroeck, E.J.A.6    Waalwijk, C.7
  • 4
    • 0030838582 scopus 로고    scopus 로고
    • Genetic diversity in Fusarium oxysporum f. sp. dianthi and Fusarium redolens f. sp. dianthi
    • Baayen, R. P., van Dreven, F., Krijger, M. C., and Waalwijk, C. 1997. Genetic diversity in Fusarium oxysporum f. sp. dianthi and Fusarium redolens f. sp. dianthi. Eur. J. Plant Pathol. 103:395-408.
    • (1997) Eur. J. Plant Pathol. , vol.103 , pp. 395-408
    • Baayen, R.P.1    Van Dreven, F.2    Krijger, M.C.3    Waalwijk, C.4
  • 5
    • 0036202689 scopus 로고    scopus 로고
    • Genetic analysis of pathogenic and nonpathogenic Fusarium oxysporum from tomato plants
    • Bao, J. R., Fravel, D. R., O'Neill, N. R., Lazarovits, G., and van Berkum, P. 2002. Genetic analysis of pathogenic and nonpathogenic Fusarium oxysporum from tomato plants. Can. J. Bot. 80:271-279.
    • (2002) Can. J. Bot. , vol.80 , pp. 271-279
    • Bao, J.R.1    Fravel, D.R.2    O'Neill, N.R.3    Lazarovits, G.4    Van Berkum, P.5
  • 6
    • 19744375607 scopus 로고    scopus 로고
    • Pathogenic and genetic characterization of Algerian isolates of Fusarium oxysporum f. sp. lentis by RAPD and AFLP analysis
    • Belabid, L., Baum, M., Portas, Z., Bouznad, Z., and Eujayl, I. 2004. Pathogenic and genetic characterization of Algerian isolates of Fusarium oxysporum f. sp. lentis by RAPD and AFLP analysis. Afr. J. Biotech. 3:25-31.
    • (2004) Afr. J. Biotech. , vol.3 , pp. 25-31
    • Belabid, L.1    Baum, M.2    Portas, Z.3    Bouznad, Z.4    Eujayl, I.5
  • 7
    • 0036330277 scopus 로고    scopus 로고
    • Ability of nonpathogenic Fusarium oxysporum strain Fo47 to induce resistance against Pythium ultimum infection in cucumber
    • Benhamou, N., Carand, C., and Goulet, A. 2002. Ability of nonpathogenic Fusarium oxysporum strain Fo47 to induce resistance against Pythium ultimum infection in cucumber. Appl. Environ. Microbiol. 68:4044-4060.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 4044-4060
    • Benhamou, N.1    Carand, C.2    Goulet, A.3
  • 8
    • 0011155468 scopus 로고
    • Disease caused by Fusarium in forest nurseries
    • P. E. Nelson, T. A. Tousson, and R. J. Cook, eds. The Pennsylvania State University Press, University Park
    • Bloomberg, W. J. 1981. Disease caused by Fusarium in forest nurseries. Pages 178-187 in: Fusarium: Diseases, Biology and Taxonomy. P. E. Nelson, T. A. Tousson, and R. J. Cook, eds. The Pennsylvania State University Press, University Park.
    • (1981) Fusarium: Diseases, Biology and Taxonomy , pp. 178-187
    • Bloomberg, W.J.1
  • 9
    • 0030816742 scopus 로고    scopus 로고
    • Can three incongruence tests predict when data should be combined?
    • Cunningham, C. W. 1997. Can three incongruence tests predict when data should be combined? Mol. Biol. Evol. 14:733-740.
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 733-740
    • Cunningham, C.W.1
  • 11
    • 0028942889 scopus 로고
    • Primer sets developed to amplify conserved genes from filamentous ascomycetes are useful in differentiating Fusarium species associated with conifer
    • Donaldson, G. C., Ball, L. A., Axelrood, P. E., and Glass, N. L. 1995. Primer sets developed to amplify conserved genes from filamentous ascomycetes are useful in differentiating Fusarium species associated with conifer. Appl. Environ. Microbiol. 61:1331-1340.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 1331-1340
    • Donaldson, G.C.1    Ball, L.A.2    Axelrood, P.E.3    Glass, N.L.4
  • 12
    • 25444465883 scopus 로고    scopus 로고
    • Root diseases in bareroot and container nurseries of the Pacific Northwest: Epidemiology, management, and effects on outplanting performance
    • Dumroese, R. K., and James, R. L. 2005. Root diseases in bareroot and container nurseries of the Pacific Northwest: Epidemiology, management, and effects on outplanting performance. New Forest 30:185-202.
    • (2005) New Forest , vol.30 , pp. 185-202
    • Dumroese, R.K.1    James, R.L.2
  • 13
    • 84981566811 scopus 로고
    • Toxicity of methyl bromide to soil-borne fungi
    • Ebben, M. H., Gandy, G. D., and Spencer, D. M. 1983. Toxicity of methyl bromide to soil-borne fungi. Plant Pathol. 32:429-433.
    • (1983) Plant Pathol. , vol.32 , pp. 429-433
    • Ebben, M.H.1    Gandy, G.D.2    Spencer, D.M.3
  • 15
  • 16
    • 1842339270 scopus 로고    scopus 로고
    • Nonpathogenic Fusarium oxysporum strain Fo47 induces resistance to Fusarium wilt in tomato
    • Fuchs, J.-G., Moënne-Loccoz, Y., and Défago, G. 1997. Nonpathogenic Fusarium oxysporum strain Fo47 induces resistance to Fusarium wilt in tomato. Plant Dis. 81:492-496.
    • (1997) Plant Dis. , vol.81 , pp. 492-496
    • Fuchs, J.-G.1    Moënne-Loccoz, Y.2    Défago, G.3
  • 17
    • 0027580147 scopus 로고
    • ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rust
    • Gardes, M., and Bruns, T. D. 1993. ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rust. Mol. Ecol. 2:113-118.
    • (1993) Mol. Ecol. , vol.2 , pp. 113-118
    • Gardes, M.1    Bruns, T.D.2
  • 18
    • 0030614141 scopus 로고    scopus 로고
    • The evolutionary biology of Fusarium oxysporum
    • Gordon, T. R., and Martyn, R. D. 1997. The evolutionary biology of Fusarium oxysporum. Annu. Rev. Phytopathol. 35:111-128.
    • (1997) Annu. Rev. Phytopathol. , vol.35 , pp. 111-128
    • Gordon, T.R.1    Martyn, R.D.2
  • 19
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall, T. A. 1999. BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 41:95-98.
    • (1999) Nucleic Acids Symp. Ser. , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 20
    • 0012765351 scopus 로고
    • Effects of soil fumigation and cover crops on potential pathogens, microbial activity, nitrogen availability, and seedling quality in conifer nurseries
    • Hansen, E. M., Myrold, D. D., and Hamm, P. B. 1990. Effects of soil fumigation and cover crops on potential pathogens, microbial activity, nitrogen availability, and seedling quality in conifer nurseries. Phytopathology 80:698-704.
    • (1990) Phytopathology , vol.80 , pp. 698-704
    • Hansen, E.M.1    Myrold, D.D.2    Hamm, P.B.3
  • 22
    • 0036753377 scopus 로고    scopus 로고
    • Phylogenetics analyses of the Lyophylleae (Agaricales, Baxidiomycota) based on nuclear and mitochondrial rDNA sequences
    • Hofsetter, V., Clémençon, H., Vilgalys, R., and Moncalvo, J.-M. 2002. Phylogenetics analyses of the Lyophylleae (Agaricales, Baxidiomycota) based on nuclear and mitochondrial rDNA sequences. Mycol. Res. 106:1043-1059.
    • (2002) Mycol. Res. , vol.106 , pp. 1043-1059
    • Hofsetter, V.1    Clémençon, H.2    Vilgalys, R.3    Moncalvo, J.-M.4
  • 23
    • 0034849408 scopus 로고    scopus 로고
    • MrBayes: Bayesian inference of phylogenetic trees
    • Huelsenbeck, J. P., and Ronquist, F. 2001. MrBayes: Bayesian inference of phylogenetic trees. Biometrics 17:754-755.
    • (2001) Biometrics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 26
    • 0001486927 scopus 로고
    • Fusarium proliferation is a common, aggressive pathogen of container-grown conifer seedlings
    • Abstr.
    • James, R. L., Dumroese, R. K., and Wenny, D. L. 1995. Fusarium proliferation is a common, aggressive pathogen of container-grown conifer seedlings. (Abstr.) Phytopathology 85:1129.
    • (1995) Phytopathology , vol.85 , pp. 1129
    • James, R.L.1    Dumroese, R.K.2    Wenny, D.L.3
  • 27
  • 29
    • 0012820071 scopus 로고    scopus 로고
    • Virulence of Fusarium oxysporum on Douglas-fir germinants: Comparison of isolates from nursery soil and roots of healthy and diseased seedlings
    • Research Paper 781. A. Lilja and J. R. Sutherland, eds. Finnish Forest Research Institute, Helsinki, Finland
    • James, R. L., Perez, R., Dumroese, R. K., and Wenny, D. L. 2000. Virulence of Fusarium oxysporum on Douglas-fir germinants: Comparison of isolates from nursery soil and roots of healthy and diseased seedlings. Pages 49-64 in: Proc. Fourth Meeting of IUFRO Working Party S7.03-04 (Disease and Insects in Forest Nurseries). Research Paper 781. A. Lilja and J. R. Sutherland, eds. Finnish Forest Research Institute, Helsinki, Finland.
    • (2000) Proc. Fourth Meeting of IUFRO Working Party S7.03-04 (Disease and Insects in Forest Nurseries) , pp. 49-64
    • James, R.L.1    Perez, R.2    Dumroese, R.K.3    Wenny, D.L.4
  • 32
    • 0037314816 scopus 로고    scopus 로고
    • Genetic structure of Fennoscandian population of the threatened wood-decay fungus Fomitopsis rosea
    • Kauserud, H., and Schumacher, T. 2003. Genetic structure of Fennoscandian population of the threatened wood-decay fungus Fomitopsis rosea. Mycol. Res. 107:155-163.
    • (2003) Mycol. Res. , vol.107 , pp. 155-163
    • Kauserud, H.1    Schumacher, T.2
  • 33
    • 33749240616 scopus 로고    scopus 로고
    • Application of molecular genetic tools to studies of forest pathosystems
    • J. E. Lundquist and R. C. Hamelin, eds. The American Phytopathological Society, St. Paul, MN
    • Kim, M.-S., Klopfenstein, N. B., and Hamelin, R. C. 2005. Application of molecular genetic tools to studies of forest pathosystems. Pages 9-20 in: Forest Pathology-From Genes to Landscapes. J. E. Lundquist and R. C. Hamelin, eds. The American Phytopathological Society, St. Paul, MN.
    • (2005) Forest Pathology - From Genes to Landscapes , pp. 9-20
    • Kim, M.-S.1    Klopfenstein, N.B.2    Hamelin, R.C.3
  • 34
    • 33645031157 scopus 로고    scopus 로고
    • Characterization of North American Armillaria species: Genetic relationships determined from ribosomal DNA sequences and AFLP markers
    • Kim, M.-S., Klopfenstein, N. B., Hanna, J. W., and McDonald, G. I. 2006. Characterization of North American Armillaria species: Genetic relationships determined from ribosomal DNA sequences and AFLP markers. Forest Pathol. 36:145-164.
    • (2006) Forest Pathol. , vol.36 , pp. 145-164
    • Kim, M.-S.1    Klopfenstein, N.B.2    Hanna, J.W.3    McDonald, G.I.4
  • 35
    • 0030935003 scopus 로고    scopus 로고
    • Genetic diversity in the plant-pathogenic fungus Fusarium oxysporum
    • Kistler, H. C. 1997. Genetic diversity in the plant-pathogenic fungus Fusarium oxysporum. Phytopathology 87:474-479.
    • (1997) Phytopathology , vol.87 , pp. 474-479
    • Kistler, H.C.1
  • 36
    • 0025113547 scopus 로고
    • Variation in the ribosomal DNA repeat unit within single-oospore isolates of the genus Pythium
    • Martin, F. N. 1990. Variation in the ribosomal DNA repeat unit within single-oospore isolates of the genus Pythium. Genome 33:585-591.
    • (1990) Genome , vol.33 , pp. 585-591
    • Martin, F.N.1
  • 38
    • 0032908929 scopus 로고    scopus 로고
    • Biological and molecular characterization of Fusarium oxysporum f. sp. lycopersici divides race 1 isolates into separate virulence groups
    • Mes, J. J., Weststeijn, E. A., Jerlaar, F., Jambalk, J. W., Haring, M. A., and Cornelissen, B. J. C. 1999. Biological and molecular characterization of Fusarium oxysporum f. sp. lycopersici divides race 1 isolates into separate virulence groups. Phytopathology 89:156-160.
    • (1999) Phytopathology , vol.89 , pp. 156-160
    • Mes, J.J.1    Weststeijn, E.A.2    Jerlaar, F.3    Jambalk, J.W.4    Haring, M.A.5    Cornelissen, B.J.C.6
  • 39
    • 0242487488 scopus 로고    scopus 로고
    • Performance-based selection of likelihood models for phylogeny estimation
    • Minin, V., Abdo, Z., Joyce, P., and Sullivan, J. 2003. Performance-based selection of likelihood models for phylogeny estimation. Syst. Biol. 52:674-683.
    • (2003) Syst. Biol. , vol.52 , pp. 674-683
    • Minin, V.1    Abdo, Z.2    Joyce, P.3    Sullivan, J.4
  • 40
    • 0000545256 scopus 로고
    • Comparative toxicity of gaseous methyl bromide to ten soilborne phytopathogenic fungi
    • Munnecke, D. E., Bricker, J. L., and Kolbezen, M. J. 1978. Comparative toxicity of gaseous methyl bromide to ten soilborne phytopathogenic fungi. Phytopathology 68:1210-1216.
    • (1978) Phytopathology , vol.68 , pp. 1210-1216
    • Munnecke, D.E.1    Bricker, J.L.2    Kolbezen, M.J.3
  • 41
    • 0031872659 scopus 로고    scopus 로고
    • Pathogenic and genetic variation in the Japanese strains of Fusarium oxysporum f. sp. melonis
    • Namiki, F., Shiomi, T., Nishi, K., Kayamura, T., and Tsuge, T. 1998. Pathogenic and genetic variation in the Japanese strains of Fusarium oxysporum f. sp. melonis. Phytopathology 88:804-810.
    • (1998) Phytopathology , vol.88 , pp. 804-810
    • Namiki, F.1    Shiomi, T.2    Nishi, K.3    Kayamura, T.4    Tsuge, T.5
  • 43
    • 0036630072 scopus 로고    scopus 로고
    • Fusarium spp. and Pinus strobus seedlings: Root disease pathogens and taxa associated with seed
    • Ocamb, C. M., Juzwik, J., and Martin, F. B. 2002. Fusarium spp. and Pinus strobus seedlings: Root disease pathogens and taxa associated with seed. New Forests 24:67-69.
    • (2002) New Forests , vol.24 , pp. 67-69
    • Ocamb, C.M.1    Juzwik, J.2    Martin, F.B.3
  • 44
    • 0026806481 scopus 로고
    • Ribosomal DNA internal transcribed spacers are highly divergent in the phytopathogenic ascomycete Fusarium sambucinum (Gibberella pulicaris)
    • O'Donnell, K. 1992. Ribosomal DNA internal transcribed spacers are highly divergent in the phytopathogenic ascomycete Fusarium sambucinum (Gibberella pulicaris). Curr. Genet. 22:213-220.
    • (1992) Curr. Genet. , vol.22 , pp. 213-220
    • O'Donnell, K.1
  • 45
    • 0031065526 scopus 로고    scopus 로고
    • Two divergent intragenomic rDNA ITS2 types within a monophyletic lineage of the fungus Fusarium are nonorthologous
    • O'Donnell, K., and Cigelnik, E. 1997. Two divergent intragenomic rDNA ITS2 types within a monophyletic lineage of the fungus Fusarium are nonorthologous. Mol. Phylogenet. Evol. 7:103-116.
    • (1997) Mol. Phylogenet. Evol. , vol.7 , pp. 103-116
    • O'Donnell, K.1    Cigelnik, E.2
  • 46
    • 0032478185 scopus 로고    scopus 로고
    • Multiple evolutionary origins of the fungus causing Panama disease of banana: Concordant evidence from nuclear and mitochondrial gene genealogies
    • O'Donnell, K., Kistler, H. C., Cigelnik, E., and Ploetz, R. C. 1998. Multiple evolutionary origins of the fungus causing Panama disease of banana: Concordant evidence from nuclear and mitochondrial gene genealogies. Proc. Natl. Acad. Sci. USA 95:2044-2049.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 2044-2049
    • O'Donnell, K.1    Kistler, H.C.2    Cigelnik, E.3    Ploetz, R.C.4
  • 48
    • 0034350427 scopus 로고    scopus 로고
    • Gaps as characters in sequence-based phylogenetic analyses
    • Simmons, M. P., and Ochoterena. H. 2000. Gaps as characters in sequence-based phylogenetic analyses. Syst. Biol. 49:369-381.
    • (2000) Syst. Biol. , vol.49 , pp. 369-381
    • Simmons, M.P.1    Ochoterena, H.2
  • 49
    • 0141941638 scopus 로고    scopus 로고
    • Fusarium commune is a new species identified by morphological and molecular phylogenetic data
    • Skovgaard, K., Rosendahl, S., O'Donnell, K., and Hirenberh, H. I. 2003. Fusarium commune is a new species identified by morphological and molecular phylogenetic data. Mycologia 95:630-636.
    • (2003) Mycologia , vol.95 , pp. 630-636
    • Skovgaard, K.1    Rosendahl, S.2    O'Donnell, K.3    Hirenberh, H.I.4
  • 51
    • 33749256140 scopus 로고    scopus 로고
    • Molecular characterization of Fusarium oxysporum from tree nurseries: Tools for early detection of pathogens
    • Abstr.
    • Stewart, J. E., Kim, M.-S., James, R. L., Dumroese, R. K., and Klopfenstein, N. B. 2004. Molecular characterization of Fusarium oxysporum from tree nurseries: Tools for early detection of pathogens. (Abstr.) Phytopathology 94(suppl.):S99.
    • (2004) Phytopathology , vol.94 , Issue.SUPPL.
    • Stewart, J.E.1    Kim, M.-S.2    James, R.L.3    Dumroese, R.K.4    Klopfenstein, N.B.5
  • 52
    • 0032928955 scopus 로고    scopus 로고
    • Genetic diversity of Fusarium oxysporum isolates from cucumber: Differentiation by pathogenicity, vegetative compatibility and RAPD fingerprinting
    • Vakalounakis, D. J., and Fragkiadakis, G. A. 1999. Genetic diversity of Fusarium oxysporum isolates from cucumber: Differentiation by pathogenicity, vegetative compatibility and RAPD fingerprinting. Phytopathology 89:161-168.
    • (1999) Phytopathology , vol.89 , pp. 161-168
    • Vakalounakis, D.J.1    Fragkiadakis, G.A.2
  • 54
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA gene for phylogenetics
    • M. A. Innis, D. H. Gelfand, J. J., Sninsky, and T. J. White, eds. Academic Press, New York
    • White, T. J., Bruns, T., Lee, S., and Taylor, J. 1990. Amplification and direct sequencing of fungal ribosomal RNA gene for phylogenetics. Pages 315-322 in: PCR Protocols: A Guide to Methods and Applications. M. A. Innis, D. H. Gelfand, J. J., Sninsky, and T. J. White, eds. Academic Press, New York.
    • (1990) PCR Protocols: A Guide to Methods and Applications , pp. 315-322
    • White, T.J.1    Bruns, T.2    Lee, S.3    Taylor, J.4
  • 55
    • 0029849525 scopus 로고    scopus 로고
    • Characterization of Fusarium oxysporum f. sp. phaseoli by pathogenic races. VCGs, RFLPs, and RAPD
    • Woo, S. L., Zoina, A., Del Sorbo, G., Lorito, M., Nanni, B., Xala, F., and Noviello, C. 1996. Characterization of Fusarium oxysporum f. sp. phaseoli by pathogenic races. VCGs, RFLPs, and RAPD. Phytopathology 86:966-973.
    • (1996) Phytopathology , vol.86 , pp. 966-973
    • Woo, S.L.1    Zoina, A.2    Del Sorbo, G.3    Lorito, M.4    Nanni, B.5    Xala, F.6    Noviello, C.7


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