AFLP fingerprinting and conversion to sequence-tag site markers for the identification of Oncidium cultivars

Journal of Horticultural Science and Biotechnology

Volumn 81, Issue 5, 2006, Pages 791-796

  Chen, W H ^a   Tseng, I C ^b   Tsai, W C ^b   Chiang, M S ^c   Chen, Y H ^c,d   Chen, H H ^b  

^a University of Kaohsiung   (Taiwan)

^b NATIONAL CHENG KUNG UNIVERSITY   (Taiwan)

^c Taiwan Sugar Research Institute   (Taiwan)

^d Tainan District Agricultural Research and Extension Station   (Taiwan)

Author keywords

[No Author keywords available]

Indexed keywords

ONCIDIUM; ONCIDIUM GOWER RAMSEY; ORCHIDACEAE;

EID: 33749021067     PISSN: 14620316     EISSN: None     Source Type: Journal    
DOI: 10.1080/14620316.2006.11512139     Document Type: Article

References (19)

1. CAI, H. W., GAO, Z. S., YUYAMA, N. and OGAWA, N. (2003). Identification of AFLP markers closely linked to the rhm gene for resistance to Southern Corn Leaf Blight in maize by using bulked segregant analysis. Molecular Genetics and Genomics, 269, 299-303.
2. BRADEEN, J. M. and SIMON, P. W. (1998). Conversion of an AFLP fragment linked to the carrot Y2 locus to a simple, codominant, PCR-based marker form. Theoretical and Applied Genetics, 97, 960-967.
3. GUO, P. G., BAI, G. H. and SHANER, G. E. (2003). AFLP and STS tagging of a major QTL for Fusarium head blight resistance in wheat. Theoretical and Applied Genetics, 106, 1011-1017.
4. HORI, K., KOBAYASHI, T., SHIMIZU, A., SATO, K., TAKEDA, K. and KAWASAKI, S. (2003). Efficient construction of high-density linkage map and its application to QTL analysis in barley. Theoretical and Applied Genetics, 107, 806-813.
5. MATSUI, K., KIRYU, Y., KOMATSUDA, T., KURAUCHI, N., OHTANI, T. and TETSUKA, T. (2004). Identification of AFLP markers linked to non-seed shattering locus (sht1) in buckwheat and conversion to STS markers for marker-assisted selection. Genome, 47, 469-474.
6. MEKSEM, K., RUBEN, E., HYTEN, D., TRIWITAYAKORN, K. and LIGHTFOOT, D. A. (2001). Conversion of AFLP bands into high-throughput DNA markers. Molecular Genetics and Genomics, 265, 207-214.
7. NEGI, M. S., DEVIC, M., DELSENY, M. and LAKSHMIKUMARAN, M. (2000). Identification of AFLP fragments linked to seed coat colour in Brassica juncea and conversion to a SCAR marker for rapid selection. Theoretical and Applied Genetics, 101, 146-152.
8. PEJIC, I., AJMONE-MARSAN, P., MORGANTE, M., KOZUMPLICK, V., CASTIGLIONI, P., TARAMINO, G. and MOTTO, M. (1998). Comparative analysis of genetic similarity among maize inbred lines detected by RFLPs, RAPDs, SSRs, and AFLPs. Theoretical and Applied Genetics, 97, 1248-1255.
9. PRINS, R., GROENEWALD, J. Z., MARAIS, G. F., SNAPE, J. W. and KOEBNER, R. M. D. (2001). AFLP and STS tagging of Lr19, a gene conferring resistance to leaf rust in wheat. Theoretical and Applied Genetics, 103, 618-624.
10. RENGANAYAKI, K., READ, J. C. and FRITZ, A. K. (2001). Genetic diversity among Texas bluegrass genotypes (Poa arachnifera Torr.) revealed by AFLP and RAPD markers. Theoretical and Applied Genetics, 102, 1037-1045.
11. ROLDÁN-RUIZ, I., CALSYN, E., GILLILAND, T. J., COLL, R., VAN EIJK, M. J. T. and DE LOOSE, M. (2000). Estimating genetic conformity between related ryegrass (Lolium) varieties. 2. AFLP characterization. Molecular Breeding, 6, 593-602.
12. RUSSELL, J. R., FULLER, J. D., MACAULAY, M., HATZ, B. G., JAHOOR, A., POWELL, W. and WAUGH, R. (1997). Direct comparison of levels of genetic variation among barley accessions detected by RFLPs, AFLPs, SSRs and RAPDs. Theoretical and Applied Genetics, 95, 714-722.
13. SHAN, X., BLAKE, T. K. and TALBERT, L. E. (1999). Conversion of AFLP markers to sequence-specific PCR markers in barley and wheat. Theoretical and Applied Genetics, 98, 1072-1078.
14. SMITH, H., KOEBNER, D. and BOYD, A. (2002). The development of a STS marker linked to a yellow rust resistance derived from the wheat cultivar Moro. Theoretical and Applied Genetics, 104, 1278-1282.
15. TSAI, W. C., KUOH, C. S., CHUANG, M. H., CHEN, W. H. and CHEN, H. H. (2004). Four DEF-like MADS box genes displayed distinct floral morphogenetic roles in Phalaenopsis orchid. Plant and Cell Physiology, 45, 831-844.
16. VOLLRATH, D. (1997). DNA markers for physical mapping. In: Genome Analysis: A Laboratory Manual. Volume 4. Mapping Genomes. (Birren, B., Green, E. D., Hieter, P., Klapholz, S., Myers, R. M., Riethman, H. and Roskams, J., Eds.). Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, USA. 187-203.
17. VOS, P., HOGERS, R., BLEEKER, M., REIJANS, M., VAN DE LEE, T., HORNES, M., FRIJTERS, A., POT, J., PELEMAN, J., KUIPER, M., and ZABEAU, M. (1995). AFLP: a new technique for DNA fingerprinting. Nucleic Acids Research, 23, 4407-4414.
18. XU, D. H. and BAN, T. (2004). Conversion of AFLP markers associated with FHB resistance in wheat into STS markers with an extension-AFLP method. Genome, 47, 660-665.
19. XU, M., HUARACHA, E. and KORBAN, S. S. (2001). Development of sequence-characterized amplified regions (SCARs) from amplified fragment length polymorphism (AFLP) markers tightly linked to the Vf gene in apple. Genome, 44, 63-70.