메뉴 건너뛰기




Volumn 7, Issue , 2006, Pages

An annotated cDNA library of juvenile Euprymna scolopes with and without colonization by the symbiont Vibrio fischeri

(24)  Chun, Carlene K a   Scheetz, Todd E b,c   de Fatima Bonaldo, Maria e   Brown, Bartley c   Clemens, Anik f   Crookes Goodson, Wendy J a   Crouch, Keith b   DeMartini, Tad f   Eyestone, Mari b   Goodson, Michael S a   Janssens, Bernadette f   Kimbell, Jennifer L f   Koropatnick, Tanya A f   Kucaba, Tamara b   Smith, Christina e   Stewart, Jennifer J f   Tong, Deyan a   Troll, Joshua V a   Webster, Sarahrose b   Winhall Rice, Jane f   more..


Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA; CONTIG;

EID: 33749016050     PISSN: 14712164     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-7-154     Document Type: Article
Times cited : (44)

References (42)
  • 1
    • 0031933648 scopus 로고    scopus 로고
    • Nutritional interactions in insect-microbial symbioses: Aphids and their symbiotic bacteria Buchnera
    • Douglas AE: Nutritional interactions in insect-microbial symbioses: aphids and their symbiotic bacteria Buchnera. Annu Rev Entomol 1998, 43:17-37.
    • (1998) Annu Rev Entomol , vol.43 , pp. 17-37
    • Douglas, A.E.1
  • 2
    • 0036024611 scopus 로고    scopus 로고
    • Phylogenetic analysis of the human gut microbiota using 16S rDNA clone libraries and strictly anaerobic culture-based methods
    • Hayashi H, Sakamoto M, Benno Y: Phylogenetic analysis of the human gut microbiota using 16S rDNA clone libraries and strictly anaerobic culture-based methods. Microbiol Immunol 2002, 46(8):535-S48.
    • (2002) Microbiol Immunol , vol.46 , Issue.8 , pp. 535-548
    • Hayashi, H.1    Sakamoto, M.2    Benno, Y.3
  • 3
    • 0142136145 scopus 로고    scopus 로고
    • Phylogenetic diversity, abundance, and axial distribution of bacteria in the intestinal tract of two soil-feeding termites (Cubitermes spp.)
    • Schmitt-Wagner D, Friedrich MW, Wagner B, Brune A: Phylogenetic diversity, abundance, and axial distribution of bacteria in the intestinal tract of two soil-feeding termites (Cubitermes spp.). Appl Environ Microbiol 2003, 69(10):6007-6017.
    • (2003) Appl Environ Microbiol , vol.69 , Issue.10 , pp. 6007-6017
    • Schmitt-Wagner, D.1    Friedrich, M.W.2    Wagner, B.3    Brune, A.4
  • 4
    • 0142104396 scopus 로고    scopus 로고
    • Axial dynamics, stability, and interspecies similarity of bacterial community structure in the highly compartmentalized gut of soil-feeding termites (Cubitermes; spp.)
    • Schmitt-Wagner D, Friedrich MW, Wagner B, Brune A: Axial dynamics, stability, and interspecies similarity of bacterial community structure in the highly compartmentalized gut of soil-feeding termites (Cubitermes; spp.). Appl Environ Microbiol 2003, 69(10):6018-6024.
    • (2003) Appl Environ Microbiol , vol.69 , Issue.10 , pp. 6018-6024
    • Schmitt-Wagner, D.1    Friedrich, M.W.2    Wagner, B.3    Brune, A.4
  • 5
    • 0345869634 scopus 로고    scopus 로고
    • Census of the bacterial community of the gypsy moth larval midgut by using culturing and culture-independent methods
    • Broderick NA, Raffa, KF, Goodman RM, Handelsman J: Census of the bacterial community of the gypsy moth larval midgut by using culturing and culture-independent methods. Appl Environ Microbiol 2004, 70(1):293-300.
    • (2004) Appl Environ Microbiol , vol.70 , Issue.1 , pp. 293-300
    • Broderick, N.A.1    Raffa, K.F.2    Goodman, R.M.3    Handelsman, J.4
  • 6
    • 1842532897 scopus 로고    scopus 로고
    • Gnotobiotic zebrafish reveal evolutionarily conserved responses to the gut microbiota
    • Rawls JF, Samuel BS, Gordon JI: Gnotobiotic zebrafish reveal evolutionarily conserved responses to the gut microbiota. Poc Natl Acad Sci U S A 2004, 101(13):4596-4601.
    • (2004) Poc Natl Acad Sci U S A , vol.101 , Issue.13 , pp. 4596-4601
    • Rawls, J.F.1    Samuel, B.S.2    Gordon, J.I.3
  • 7
    • 0035793372 scopus 로고    scopus 로고
    • Molecular analysis of commensal host-microbial relationships in the intestine
    • Hooper LV, Wong MH, Thelin A, Hansson L, Falk PG, Gordon JI: Molecular analysis of commensal host-microbial relationships in the intestine. Science 2001, 291(5505):881-884.
    • (2001) Science , vol.291 , Issue.5505 , pp. 881-884
    • Hooper, L.V.1    Wong, M.H.2    Thelin, A.3    Hansson, L.4    Falk, P.G.5    Gordon, J.I.6
  • 11
    • 0002550364 scopus 로고    scopus 로고
    • Symbiosis of Aeromonas and Hirudo medicinalis, the medicinal leech
    • Graf J: Symbiosis of Aeromonas and Hirudo medicinalis, the medicinal leech. ASM New 2000, 66:147-153.
    • (2000) ASM New , vol.66 , pp. 147-153
    • Graf, J.1
  • 12
    • 0037509967 scopus 로고    scopus 로고
    • Early colonization events in the mutualistic association between Steinernema carpocapsae nematodes and Xenorhabdus nematophila bacteria
    • Martens EC, Heungens K, Goodrich-Blair H: Early colonization events in the mutualistic association between Steinernema carpocapsae nematodes and Xenorhabdus nematophila bacteria. J Bacteriol 2003, 185(10):3147-3154.
    • (2003) J Bacteriol , vol.185 , Issue.10 , pp. 3147-3154
    • Martens, E.C.1    Heungens, K.2    Goodrich-Blair, H.3
  • 13
    • 4344568725 scopus 로고    scopus 로고
    • The winnowing: Establishing the squid-Vibrio symbiosis
    • Nyholm SV, McFall-Ngai MJ: The winnowing: establishing the squid-Vibrio symbiosis. Nat Rev Microbiol 2004, 2(8):632-642.
    • (2004) Nat Rev Microbiol , vol.2 , Issue.8 , pp. 632-642
    • Nyholm, S.V.1    McFall-Ngai, M.J.2
  • 14
    • 0029837341 scopus 로고    scopus 로고
    • Lessons from a cooperative, bacterial-animal association: The Vibrio fischeri-Euprymna scolopes light organ symbiosis
    • Ruby EG: Lessons from a cooperative, bacterial-animal association: the Vibrio fischeri-Euprymna scolopes light organ symbiosis. Annu Rev Microbiol 1996, 50:591-624.
    • (1996) Annu Rev Microbiol , vol.50 , pp. 591-624
    • Ruby, E.G.1
  • 20
    • 25144466440 scopus 로고    scopus 로고
    • Genes preferentially expressed in bovine oocytes revealed by subtractive and suppressive hybridization
    • Pennetier S, Uzbekova S, Guyader-Joly C, Humblot P, Mermillod P, Dalbies-Tran R: Genes preferentially expressed in bovine oocytes revealed by subtractive and suppressive hybridization. Biol Reprod 2005, 73(4):713-720.
    • (2005) Biol Reprod , vol.73 , Issue.4 , pp. 713-720
    • Pennetier, S.1    Uzbekova, S.2    Guyader-Joly, C.3    Humblot, P.4    Mermillod, P.5    Dalbies-Tran, R.6
  • 22
    • 3042643735 scopus 로고    scopus 로고
    • Genome phylogenetic analysis based on extended gene contents
    • Gu X, Zhang H: Genome phylogenetic analysis based on extended gene contents. Mol Biol Evol 2004, 21(7):1401-1408.
    • (2004) Mol Biol Evol , vol.21 , Issue.7 , pp. 1401-1408
    • Gu, X.1    Zhang, H.2
  • 23
    • 0033823725 scopus 로고    scopus 로고
    • Alterations in the proteome of the Euprymna scolopes light organ in response to symbiotic Vibrio fischeri
    • Doino Lemus J, McFall-Ngai MJ: Alterations in the proteome of the Euprymna scolopes light organ in response to symbiotic Vibrio fischeri. Appl Environ Microbiol 2000, 66(9):4091-4097.
    • (2000) Appl Environ Microbiol , vol.66 , Issue.9 , pp. 4091-4097
    • Doino Lemus, J.1    McFall-Ngai, M.J.2
  • 25
    • 0032483028 scopus 로고    scopus 로고
    • Evolutionary parameters of the transcribed mammalian genome: An analysis of 2,820 orthologous rodent and human sequences
    • Makalowski W, Boguski MS: Evolutionary parameters of the transcribed mammalian genome: an analysis of 2,820 orthologous rodent and human sequences. Proc Natl Acad Sci U S A 1998, 95(16):9407-9412.
    • (1998) Proc Natl Acad Sci U S A , vol.95 , Issue.16 , pp. 9407-9412
    • Makalowski, W.1    Boguski, M.S.2
  • 27
    • 1642402194 scopus 로고    scopus 로고
    • Symbiont-Induced Changes in Host Actin during the Onset of a Beneficial Animal-Bacterial Association
    • Kimbell JR, McFall-Ngai MJ: Symbiont-Induced Changes in Host Actin during the Onset of a Beneficial Animal-Bacterial Association. Appl Environ Microbiol 2004, 70(3):1434-1441.
    • (2004) Appl Environ Microbiol , vol.70 , Issue.3 , pp. 1434-1441
    • Kimbell, J.R.1    McFall-Ngai, M.J.2
  • 28
    • 0030475227 scopus 로고    scopus 로고
    • A peroxidase related to the mammalian antimicrobial protein myeloperoxidase in the Euprymna-Vibrio mutualism
    • Weis VM, Small AL, McFall-Ngai MJ: A peroxidase related to the mammalian antimicrobial protein myeloperoxidase in the Euprymna-Vibrio mutualism. Proc Natl Acad Sci U S A 1996, 93(24):13683-13688.
    • (1996) Proc Natl Acad Sci U S A , vol.93 , Issue.24 , pp. 13683-13688
    • Weis, V.M.1    Small, A.L.2    McFall-Ngai, M.J.3
  • 29
    • 0000385535 scopus 로고
    • Enhanced Production of ALDH-Like Protein in the Bacterial Light Organ of the Sepiolid Squid Euprymna scolopes
    • Weis VM, Montgomery MK, McFall-Ngai MJ: Enhanced Production of ALDH-Like Protein in the Bacterial Light Organ of the Sepiolid Squid Euprymna scolopes. Biol Bull 1993, 184(3):309-321.
    • (1993) Biol Bull , vol.184 , Issue.3 , pp. 309-321
    • Weis, V.M.1    Montgomery, M.K.2    McFall-Ngai, M.J.3
  • 30
    • 8744311626 scopus 로고    scopus 로고
    • NO means 'yes' in the squid-vibrio symbiosis: Nitric oxide (NO) during the initial stages of a beneficial association
    • Davidson SK, Koropatnick TA, Kossmehl R, Sycuro L, McFall-Ngai MJ: NO means 'yes' in the squid-vibrio symbiosis: nitric oxide (NO) during the initial stages of a beneficial association. Cell Microbiol 2004, 6(12):1139-1151.
    • (2004) Cell Microbiol , vol.6 , Issue.12 , pp. 1139-1151
    • Davidson, S.K.1    Koropatnick, T.A.2    Kossmehl, R.3    Sycuro, L.4    McFall-Ngai, M.J.5
  • 32
    • 0029201070 scopus 로고
    • A Transient Exposure to Symbiosis-Competent Bacteria Induces Light Organ Morphogenesis in the Host Squid
    • Doino Lemus J, McFall-Ngai M: A Transient Exposure to Symbiosis-Competent Bacteria Induces Light Organ Morphogenesis in the Host Squid. Biol Bull 1995, 189:347-355.
    • (1995) Biol Bull , vol.189 , pp. 347-355
    • Doino Lemus, J.1    McFall-Ngai, M.2
  • 33
    • 0345051044 scopus 로고    scopus 로고
    • Normalization and subtraction: Two approaches to facilitate gene discovery
    • Bonaldo MF, Lennon G, Soares MB: Normalization and subtraction: two approaches to facilitate gene discovery. Genome Res 1996, 6(9):791-806.
    • (1996) Genome Res , vol.6 , Issue.9 , pp. 791-806
    • Bonaldo, M.F.1    Lennon, G.2    Soares, M.B.3
  • 34
    • 0003035304 scopus 로고    scopus 로고
    • Construction and screening of normalized cDNA libraries
    • In Edited by: Birren B, Green ED, Klapholz S, Myers R, Roskams J. New York, Cold Spring Harbor Press
    • Soares MB, Bonaldo MF: Construction and screening of normalized cDNA libraries. In Genome Analysis: A Laboratory Manual Edited by: Birren B, Green ED, Klapholz S, Myers R, Roskams J. New York, Cold Spring Harbor Press; 1998:49-157.
    • (1998) Genome Analysis: A Laboratory Manual , pp. 49-157
    • Soares, M.B.1    Bonaldo, M.F.2
  • 36
    • 84872261872 scopus 로고    scopus 로고
    • ABI 3730xl dRhodamine Terminator Sequencing Protocol
    • ABI 3730xl dRhodamine Terminator Sequencing Protocol [http://ratest.eng.uiowa.edu/localdocs/sequencing_protocol.html]
  • 37
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. I. Accuracy assessment
    • Ewing B, Hillier L, Wendl MC, Green P: Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res 1998, 8(3):175-185.
    • (1998) Genome Res , vol.8 , Issue.3 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    Wendl, M.C.3    Green, P.4
  • 40
    • 3142737247 scopus 로고    scopus 로고
    • Informatics for efficient EST-based gene discovery in normalized and subtracted cDNA libraries
    • In Edited by: River WL Edge, NJ, World Scientific
    • Scheetz TE, Casavant TL: Informatics for efficient EST-based gene discovery in normalized and subtracted cDNA libraries. In The Practical Bioinformatician Edited by: River WL Edge, NJ, World Scientific; 2004.
    • (2004) The Practical Bioinformatician
    • Scheetz, T.E.1    Casavant, T.L.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.